RNA–Protein interactions for RNA: ENST00000321949.12

CRTC1-201, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC1, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-201ENST00000321949 KDM6BO15054 1643 aa24.75■■□□□ 1.55
CRTC1-201ENST00000321949 ARHGEF11O15085 1522 aa24.75■■□□□ 1.55
CRTC1-201ENST00000321949 MPHOSPH9Q99550 1183 aa24.75■■□□□ 1.55
CRTC1-201ENST00000321949 L3MBTL2Q969R5 705 aa24.74■■□□□ 1.55
CRTC1-201ENST00000321949 C11orf95C9JLR9 678 aaPredicted RBP24.72■■□□□ 1.55
CRTC1-201ENST00000321949 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
CRTC1-201ENST00000321949 NUP160Q12769 1436 aa24.71■■□□□ 1.55
CRTC1-201ENST00000321949 TCOF1Q13428 1488 aaKnown RBP24.69■■□□□ 1.54
CRTC1-201ENST00000321949 FBLN2P98095 1184 aa24.66■■□□□ 1.54
CRTC1-201ENST00000321949 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
CRTC1-201ENST00000321949 GCC2Q8IWJ2 1684 aa24.66■■□□□ 1.54
CRTC1-201ENST00000321949 FAM9BQ8IZU0 186 aa24.66■■□□□ 1.54
CRTC1-201ENST00000321949 MSH5O43196 834 aa24.65■■□□□ 1.54
CRTC1-201ENST00000321949 CNTLNQ9NXG0 1405 aa24.65■■□□□ 1.54
CRTC1-201ENST00000321949 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
CRTC1-201ENST00000321949 CDK11AQ9UQ88 783 aaPredicted RBP24.62■■□□□ 1.53
CRTC1-201ENST00000321949 RAPGEF6Q8TEU7 1601 aa24.61■■□□□ 1.53
CRTC1-201ENST00000321949 NBPF8Q3BBV2 869 aa24.61■■□□□ 1.53
CRTC1-201ENST00000321949 CCDC7Q96M83 1385 aa24.6■■□□□ 1.53
CRTC1-201ENST00000321949 AKNAQ7Z591 1439 aa24.6■■□□□ 1.53
CRTC1-201ENST00000321949 MRS2Q9HD23 443 aa24.59■■□□□ 1.53
CRTC1-201ENST00000321949 CARMIL2Q6F5E8 1435 aa24.58■■□□□ 1.53
CRTC1-201ENST00000321949 NCOA1Q15788 1441 aa24.57■■□□□ 1.52
CRTC1-201ENST00000321949 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
CRTC1-201ENST00000321949 NUP153P49790 1475 aaKnown RBP24.57■■□□□ 1.52
CRTC1-201ENST00000321949 ZNF644Q9H582 1327 aaPredicted RBP24.56■■□□□ 1.52
CRTC1-201ENST00000321949 JPH4Q96JJ6 628 aa24.56■■□□□ 1.52
CRTC1-201ENST00000321949 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
CRTC1-201ENST00000321949 CNGB1Q14028 1251 aaPredicted RBP24.53■■□□□ 1.52
CRTC1-201ENST00000321949 SLC4A1APQ9BWU0 796 aaKnown RBP24.52■■□□□ 1.52
CRTC1-201ENST00000321949 KIF7Q2M1P5 1343 aa24.51■■□□□ 1.51
CRTC1-201ENST00000321949 PPP4R2Q9NY27 417 aa24.51■■□□□ 1.51
CRTC1-201ENST00000321949 RPRD2Q5VT52 1461 aaKnown RBP24.5■■□□□ 1.51
CRTC1-201ENST00000321949 DAPK1P53355 1430 aa24.5■■□□□ 1.51
CRTC1-201ENST00000321949 B4GALNT3Q6L9W6 998 aa24.48■■□□□ 1.51
CRTC1-201ENST00000321949 ABCC5O15440 1437 aa24.46■■□□□ 1.51
CRTC1-201ENST00000321949 TEX14Q8IWB6 1497 aa24.46■■□□□ 1.51
CRTC1-201ENST00000321949 FANCIQ9NVI1 1328 aa24.46■■□□□ 1.51
CRTC1-201ENST00000321949 ZBED9Q6R2W3 1325 aa24.46■■□□□ 1.51
CRTC1-201ENST00000321949 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.5
CRTC1-201ENST00000321949 ERICH6BQ5W0A0 696 aa24.44■■□□□ 1.5
CRTC1-201ENST00000321949 CHD1O14646 1710 aa24.44■■□□□ 1.5
CRTC1-201ENST00000321949 SPATA31E1Q6ZUB1 1445 aa24.43■■□□□ 1.5
CRTC1-201ENST00000321949 ROCK1Q13464 1354 aa24.43■■□□□ 1.5
CRTC1-201ENST00000321949 POLR3GLQ9BT43 218 aa24.42■■□□□ 1.5
CRTC1-201ENST00000321949 BCL11AQ9H165 835 aa24.42■■□□□ 1.5
CRTC1-201ENST00000321949 ZNF326Q5BKZ1 582 aaKnown RBP24.4■■□□□ 1.5
CRTC1-201ENST00000321949 ABCA8O94911 1581 aa24.39■■□□□ 1.5
CRTC1-201ENST00000321949 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
CRTC1-201ENST00000321949 SENP3-EIF4A1A0A087X0R7 540 aa24.37■■□□□ 1.49
CRTC1-201ENST00000321949 ERICH6Q7L0X2 663 aa24.37■■□□□ 1.49
CRTC1-201ENST00000321949 DNMT1P26358 1616 aaKnown RBP24.36■■□□□ 1.49
CRTC1-201ENST00000321949 PRG4Q92954 1404 aaPredicted RBP24.35■■□□□ 1.49
CRTC1-201ENST00000321949 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.49
CRTC1-201ENST00000321949 ZNF777Q9ULD5 760 aaPredicted RBP24.32■■□□□ 1.48
CRTC1-201ENST00000321949 SHROOM2Q13796 1616 aa24.31■■□□□ 1.48
CRTC1-201ENST00000321949 PZPP20742 1482 aa24.3■■□□□ 1.48
CRTC1-201ENST00000321949 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
CRTC1-201ENST00000321949 DHX29Q7Z478 1369 aaKnown RBP24.28■■□□□ 1.48
CRTC1-201ENST00000321949 USP47Q96K76 1375 aa24.27■■□□□ 1.48
CRTC1-201ENST00000321949 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
CRTC1-201ENST00000321949 PTPRGP23470 1445 aa24.27■■□□□ 1.48
CRTC1-201ENST00000321949 PKD2Q13563 968 aa24.26■■□□□ 1.47
CRTC1-201ENST00000321949 ATP10BO94823 1461 aa24.25■■□□□ 1.47
CRTC1-201ENST00000321949 KIF14Q15058 1648 aa24.24■■□□□ 1.47
CRTC1-201ENST00000321949 POLR1AO95602 1720 aaPredicted RBP24.23■■□□□ 1.47
CRTC1-201ENST00000321949 CAMSAP2Q08AD1 1489 aa24.23■■□□□ 1.47
CRTC1-201ENST00000321949 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
CRTC1-201ENST00000321949 GPATCH8Q9UKJ3 1502 aaKnown RBP24.21■■□□□ 1.47
CRTC1-201ENST00000321949 SMG6Q86US8 1419 aaKnown RBP24.2■■□□□ 1.47
CRTC1-201ENST00000321949 KIAA1107Q9UPP5 1409 aa24.2■■□□□ 1.47
CRTC1-201ENST00000321949 MBD5Q9P267 1494 aa24.2■■□□□ 1.46
CRTC1-201ENST00000321949 PLEKHD1A6NEE1 506 aa24.19■■□□□ 1.46
CRTC1-201ENST00000321949 NUDCQ9Y266 331 aa24.19■■□□□ 1.46
CRTC1-201ENST00000321949 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
CRTC1-201ENST00000321949 ABCC10Q5T3U5 1492 aa24.14■■□□□ 1.45
CRTC1-201ENST00000321949 TMC1Q8TDI8 760 aa24.13■■□□□ 1.45
CRTC1-201ENST00000321949 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
CRTC1-201ENST00000321949 CCDC136Q96JN2 1154 aa24.13■■□□□ 1.45
CRTC1-201ENST00000321949 KDM2AQ9Y2K7 1162 aa24.13■■□□□ 1.45
CRTC1-201ENST00000321949 CARD11Q9BXL7 1154 aa24.12■■□□□ 1.45
CRTC1-201ENST00000321949 ANKRD30AQ9BXX3 1397 aa24.11■■□□□ 1.45
CRTC1-201ENST00000321949 CDC42BPAQ5VT25 1732 aa24.11■■□□□ 1.45
CRTC1-201ENST00000321949 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
CRTC1-201ENST00000321949 KDM5CP41229 1560 aa24.1■■□□□ 1.45
CRTC1-201ENST00000321949 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
CRTC1-201ENST00000321949 NUP155O75694 1391 aa24.09■■□□□ 1.45
CRTC1-201ENST00000321949 RNF123Q5XPI4 1314 aa24.09■■□□□ 1.45
CRTC1-201ENST00000321949 ADGBQ8N7X0 1667 aa24.07■■□□□ 1.44
CRTC1-201ENST00000321949 ADGRL2O95490 1459 aa24.07■■□□□ 1.44
CRTC1-201ENST00000321949 ST20-MTHFSA0A0A6YYL1 179 aa24.07■■□□□ 1.44
CRTC1-201ENST00000321949 CROCC2H7BZ55 1655 aa24.06■■□□□ 1.44
CRTC1-201ENST00000321949 ARID4BQ4LE39 1312 aaPredicted RBP24.06■■□□□ 1.44
CRTC1-201ENST00000321949 PAK3O75914 559 aaPredicted RBP24.06■■□□□ 1.44
CRTC1-201ENST00000321949 ABCC2Q92887 1545 aa24.05■■□□□ 1.44
CRTC1-201ENST00000321949 NOP58Q9Y2X3 529 aaKnown RBP24.04■■□□□ 1.44
CRTC1-201ENST00000321949 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
CRTC1-201ENST00000321949 RALGAPBQ86X10 1494 aa24.01■■□□□ 1.43
CRTC1-201ENST00000321949 ROCK2O75116 1388 aaKnown RBP24.01■■□□□ 1.43
CRTC1-201ENST00000321949 SALL2Q9Y467 1007 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms