RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 MAGI1Q96QZ7 1491 aaPredicted RBP10.04□□□□□ -0.8
CDHR3-201ENST00000317716 HSPA5P11021 654 aaKnown RBP10.03□□□□□ -0.8
CDHR3-201ENST00000317716 RGS3P49796 1198 aa10.03□□□□□ -0.8
CDHR3-201ENST00000317716 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
CDHR3-201ENST00000317716 IPO9Q96P70 1041 aaKnown RBP10.02□□□□□ -0.81
CDHR3-201ENST00000317716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.81
CDHR3-201ENST00000317716 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
CDHR3-201ENST00000317716 PPP1R15AO75807 674 aaPredicted RBP10.01□□□□□ -0.81
CDHR3-201ENST00000317716 CFDP1Q9UEE9 299 aaPredicted RBP10.01□□□□□ -0.81
CDHR3-201ENST00000317716 ARAP1Q96P48 1450 aa10.01□□□□□ -0.81
CDHR3-201ENST00000317716 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
CDHR3-201ENST00000317716 PBRM1Q86U86 1689 aa10□□□□□ -0.81
CDHR3-201ENST00000317716 ARHGAP35Q9NRY4 1499 aa10□□□□□ -0.81
CDHR3-201ENST00000317716 MLECQ14165 292 aa9.99□□□□□ -0.81
CDHR3-201ENST00000317716 PLB1Q6P1J6 1458 aa9.99□□□□□ -0.81
CDHR3-201ENST00000317716 NAP1L5Q96NT1 182 aaPredicted RBP9.98□□□□□ -0.81
CDHR3-201ENST00000317716 ABCA5Q8WWZ7 1642 aa9.98□□□□□ -0.81
CDHR3-201ENST00000317716 KIAA0586Q9BVV6 1533 aa9.98□□□□□ -0.81
CDHR3-201ENST00000317716 PPM1GO15355 546 aaPredicted RBP9.98□□□□□ -0.81
CDHR3-201ENST00000317716 ADAMTS12P58397 1594 aa9.97□□□□□ -0.81
CDHR3-201ENST00000317716 IQGAP2Q13576 1575 aa9.97□□□□□ -0.81
CDHR3-201ENST00000317716 KIF21BO75037 1637 aa9.96□□□□□ -0.81
CDHR3-201ENST00000317716 GLIPR1L2Q4G1C9 344 aa9.96□□□□□ -0.82
CDHR3-201ENST00000317716 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
CDHR3-201ENST00000317716 ZNF644Q9H582 1327 aaPredicted RBP9.96□□□□□ -0.82
CDHR3-201ENST00000317716 CHD1O14646 1710 aa9.96□□□□□ -0.82
CDHR3-201ENST00000317716 HNRNPMP52272 730 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDHR3-201ENST00000317716 CCDC184Q52MB2 194 aa9.96□□□□□ -0.82
CDHR3-201ENST00000317716 BRPF3Q9ULD4 1205 aa9.96□□□□□ -0.82
CDHR3-201ENST00000317716 FMN1Q68DA7 1419 aa9.95□□□□□ -0.82
CDHR3-201ENST00000317716 SETD5Q9C0A6 1442 aa9.95□□□□□ -0.82
CDHR3-201ENST00000317716 CUL7Q14999 1698 aa9.95□□□□□ -0.82
CDHR3-201ENST00000317716 CEP170Q5SW79 1584 aa9.93□□□□□ -0.82
CDHR3-201ENST00000317716 ERCC6L2Q5T890 1561 aa9.92□□□□□ -0.82
CDHR3-201ENST00000317716 CDK13Q14004 1512 aaKnown RBP9.92□□□□□ -0.82
CDHR3-201ENST00000317716 TSPY4P0CV99 314 aa9.92□□□□□ -0.82
CDHR3-201ENST00000317716 TSPY10P0CW01 314 aa9.92□□□□□ -0.82
CDHR3-201ENST00000317716 PLIN1O60240 522 aa9.92□□□□□ -0.82
CDHR3-201ENST00000317716 DDRGK1Q96HY6 314 aa9.92□□□□□ -0.82
CDHR3-201ENST00000317716 SLKQ9H2G2 1235 aaPredicted RBP9.92□□□□□ -0.82
CDHR3-201ENST00000317716 GZF1Q9H116 711 aaPredicted RBP9.91□□□□□ -0.82
CDHR3-201ENST00000317716 ARID3AQ99856 593 aa9.91□□□□□ -0.82
CDHR3-201ENST00000317716 EXOC6Q8TAG9 804 aa9.9□□□□□ -0.82
CDHR3-201ENST00000317716 ERICH6BQ5W0A0 696 aa9.9□□□□□ -0.82
CDHR3-201ENST00000317716 HSP90AA1P07900 732 aaKnown RBP9.89□□□□□ -0.83
CDHR3-201ENST00000317716 RGL3Q3MIN7 710 aa9.89□□□□□ -0.83
CDHR3-201ENST00000317716 SKAP1Q86WV1 359 aa9.89□□□□□ -0.83
CDHR3-201ENST00000317716 CC2D1BQ5T0F9 858 aaKnown RBP9.89□□□□□ -0.83
CDHR3-201ENST00000317716 CHGAP10645 457 aaKnown RBP9.88□□□□□ -0.83
CDHR3-201ENST00000317716 PDE4AP27815 886 aa9.88□□□□□ -0.83
CDHR3-201ENST00000317716 WDR97A6NE52 1622 aa9.87□□□□□ -0.83
CDHR3-201ENST00000317716 NUP160Q12769 1436 aa9.87□□□□□ -0.83
CDHR3-201ENST00000317716 RAPGEF3O95398 923 aa9.87□□□□□ -0.83
CDHR3-201ENST00000317716 DNAJC5Q9H3Z4 198 aa9.87□□□□□ -0.83
CDHR3-201ENST00000317716 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
CDHR3-201ENST00000317716 NUDCQ9Y266 331 aa9.87□□□□□ -0.83
CDHR3-201ENST00000317716 UPF2Q9HAU5 1272 aaKnown RBP9.87□□□□□ -0.83
CDHR3-201ENST00000317716 AFAP1Q8N556 730 aa9.86□□□□□ -0.83
CDHR3-201ENST00000317716 L3MBTL2Q969R5 705 aa9.86□□□□□ -0.83
CDHR3-201ENST00000317716 UACAQ9BZF9 1416 aa9.86□□□□□ -0.83
CDHR3-201ENST00000317716 GGT6Q6P531 493 aa9.86□□□□□ -0.83
CDHR3-201ENST00000317716 RCAN3Q9UKA8 241 aa9.85□□□□□ -0.83
CDHR3-201ENST00000317716 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
CDHR3-201ENST00000317716 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
CDHR3-201ENST00000317716 ESF1Q9H501 851 aaKnown RBP9.85□□□□□ -0.83
CDHR3-201ENST00000317716 ZBTB7CA1YPR0 619 aa9.85□□□□□ -0.83
CDHR3-201ENST00000317716 WDR43Q15061 677 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDHR3-201ENST00000317716 CARD11Q9BXL7 1154 aa9.85□□□□□ -0.83
CDHR3-201ENST00000317716 EFCAB2Q5VUJ9 269 aa9.84□□□□□ -0.83
CDHR3-201ENST00000317716 GSE1Q14687 1217 aa9.84□□□□□ -0.83
CDHR3-201ENST00000317716 DISP1Q96F81 1524 aa9.83□□□□□ -0.84
CDHR3-201ENST00000317716 AKNAQ7Z591 1439 aa9.83□□□□□ -0.84
CDHR3-201ENST00000317716 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.82□□□□□ -0.84
CDHR3-201ENST00000317716 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
CDHR3-201ENST00000317716 TCERG1O14776 1098 aaKnown RBP9.82□□□□□ -0.84
CDHR3-201ENST00000317716 CTTNBP2Q8WZ74 1663 aa9.82□□□□□ -0.84
CDHR3-201ENST00000317716 PCF11O94913 1555 aaKnown RBP9.82□□□□□ -0.84
CDHR3-201ENST00000317716 TPRNQ4KMQ1 711 aa9.82□□□□□ -0.84
CDHR3-201ENST00000317716 FRAT1Q92837 279 aaPredicted RBP9.82□□□□□ -0.84
CDHR3-201ENST00000317716 TRIM44Q96DX7 344 aaPredicted RBP9.82□□□□□ -0.84
CDHR3-201ENST00000317716 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
CDHR3-201ENST00000317716 PHLDB1Q86UU1 1377 aa9.81□□□□□ -0.84
CDHR3-201ENST00000317716 ZBED9Q6R2W3 1325 aa9.8□□□□□ -0.84
CDHR3-201ENST00000317716 CASKIN1Q8WXD9 1431 aa9.8□□□□□ -0.84
CDHR3-201ENST00000317716 BECN1Q14457 450 aa9.79□□□□□ -0.84
CDHR3-201ENST00000317716 NFKBIBQ15653 356 aa9.79□□□□□ -0.84
CDHR3-201ENST00000317716 EPRSP07814 1512 aaKnown RBP9.79□□□□□ -0.84
CDHR3-201ENST00000317716 ANP32BQ92688 251 aaKnown RBP9.79□□□□□ -0.84
CDHR3-201ENST00000317716 KIAA0556O60303 1618 aa9.78□□□□□ -0.84
CDHR3-201ENST00000317716 CCDC18Q5T9S5 1454 aa9.78□□□□□ -0.84
CDHR3-201ENST00000317716 NCLP19338 710 aaKnown RBP9.78□□□□□ -0.84
CDHR3-201ENST00000317716 PNNQ9H307 717 aaKnown RBP9.78□□□□□ -0.84
CDHR3-201ENST00000317716 ATP10BO94823 1461 aa9.77□□□□□ -0.84
CDHR3-201ENST00000317716 KIF3BO15066 747 aa9.77□□□□□ -0.84
CDHR3-201ENST00000317716 CRBNQ96SW2 442 aa9.77□□□□□ -0.85
CDHR3-201ENST00000317716 EFCAB5A4FU69 1503 aa9.77□□□□□ -0.85
CDHR3-201ENST00000317716 MPHOSPH9Q99550 1183 aa9.77□□□□□ -0.85
CDHR3-201ENST00000317716 FRAT2O75474 233 aaPredicted RBP9.76□□□□□ -0.85
CDHR3-201ENST00000317716 TNNT2P45379 298 aaPredicted RBP9.76□□□□□ -0.85
CDHR3-201ENST00000317716 NUP153P49790 1475 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms