RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
GRAMD1A-201ENST00000317991 HECW1Q76N89 1606 aa30.43■■■□□ 2.46
GRAMD1A-201ENST00000317991 NBR1Q14596 966 aa30.43■■■□□ 2.46
GRAMD1A-201ENST00000317991 NOP58Q9Y2X3 529 aaKnown RBP30.42■■■□□ 2.46
GRAMD1A-201ENST00000317991 KIF7Q2M1P5 1343 aa30.42■■■□□ 2.46
GRAMD1A-201ENST00000317991 TDRD9Q8NDG6 1382 aaKnown RBP30.42■■■□□ 2.46
GRAMD1A-201ENST00000317991 SENP3-EIF4A1A0A087X0R7 540 aa30.41■■■□□ 2.46
GRAMD1A-201ENST00000317991 AKNAQ7Z591 1439 aa30.4■■■□□ 2.46
GRAMD1A-201ENST00000317991 GCC2Q8IWJ2 1684 aa30.38■■■□□ 2.45
GRAMD1A-201ENST00000317991 ARHGEF11O15085 1522 aa30.38■■■□□ 2.45
GRAMD1A-201ENST00000317991 MYT1LQ9UL68 1186 aa30.38■■■□□ 2.45
GRAMD1A-201ENST00000317991 ARID3CA6NKF2 412 aa30.37■■■□□ 2.45
GRAMD1A-201ENST00000317991 TCOF1Q13428 1488 aaKnown RBP30.34■■■□□ 2.45
GRAMD1A-201ENST00000317991 THOC2Q8NI27 1593 aaKnown RBP30.31■■■□□ 2.44
GRAMD1A-201ENST00000317991 ANKRD30BQ9BXX2 1392 aa30.29■■■□□ 2.44
GRAMD1A-201ENST00000317991 SPATA31E1Q6ZUB1 1445 aa30.29■■■□□ 2.44
GRAMD1A-201ENST00000317991 POLR3GLQ9BT43 218 aa30.28■■■□□ 2.44
GRAMD1A-201ENST00000317991 CCDC136Q96JN2 1154 aa30.27■■■□□ 2.44
GRAMD1A-201ENST00000317991 SMG6Q86US8 1419 aaKnown RBP30.26■■■□□ 2.43
GRAMD1A-201ENST00000317991 RPRD2Q5VT52 1461 aaKnown RBP30.25■■■□□ 2.43
GRAMD1A-201ENST00000317991 WDR62O43379 1518 aa30.25■■■□□ 2.43
GRAMD1A-201ENST00000317991 NUDCQ9Y266 331 aa30.24■■■□□ 2.43
GRAMD1A-201ENST00000317991 TEX14Q8IWB6 1497 aa30.24■■■□□ 2.43
GRAMD1A-201ENST00000317991 TARBP1Q13395 1621 aaKnown RBP30.24■■■□□ 2.43
GRAMD1A-201ENST00000317991 GAPVD1Q14C86 1478 aa30.21■■■□□ 2.43
GRAMD1A-201ENST00000317991 SLC4A1APQ9BWU0 796 aaKnown RBP30.2■■■□□ 2.43
GRAMD1A-201ENST00000317991 CDK13Q14004 1512 aaKnown RBP30.18■■■□□ 2.42
GRAMD1A-201ENST00000317991 DHX29Q7Z478 1369 aaKnown RBP30.18■■■□□ 2.42
GRAMD1A-201ENST00000317991 RNF123Q5XPI4 1314 aa30.17■■■□□ 2.42
GRAMD1A-201ENST00000317991 IPO9Q96P70 1041 aaKnown RBP30.16■■■□□ 2.42
GRAMD1A-201ENST00000317991 EPRSP07814 1512 aaKnown RBP30.15■■■□□ 2.42
GRAMD1A-201ENST00000317991 ANP32AP39687 249 aaKnown RBP30.15■■■□□ 2.42
GRAMD1A-201ENST00000317991 ABCA5Q8WWZ7 1642 aa30.15■■■□□ 2.42
GRAMD1A-201ENST00000317991 MIA2Q96PC5 1412 aa30.14■■■□□ 2.42
GRAMD1A-201ENST00000317991 ZNF644Q9H582 1327 aaPredicted RBP30.14■■■□□ 2.42
GRAMD1A-201ENST00000317991 ZNF326Q5BKZ1 582 aaKnown RBP30.14■■■□□ 2.42
GRAMD1A-201ENST00000317991 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
GRAMD1A-201ENST00000317991 POLR1AO95602 1720 aaPredicted RBP30.1■■■□□ 2.41
GRAMD1A-201ENST00000317991 ZBTB47Q9UFB7 747 aaPredicted RBP30.09■■■□□ 2.41
GRAMD1A-201ENST00000317991 DAPK1P53355 1430 aa30.08■■■□□ 2.41
GRAMD1A-201ENST00000317991 PNISRQ8TF01 805 aaKnown RBP30.05■■■□□ 2.4
GRAMD1A-201ENST00000317991 ABCC5O15440 1437 aa30.05■■■□□ 2.4
GRAMD1A-201ENST00000317991 BCORL1Q5H9F3 1711 aa30.04■■■□□ 2.4
GRAMD1A-201ENST00000317991 USP47Q96K76 1375 aa30.03■■■□□ 2.4
GRAMD1A-201ENST00000317991 IFT140Q96RY7 1462 aa30.03■■■□□ 2.4
GRAMD1A-201ENST00000317991 ROCK1Q13464 1354 aa30.02■■■□□ 2.4
GRAMD1A-201ENST00000317991 TMC1Q8TDI8 760 aa30.01■■■□□ 2.39
GRAMD1A-201ENST00000317991 RTL5Q5HYW3 569 aaPredicted RBP29.99■■■□□ 2.39
GRAMD1A-201ENST00000317991 NPM2Q86SE8 214 aaKnown RBP29.97■■■□□ 2.39
GRAMD1A-201ENST00000317991 PBRM1Q86U86 1689 aa29.94■■■□□ 2.38
GRAMD1A-201ENST00000317991 PZPP20742 1482 aa29.93■■■□□ 2.38
GRAMD1A-201ENST00000317991 EXOC6Q8TAG9 804 aa29.92■■■□□ 2.38
GRAMD1A-201ENST00000317991 DNMT1P26358 1616 aaKnown RBP29.91■■■□□ 2.38
GRAMD1A-201ENST00000317991 SALL2Q9Y467 1007 aaPredicted RBP29.9■■■□□ 2.38
GRAMD1A-201ENST00000317991 MBD5Q9P267 1494 aa29.89■■■□□ 2.38
GRAMD1A-201ENST00000317991 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
GRAMD1A-201ENST00000317991 IQGAP2Q13576 1575 aa29.88■■■□□ 2.37
GRAMD1A-201ENST00000317991 PKD2Q13563 968 aa29.87■■■□□ 2.37
GRAMD1A-201ENST00000317991 RRP1P56182 461 aaKnown RBP29.86■■■□□ 2.37
GRAMD1A-201ENST00000317991 LAS1LQ9Y4W2 734 aaKnown RBP29.83■■■□□ 2.37
GRAMD1A-201ENST00000317991 KDM5CP41229 1560 aa29.83■■■□□ 2.37
GRAMD1A-201ENST00000317991 CARD11Q9BXL7 1154 aa29.81■■■□□ 2.36
GRAMD1A-201ENST00000317991 ARID4BQ4LE39 1312 aaPredicted RBP29.8■■■□□ 2.36
GRAMD1A-201ENST00000317991 LRPPRCP42704 1394 aaKnown RBP29.8■■■□□ 2.36
GRAMD1A-201ENST00000317991 KIAA1107Q9UPP5 1409 aa29.8■■■□□ 2.36
GRAMD1A-201ENST00000317991 PDE4AP27815 886 aa29.79■■■□□ 2.36
GRAMD1A-201ENST00000317991 IL27Q8NEV9 243 aa29.79■■■□□ 2.36
GRAMD1A-201ENST00000317991 ZNF777Q9ULD5 760 aaPredicted RBP29.79■■■□□ 2.36
GRAMD1A-201ENST00000317991 RCAN3Q9UKA8 241 aa29.78■■■□□ 2.36
GRAMD1A-201ENST00000317991 ADAMTS12P58397 1594 aa29.77■■■□□ 2.36
GRAMD1A-201ENST00000317991 KIF15Q9NS87 1388 aa29.77■■■□□ 2.36
GRAMD1A-201ENST00000317991 ST20-MTHFSA0A0A6YYL1 179 aa29.77■■■□□ 2.36
GRAMD1A-201ENST00000317991 KDM2AQ9Y2K7 1162 aa29.76■■■□□ 2.35
GRAMD1A-201ENST00000317991 TCERG1O14776 1098 aaKnown RBP29.75■■■□□ 2.35
GRAMD1A-201ENST00000317991 ANO8Q9HCE9 1232 aaPredicted RBP29.75■■■□□ 2.35
GRAMD1A-201ENST00000317991 KIF14Q15058 1648 aa29.75■■■□□ 2.35
GRAMD1A-201ENST00000317991 MYBBP1AQ9BQG0 1328 aaKnown RBP29.74■■■□□ 2.35
GRAMD1A-201ENST00000317991 CFDP1Q9UEE9 299 aaPredicted RBP29.74■■■□□ 2.35
GRAMD1A-201ENST00000317991 ROCK2O75116 1388 aaKnown RBP29.74■■■□□ 2.35
GRAMD1A-201ENST00000317991 NEFMP07197 916 aa29.72■■■□□ 2.35
GRAMD1A-201ENST00000317991 BRD4O60885 1362 aaPredicted RBP29.72■■■□□ 2.35
GRAMD1A-201ENST00000317991 SKAP1Q86WV1 359 aa29.71■■■□□ 2.35
GRAMD1A-201ENST00000317991 BACH2Q9BYV9 841 aa29.71■■■□□ 2.35
GRAMD1A-201ENST00000317991 NUP153P49790 1475 aaKnown RBP29.71■■■□□ 2.35
GRAMD1A-201ENST00000317991 FBLN2P98095 1184 aa29.7■■■□□ 2.34
GRAMD1A-201ENST00000317991 RTN4Q9NQC3 1192 aaKnown RBP29.7■■■□□ 2.34
GRAMD1A-201ENST00000317991 CDCA7LQ96GN5 454 aa29.69■■■□□ 2.34
GRAMD1A-201ENST00000317991 PRG4Q92954 1404 aaPredicted RBP29.69■■■□□ 2.34
GRAMD1A-201ENST00000317991 CAMSAP2Q08AD1 1489 aa29.69■■■□□ 2.34
GRAMD1A-201ENST00000317991 RALBP1Q15311 655 aa29.67■■■□□ 2.34
GRAMD1A-201ENST00000317991 PLIN1O60240 522 aa29.67■■■□□ 2.34
GRAMD1A-201ENST00000317991 RALGAPBQ86X10 1494 aa29.66■■■□□ 2.34
GRAMD1A-201ENST00000317991 UHRF1BP1Q6BDS2 1440 aa29.63■■■□□ 2.33
GRAMD1A-201ENST00000317991 DCAF11Q8TEB1 546 aa29.61■■■□□ 2.33
GRAMD1A-201ENST00000317991 DISP1Q96F81 1524 aa29.6■■■□□ 2.33
GRAMD1A-201ENST00000317991 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
GRAMD1A-201ENST00000317991 NUP155O75694 1391 aa29.59■■■□□ 2.33
GRAMD1A-201ENST00000317991 MS4A1P11836 297 aa29.58■■■□□ 2.33
GRAMD1A-201ENST00000317991 PRKCSHP14314 528 aaPredicted RBP29.58■■■□□ 2.33
GRAMD1A-201ENST00000317991 ANKRD50Q9ULJ7 1429 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms