RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
NUP98-201ENST00000324932 ARID3AQ99856 593 aa18.44■□□□□ 0.54
NUP98-201ENST00000324932 GNL2Q13823 731 aaKnown RBP18.44■□□□□ 0.54
NUP98-201ENST00000324932 TSHZ2Q9NRE2 1034 aa18.44■□□□□ 0.54
NUP98-201ENST00000324932 TPM4P67936 248 aa18.42■□□□□ 0.54
NUP98-201ENST00000324932 GOLGA6L1Q8N7Z2 621 aa18.42■□□□□ 0.54
NUP98-201ENST00000324932 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
NUP98-201ENST00000324932 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
NUP98-201ENST00000324932 NOC3LQ8WTT2 800 aaKnown RBP18.39■□□□□ 0.53
NUP98-201ENST00000324932 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
NUP98-201ENST00000324932 USP35Q9P2H5 1018 aa18.39■□□□□ 0.53
NUP98-201ENST00000324932 CALD1Q05682 793 aaKnown RBP18.39■□□□□ 0.53
NUP98-201ENST00000324932 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
NUP98-201ENST00000324932 MORC1Q86VD1 984 aa18.38■□□□□ 0.53
NUP98-201ENST00000324932 KTN1Q86UP2 1357 aaKnown RBP18.37■□□□□ 0.53
NUP98-201ENST00000324932 NPHP1O15259 732 aa18.37■□□□□ 0.53
NUP98-201ENST00000324932 PMFBP1Q8TBY8 1022 aa18.37■□□□□ 0.53
NUP98-201ENST00000324932 CCDC34Q96HJ3 373 aa18.36■□□□□ 0.53
NUP98-201ENST00000324932 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
NUP98-201ENST00000324932 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
NUP98-201ENST00000324932 CLSTN1O94985 981 aa18.35■□□□□ 0.53
NUP98-201ENST00000324932 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
NUP98-201ENST00000324932 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
NUP98-201ENST00000324932 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
NUP98-201ENST00000324932 RALBP1Q15311 655 aa18.32■□□□□ 0.52
NUP98-201ENST00000324932 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
NUP98-201ENST00000324932 PHF14O94880 888 aa18.31■□□□□ 0.52
NUP98-201ENST00000324932 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
NUP98-201ENST00000324932 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
NUP98-201ENST00000324932 APBB1O00213 710 aa18.31■□□□□ 0.52
NUP98-201ENST00000324932 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
NUP98-201ENST00000324932 DDX11L8A8MPP1 907 aa18.29■□□□□ 0.52
NUP98-201ENST00000324932 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
NUP98-201ENST00000324932 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.52
NUP98-201ENST00000324932 A0A0U1RQG5 324 aaPredicted RBP18.26■□□□□ 0.51
NUP98-201ENST00000324932 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
NUP98-201ENST00000324932 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
NUP98-201ENST00000324932 TPM3P06753 285 aa18.24■□□□□ 0.51
NUP98-201ENST00000324932 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
NUP98-201ENST00000324932 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
NUP98-201ENST00000324932 SETQ01105 290 aaPredicted RBP18.24■□□□□ 0.51
NUP98-201ENST00000324932 HMMRO75330 724 aa18.23■□□□□ 0.51
NUP98-201ENST00000324932 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
NUP98-201ENST00000324932 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
NUP98-201ENST00000324932 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
NUP98-201ENST00000324932 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
NUP98-201ENST00000324932 ST18O60284 1047 aa18.21■□□□□ 0.51
NUP98-201ENST00000324932 U2AF1L5P0DN76 240 aaPredicted RBP18.21■□□□□ 0.51
NUP98-201ENST00000324932 U2AF1Q01081 240 aaKnown RBP eCLIP18.21■□□□□ 0.511e-7■■□□□ 11.9
NUP98-201ENST00000324932 GSE1Q14687 1217 aa18.21■□□□□ 0.51
NUP98-201ENST00000324932 SKOR2Q2VWA4 1001 aaPredicted RBP18.21■□□□□ 0.51
NUP98-201ENST00000324932 KANK1Q14678 1352 aa18.2■□□□□ 0.5
NUP98-201ENST00000324932 GPATCH3Q96I76 525 aa18.2■□□□□ 0.5
NUP98-201ENST00000324932 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
NUP98-201ENST00000324932 KIF3AQ9Y496 699 aa18.19■□□□□ 0.5
NUP98-201ENST00000324932 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
NUP98-201ENST00000324932 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
NUP98-201ENST00000324932 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
NUP98-201ENST00000324932 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
NUP98-201ENST00000324932 GPS2Q13227 327 aa18.16■□□□□ 0.5
NUP98-201ENST00000324932 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
NUP98-201ENST00000324932 TRIM6-TRIM34B2RNG4 842 aa18.15■□□□□ 0.5
NUP98-201ENST00000324932 KIF16BQ96L93 1317 aa18.14■□□□□ 0.5
NUP98-201ENST00000324932 DDX49Q9Y6V7 483 aaKnown RBP18.14■□□□□ 0.49
NUP98-201ENST00000324932 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
NUP98-201ENST00000324932 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
NUP98-201ENST00000324932 SOX12O15370 315 aa18.13■□□□□ 0.49
NUP98-201ENST00000324932 ATP6V1DQ9Y5K8 247 aa18.13■□□□□ 0.49
NUP98-201ENST00000324932 RASSF8Q8NHQ8 419 aa18.12■□□□□ 0.49
NUP98-201ENST00000324932 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
NUP98-201ENST00000324932 NLRP13Q86W25 1043 aa18.12■□□□□ 0.49
NUP98-201ENST00000324932 CEP89Q96ST8 783 aa18.12■□□□□ 0.49
NUP98-201ENST00000324932 SF3A1Q15459 793 aaKnown RBP18.1■□□□□ 0.49
NUP98-201ENST00000324932 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
NUP98-201ENST00000324932 PDE4AP27815 886 aa18.1■□□□□ 0.49
NUP98-201ENST00000324932 GORABQ5T7V8 394 aa18.1■□□□□ 0.49
NUP98-201ENST00000324932 PKD2Q13563 968 aa18.1■□□□□ 0.49
NUP98-201ENST00000324932 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
NUP98-201ENST00000324932 ZNF771Q7L3S4 317 aaPredicted RBP18.09■□□□□ 0.49
NUP98-201ENST00000324932 CHMP4CQ96CF2 233 aa18.09■□□□□ 0.49
NUP98-201ENST00000324932 NOL8Q76FK4 1167 aaKnown RBP18.09■□□□□ 0.49
NUP98-201ENST00000324932 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
NUP98-201ENST00000324932 GOLGA6L19H0YKK7 550 aa18.09■□□□□ 0.49
NUP98-201ENST00000324932 CLUAP1Q96AJ1 413 aa18.08■□□□□ 0.48
NUP98-201ENST00000324932 FANCIQ9NVI1 1328 aa18.08■□□□□ 0.48
NUP98-201ENST00000324932 ROCK2O75116 1388 aaKnown RBP18.08■□□□□ 0.48
NUP98-201ENST00000324932 BECN2A8MW95 431 aa18.07■□□□□ 0.48
NUP98-201ENST00000324932 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
NUP98-201ENST00000324932 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
NUP98-201ENST00000324932 TSR1Q2NL82 804 aaKnown RBP18.06■□□□□ 0.48
NUP98-201ENST00000324932 CREBRFQ8IUR6 639 aa18.05■□□□□ 0.48
NUP98-201ENST00000324932 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
NUP98-201ENST00000324932 TPM1P09493 284 aa18.04■□□□□ 0.48
NUP98-201ENST00000324932 TEX35Q5T0J7 233 aa18.04■□□□□ 0.48
NUP98-201ENST00000324932 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
NUP98-201ENST00000324932 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
NUP98-201ENST00000324932 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.03■□□□□ 0.48
NUP98-201ENST00000324932 FOXD4L5Q5VV16 416 aaPredicted RBP18.02■□□□□ 0.48
NUP98-201ENST00000324932 FOXD4L4Q8WXT5 416 aaPredicted RBP18.02■□□□□ 0.48
NUP98-201ENST00000324932 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms