RNA–Protein interactions for RNA: ENST00000319725.9

FUBP3-201, Transcript of far upstream element binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUBP3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3-201ENST00000319725 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
FUBP3-201ENST00000319725 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
FUBP3-201ENST00000319725 MSH5O43196 834 aa27.81■■■□□ 2.04
FUBP3-201ENST00000319725 EPRSP07814 1512 aaKnown RBP27.79■■■□□ 2.04
FUBP3-201ENST00000319725 TARBP1Q13395 1621 aaKnown RBP27.79■■■□□ 2.04
FUBP3-201ENST00000319725 CCDC7Q96M83 1385 aa27.76■■■□□ 2.03
FUBP3-201ENST00000319725 THOC2Q8NI27 1593 aaKnown RBP27.76■■■□□ 2.03
FUBP3-201ENST00000319725 ERICH6Q7L0X2 663 aa27.76■■■□□ 2.03
FUBP3-201ENST00000319725 KIF7Q2M1P5 1343 aa27.74■■■□□ 2.03
FUBP3-201ENST00000319725 CNTLNQ9NXG0 1405 aa27.74■■■□□ 2.03
FUBP3-201ENST00000319725 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
FUBP3-201ENST00000319725 KDM2AQ9Y2K7 1162 aa27.7■■■□□ 2.03
FUBP3-201ENST00000319725 CFDP1Q9UEE9 299 aaPredicted RBP27.69■■■□□ 2.02
FUBP3-201ENST00000319725 SALL2Q9Y467 1007 aaPredicted RBP27.66■■■□□ 2.02
FUBP3-201ENST00000319725 HECW1Q76N89 1606 aa27.64■■■□□ 2.02
FUBP3-201ENST00000319725 IQGAP2Q13576 1575 aa27.64■■■□□ 2.01
FUBP3-201ENST00000319725 ANKRD30BQ9BXX2 1392 aa27.63■■■□□ 2.01
FUBP3-201ENST00000319725 PKD2Q13563 968 aa27.63■■■□□ 2.01
FUBP3-201ENST00000319725 PPP4R2Q9NY27 417 aa27.63■■■□□ 2.01
FUBP3-201ENST00000319725 DAPK1P53355 1430 aa27.62■■■□□ 2.01
FUBP3-201ENST00000319725 ARHGEF11O15085 1522 aa27.61■■■□□ 2.01
FUBP3-201ENST00000319725 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
FUBP3-201ENST00000319725 ABCC5O15440 1437 aa27.61■■■□□ 2.01
FUBP3-201ENST00000319725 TCOF1Q13428 1488 aaKnown RBP27.6■■■□□ 2.01
FUBP3-201ENST00000319725 NCOA1Q15788 1441 aa27.59■■■□□ 2.01
FUBP3-201ENST00000319725 PRG4Q92954 1404 aaPredicted RBP27.59■■■□□ 2.01
FUBP3-201ENST00000319725 IFT140Q96RY7 1462 aa27.57■■■□□ 2
FUBP3-201ENST00000319725 MIA2Q96PC5 1412 aa27.55■■■□□ 2
FUBP3-201ENST00000319725 ADAMTS12P58397 1594 aa27.54■■■□□ 2
FUBP3-201ENST00000319725 GCC2Q8IWJ2 1684 aa27.53■■■□□ 2
FUBP3-201ENST00000319725 AKNAQ7Z591 1439 aa27.53■■■□□ 2
FUBP3-201ENST00000319725 ZBED9Q6R2W3 1325 aa27.52■■■□□ 2
FUBP3-201ENST00000319725 WDR62O43379 1518 aa27.51■■■□□ 2
FUBP3-201ENST00000319725 RPRD2Q5VT52 1461 aaKnown RBP27.51■■□□□ 1.99
FUBP3-201ENST00000319725 BCL11AQ9H165 835 aa27.49■■□□□ 1.99
FUBP3-201ENST00000319725 USP47Q96K76 1375 aa27.48■■□□□ 1.99
FUBP3-201ENST00000319725 TMC1Q8TDI8 760 aa27.47■■□□□ 1.99
FUBP3-201ENST00000319725 CARD11Q9BXL7 1154 aa27.47■■□□□ 1.99
FUBP3-201ENST00000319725 TEX14Q8IWB6 1497 aa27.46■■□□□ 1.99
FUBP3-201ENST00000319725 NUP153P49790 1475 aaKnown RBP27.45■■□□□ 1.99
FUBP3-201ENST00000319725 PLB1Q6P1J6 1458 aa27.43■■□□□ 1.98
FUBP3-201ENST00000319725 RGL3Q3MIN7 710 aa27.42■■□□□ 1.98
FUBP3-201ENST00000319725 DCAF11Q8TEB1 546 aa27.42■■□□□ 1.98
FUBP3-201ENST00000319725 CCDC136Q96JN2 1154 aa27.41■■□□□ 1.98
FUBP3-201ENST00000319725 EIF4G3O43432 1585 aaKnown RBP27.4■■□□□ 1.98
FUBP3-201ENST00000319725 GRIN2AQ12879 1464 aa27.4■■□□□ 1.98
FUBP3-201ENST00000319725 NBR1Q14596 966 aa27.4■■□□□ 1.98
FUBP3-201ENST00000319725 NUP155O75694 1391 aa27.39■■□□□ 1.98
FUBP3-201ENST00000319725 ST20-MTHFSA0A0A6YYL1 179 aa27.39■■□□□ 1.98
FUBP3-201ENST00000319725 HNRNPMP52272 730 aaKnown RBP eCLIP27.39■■□□□ 1.973e-8■□□□□ 11.1
FUBP3-201ENST00000319725 JPH4Q96JJ6 628 aa27.39■■□□□ 1.97
FUBP3-201ENST00000319725 DISP1Q96F81 1524 aa27.37■■□□□ 1.97
FUBP3-201ENST00000319725 KIAA0586Q9BVV6 1533 aa27.37■■□□□ 1.97
FUBP3-201ENST00000319725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.37■■□□□ 1.978e-8■■□□□ 14.5
FUBP3-201ENST00000319725 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
FUBP3-201ENST00000319725 FANCIQ9NVI1 1328 aa27.36■■□□□ 1.97
FUBP3-201ENST00000319725 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
FUBP3-201ENST00000319725 PZPP20742 1482 aa27.35■■□□□ 1.97
FUBP3-201ENST00000319725 CAMSAP2Q08AD1 1489 aa27.35■■□□□ 1.97
FUBP3-201ENST00000319725 PLEKHD1A6NEE1 506 aa27.32■■□□□ 1.96
FUBP3-201ENST00000319725 NUDCQ9Y266 331 aa27.31■■□□□ 1.96
FUBP3-201ENST00000319725 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
FUBP3-201ENST00000319725 DNMT1P26358 1616 aaKnown RBP27.3■■□□□ 1.96
FUBP3-201ENST00000319725 TSPY4P0CV99 314 aa27.3■■□□□ 1.96
FUBP3-201ENST00000319725 TSPY10P0CW01 314 aa27.3■■□□□ 1.96
FUBP3-201ENST00000319725 KIAA0556O60303 1618 aa27.28■■□□□ 1.96
FUBP3-201ENST00000319725 KIAA1107Q9UPP5 1409 aa27.28■■□□□ 1.96
FUBP3-201ENST00000319725 TROQ12816 1431 aaPredicted RBP27.27■■□□□ 1.96
FUBP3-201ENST00000319725 NPM2Q86SE8 214 aaKnown RBP27.27■■□□□ 1.96
FUBP3-201ENST00000319725 ANKRD30AQ9BXX3 1397 aa27.27■■□□□ 1.96
FUBP3-201ENST00000319725 ANKRD50Q9ULJ7 1429 aa27.27■■□□□ 1.96
FUBP3-201ENST00000319725 PAK3O75914 559 aaPredicted RBP27.26■■□□□ 1.95
FUBP3-201ENST00000319725 ERICH6BQ5W0A0 696 aa27.26■■□□□ 1.95
FUBP3-201ENST00000319725 GPATCH8Q9UKJ3 1502 aaKnown RBP27.25■■□□□ 1.95
FUBP3-201ENST00000319725 RAPGEF6Q8TEU7 1601 aa27.25■■□□□ 1.95
FUBP3-201ENST00000319725 PNISRQ8TF01 805 aaKnown RBP27.24■■□□□ 1.95
FUBP3-201ENST00000319725 KIF14Q15058 1648 aa27.24■■□□□ 1.95
FUBP3-201ENST00000319725 BCORL1Q5H9F3 1711 aa27.22■■□□□ 1.95
FUBP3-201ENST00000319725 CC2D1BQ5T0F9 858 aaKnown RBP27.21■■□□□ 1.95
FUBP3-201ENST00000319725 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
FUBP3-201ENST00000319725 NBPF1Q3BBV0 1214 aa27.18■■□□□ 1.94
FUBP3-201ENST00000319725 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
FUBP3-201ENST00000319725 MAGI1Q96QZ7 1491 aaPredicted RBP27.17■■□□□ 1.94
FUBP3-201ENST00000319725 ROCK2O75116 1388 aaKnown RBP27.15■■□□□ 1.94
FUBP3-201ENST00000319725 SMG6Q86US8 1419 aaKnown RBP27.15■■□□□ 1.94
FUBP3-201ENST00000319725 CARMIL2Q6F5E8 1435 aa27.15■■□□□ 1.94
FUBP3-201ENST00000319725 EXOC6Q8TAG9 804 aa27.14■■□□□ 1.94
FUBP3-201ENST00000319725 NOP58Q9Y2X3 529 aaKnown RBP27.14■■□□□ 1.94
FUBP3-201ENST00000319725 SKAP1Q86WV1 359 aa27.12■■□□□ 1.93
FUBP3-201ENST00000319725 CDCA7LQ96GN5 454 aa27.12■■□□□ 1.93
FUBP3-201ENST00000319725 PLIN1O60240 522 aa27.11■■□□□ 1.93
FUBP3-201ENST00000319725 C9orf84Q5VXU9 1444 aa27.11■■□□□ 1.93
FUBP3-201ENST00000319725 KIF15Q9NS87 1388 aa27.1■■□□□ 1.93
FUBP3-201ENST00000319725 ANP32AP39687 249 aaKnown RBP27.07■■□□□ 1.92
FUBP3-201ENST00000319725 MBD5Q9P267 1494 aa27.05■■□□□ 1.92
FUBP3-201ENST00000319725 MYBBP1AQ9BQG0 1328 aaKnown RBP27.05■■□□□ 1.92
FUBP3-201ENST00000319725 DEKP35659 375 aaKnown RBP27.05■■□□□ 1.92
FUBP3-201ENST00000319725 RCAN3Q9UKA8 241 aa27.02■■□□□ 1.92
FUBP3-201ENST00000319725 KDM5CP41229 1560 aa27■■□□□ 1.91
FUBP3-201ENST00000319725 RRP1P56182 461 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms