RNA–Protein interactions for RNA: ENST00000317501.7

NTRK3-201, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene NTRK3, Length 3,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-201ENST00000317501 CCDC136Q96JN2 1154 aa11.29□□□□□ -0.6
NTRK3-201ENST00000317501 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
NTRK3-201ENST00000317501 KDM6BO15054 1643 aa11.27□□□□□ -0.6
NTRK3-201ENST00000317501 TEX14Q8IWB6 1497 aa11.27□□□□□ -0.61
NTRK3-201ENST00000317501 RPRD2Q5VT52 1461 aaKnown RBP11.27□□□□□ -0.61
NTRK3-201ENST00000317501 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
NTRK3-201ENST00000317501 KIF7Q2M1P5 1343 aa11.26□□□□□ -0.61
NTRK3-201ENST00000317501 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
NTRK3-201ENST00000317501 MIA2Q96PC5 1412 aa11.25□□□□□ -0.61
NTRK3-201ENST00000317501 WASHC2CQ9Y4E1 1318 aa11.25□□□□□ -0.61
NTRK3-201ENST00000317501 DHX29Q7Z478 1369 aaKnown RBP11.25□□□□□ -0.61
NTRK3-201ENST00000317501 L3MBTL2Q969R5 705 aa11.25□□□□□ -0.61
NTRK3-201ENST00000317501 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
NTRK3-201ENST00000317501 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
NTRK3-201ENST00000317501 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
NTRK3-201ENST00000317501 MPHOSPH9Q99550 1183 aa11.22□□□□□ -0.61
NTRK3-201ENST00000317501 ANKRD30BQ9BXX2 1392 aa11.22□□□□□ -0.61
NTRK3-201ENST00000317501 MAGI3Q5TCQ9 1506 aa11.21□□□□□ -0.61
NTRK3-201ENST00000317501 ARID4BQ4LE39 1312 aaPredicted RBP11.21□□□□□ -0.62
NTRK3-201ENST00000317501 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.62
NTRK3-201ENST00000317501 MS4A1P11836 297 aa11.2□□□□□ -0.62
NTRK3-201ENST00000317501 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
NTRK3-201ENST00000317501 BCORL1Q5H9F3 1711 aa11.2□□□□□ -0.62
NTRK3-201ENST00000317501 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
NTRK3-201ENST00000317501 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
NTRK3-201ENST00000317501 KIF14Q15058 1648 aa11.18□□□□□ -0.62
NTRK3-201ENST00000317501 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
NTRK3-201ENST00000317501 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
NTRK3-201ENST00000317501 NEFMP07197 916 aa11.18□□□□□ -0.62
NTRK3-201ENST00000317501 LRPPRCP42704 1394 aaKnown RBP11.17□□□□□ -0.62
NTRK3-201ENST00000317501 KDM5CP41229 1560 aa11.17□□□□□ -0.62
NTRK3-201ENST00000317501 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
NTRK3-201ENST00000317501 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
NTRK3-201ENST00000317501 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
NTRK3-201ENST00000317501 PDE4AP27815 886 aa11.16□□□□□ -0.62
NTRK3-201ENST00000317501 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
NTRK3-201ENST00000317501 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
NTRK3-201ENST00000317501 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
NTRK3-201ENST00000317501 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
NTRK3-201ENST00000317501 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.62
NTRK3-201ENST00000317501 RRP1P56182 461 aaKnown RBP11.15□□□□□ -0.62
NTRK3-201ENST00000317501 UBE2Q2Q8WVN8 375 aa11.14□□□□□ -0.63
NTRK3-201ENST00000317501 NESP48681 1621 aa11.14□□□□□ -0.63
NTRK3-201ENST00000317501 E9PCH4 1651 aa11.13□□□□□ -0.63
NTRK3-201ENST00000317501 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
NTRK3-201ENST00000317501 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
NTRK3-201ENST00000317501 BRD4O60885 1362 aaPredicted RBP11.13□□□□□ -0.63
NTRK3-201ENST00000317501 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
NTRK3-201ENST00000317501 DAPK1P53355 1430 aa11.11□□□□□ -0.63
NTRK3-201ENST00000317501 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
NTRK3-201ENST00000317501 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
NTRK3-201ENST00000317501 USP47Q96K76 1375 aa11.11□□□□□ -0.63
NTRK3-201ENST00000317501 KIF15Q9NS87 1388 aa11.11□□□□□ -0.63
NTRK3-201ENST00000317501 EXOC6Q8TAG9 804 aa11.1□□□□□ -0.63
NTRK3-201ENST00000317501 EPRSP07814 1512 aaKnown RBP11.1□□□□□ -0.63
NTRK3-201ENST00000317501 GSE1Q14687 1217 aa11.1□□□□□ -0.63
NTRK3-201ENST00000317501 PDE3BQ13370 1112 aa11.1□□□□□ -0.63
NTRK3-201ENST00000317501 FOXD1Q16676 465 aa11.09□□□□□ -0.63
NTRK3-201ENST00000317501 TMC1Q8TDI8 760 aa11.09□□□□□ -0.63
NTRK3-201ENST00000317501 UHRF1BP1Q6BDS2 1440 aa11.09□□□□□ -0.63
NTRK3-201ENST00000317501 LAMC3Q9Y6N6 1575 aa11.09□□□□□ -0.63
NTRK3-201ENST00000317501 PZPP20742 1482 aa11.09□□□□□ -0.63
NTRK3-201ENST00000317501 ADGBQ8N7X0 1667 aa11.09□□□□□ -0.63
NTRK3-201ENST00000317501 ZMYM4Q5VZL5 1548 aa11.08□□□□□ -0.64
NTRK3-201ENST00000317501 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
NTRK3-201ENST00000317501 RALGAPBQ86X10 1494 aa11.08□□□□□ -0.64
NTRK3-201ENST00000317501 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
NTRK3-201ENST00000317501 INSRP06213 1382 aa11.07□□□□□ -0.64
NTRK3-201ENST00000317501 WDR62O43379 1518 aa11.07□□□□□ -0.64
NTRK3-201ENST00000317501 ABCC5O15440 1437 aa11.07□□□□□ -0.64
NTRK3-201ENST00000317501 RALBP1Q15311 655 aa11.07□□□□□ -0.64
NTRK3-201ENST00000317501 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.05□□□□□ -0.64
NTRK3-201ENST00000317501 ARHGEF12Q9NZN5 1544 aa11.05□□□□□ -0.64
NTRK3-201ENST00000317501 KIAA1107Q9UPP5 1409 aa11.05□□□□□ -0.64
NTRK3-201ENST00000317501 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
NTRK3-201ENST00000317501 NFKBIBQ15653 356 aa11.04□□□□□ -0.64
NTRK3-201ENST00000317501 BRPF3Q9ULD4 1205 aa11.04□□□□□ -0.64
NTRK3-201ENST00000317501 CDK13Q14004 1512 aaKnown RBP11.04□□□□□ -0.64
NTRK3-201ENST00000317501 GAPVD1Q14C86 1478 aa11.03□□□□□ -0.64
NTRK3-201ENST00000317501 CROCC2H7BZ55 1655 aa11.03□□□□□ -0.64
NTRK3-201ENST00000317501 PLEKHH2Q8IVE3 1493 aa11.02□□□□□ -0.65
NTRK3-201ENST00000317501 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
NTRK3-201ENST00000317501 ADGRL2O95490 1459 aa11.01□□□□□ -0.65
NTRK3-201ENST00000317501 PARD3Q8TEW0 1356 aa11.01□□□□□ -0.65
NTRK3-201ENST00000317501 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
NTRK3-201ENST00000317501 FAM43AQ8N2R8 423 aa11□□□□□ -0.65
NTRK3-201ENST00000317501 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
NTRK3-201ENST00000317501 BLMP54132 1417 aaPredicted RBP11□□□□□ -0.65
NTRK3-201ENST00000317501 ITSN2Q9NZM3 1697 aa10.99□□□□□ -0.65
NTRK3-201ENST00000317501 VIRMAQ69YN4 1812 aaKnown RBP10.99□□□□□ -0.65
NTRK3-201ENST00000317501 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
NTRK3-201ENST00000317501 NLRP13Q86W25 1043 aa10.99□□□□□ -0.65
NTRK3-201ENST00000317501 KDM2BQ8NHM5 1336 aa10.99□□□□□ -0.65
NTRK3-201ENST00000317501 POLR3GLQ9BT43 218 aa10.98□□□□□ -0.65
NTRK3-201ENST00000317501 PBRM1Q86U86 1689 aa10.96□□□□□ -0.65
NTRK3-201ENST00000317501 CEP170Q5SW79 1584 aa10.96□□□□□ -0.65
NTRK3-201ENST00000317501 KDM5DQ9BY66 1539 aa10.96□□□□□ -0.65
NTRK3-201ENST00000317501 CNGB1Q14028 1251 aaPredicted RBP10.96□□□□□ -0.66
NTRK3-201ENST00000317501 CRBNQ96SW2 442 aa10.96□□□□□ -0.66
NTRK3-201ENST00000317501 DAXXQ9UER7 740 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms