RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 DAPK1P53355 1430 aa23.39■■□□□ 1.34
CALR-201ENST00000316448 NAIPQ13075 1403 aa23.37■■□□□ 1.33
CALR-201ENST00000316448 RRP7BPQ9NSQ0 103 aa23.37■■□□□ 1.33
CALR-201ENST00000316448 HFM1A2PYH4 1435 aa23.37■■□□□ 1.33
CALR-201ENST00000316448 DNMT1P26358 1616 aaKnown RBP23.36■■□□□ 1.33
CALR-201ENST00000316448 CDC42BPBQ9Y5S2 1711 aa23.35■■□□□ 1.33
CALR-201ENST00000316448 PREX2Q70Z35 1606 aa23.33■■□□□ 1.33
CALR-201ENST00000316448 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
CALR-201ENST00000316448 ASXL2Q76L83 1435 aa23.32■■□□□ 1.32
CALR-201ENST00000316448 RIMBP3CA6NJZ7 1639 aa23.32■■□□□ 1.32
CALR-201ENST00000316448 RIMBP3BA6NNM3 1639 aa23.32■■□□□ 1.32
CALR-201ENST00000316448 RIMBP3Q9UFD9 1639 aa23.32■■□□□ 1.32
CALR-201ENST00000316448 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
CALR-201ENST00000316448 HNRNPMP52272 730 aaKnown RBP eCLIP23.3■■□□□ 1.32
CALR-201ENST00000316448 AKNAQ7Z591 1439 aa23.29■■□□□ 1.32
CALR-201ENST00000316448 SAMD9LQ8IVG5 1584 aa23.29■■□□□ 1.32
CALR-201ENST00000316448 NPM1P06748 294 aaKnown RBP eCLIP23.28■■□□□ 1.32
CALR-201ENST00000316448 PLCH2O75038 1416 aa23.27■■□□□ 1.32
CALR-201ENST00000316448 MBD5Q9P267 1494 aa23.27■■□□□ 1.32
CALR-201ENST00000316448 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
CALR-201ENST00000316448 ARHGAP5Q13017 1502 aa23.26■■□□□ 1.31
CALR-201ENST00000316448 CLSPNQ9HAW4 1339 aa23.26■■□□□ 1.31
CALR-201ENST00000316448 KDM6BO15054 1643 aa23.26■■□□□ 1.31
CALR-201ENST00000316448 MYO5CQ9NQX4 1742 aa23.25■■□□□ 1.31
CALR-201ENST00000316448 GCC2Q8IWJ2 1684 aa23.22■■□□□ 1.31
CALR-201ENST00000316448 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
CALR-201ENST00000316448 MAPKBP1O60336 1514 aa23.2■■□□□ 1.3
CALR-201ENST00000316448 CROCC2H7BZ55 1655 aa23.2■■□□□ 1.3
CALR-201ENST00000316448 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
CALR-201ENST00000316448 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
CALR-201ENST00000316448 EFCAB2Q5VUJ9 269 aa23.18■■□□□ 1.3
CALR-201ENST00000316448 ABCA9Q8IUA7 1624 aa23.18■■□□□ 1.3
CALR-201ENST00000316448 ADGRL2O95490 1459 aa23.18■■□□□ 1.3
CALR-201ENST00000316448 SYCP2Q9BX26 1530 aa23.17■■□□□ 1.3
CALR-201ENST00000316448 C9orf84Q5VXU9 1444 aa23.15■■□□□ 1.3
CALR-201ENST00000316448 KIAA1107Q9UPP5 1409 aa23.15■■□□□ 1.3
CALR-201ENST00000316448 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.3
CALR-201ENST00000316448 CCDC141Q6ZP82 1450 aa23.14■■□□□ 1.29
CALR-201ENST00000316448 TSPY4P0CV99 314 aa23.14■■□□□ 1.29
CALR-201ENST00000316448 TSPY10P0CW01 314 aa23.14■■□□□ 1.29
CALR-201ENST00000316448 ADGBQ8N7X0 1667 aa23.13■■□□□ 1.29
CALR-201ENST00000316448 ARAP3Q8WWN8 1544 aa23.12■■□□□ 1.29
CALR-201ENST00000316448 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
CALR-201ENST00000316448 RSPH4AQ5TD94 716 aa23.12■■□□□ 1.29
CALR-201ENST00000316448 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
CALR-201ENST00000316448 ABCC1P33527 1531 aa23.09■■□□□ 1.29
CALR-201ENST00000316448 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
CALR-201ENST00000316448 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.29
CALR-201ENST00000316448 DENND4BO75064 1496 aaPredicted RBP23.07■■□□□ 1.28
CALR-201ENST00000316448 SIN3AQ96ST3 1273 aa23.07■■□□□ 1.28
CALR-201ENST00000316448 FANCAO15360 1455 aa23.07■■□□□ 1.28
CALR-201ENST00000316448 CD109Q6YHK3 1445 aa23.04■■□□□ 1.28
CALR-201ENST00000316448 AFAP1Q8N556 730 aa23.03■■□□□ 1.28
CALR-201ENST00000316448 KIF15Q9NS87 1388 aa23.03■■□□□ 1.28
CALR-201ENST00000316448 MAST1Q9Y2H9 1570 aa23.02■■□□□ 1.28
CALR-201ENST00000316448 ANKRD50Q9ULJ7 1429 aa23.02■■□□□ 1.28
CALR-201ENST00000316448 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.28
CALR-201ENST00000316448 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
CALR-201ENST00000316448 SCAPERQ9BY12 1400 aa22.98■■□□□ 1.27
CALR-201ENST00000316448 ADGRL1O94910 1474 aa22.96■■□□□ 1.27
CALR-201ENST00000316448 FOXD1Q16676 465 aa22.95■■□□□ 1.26
CALR-201ENST00000316448 PZPP20742 1482 aa22.95■■□□□ 1.26
CALR-201ENST00000316448 SPAG9O60271 1321 aaKnown RBP22.93■■□□□ 1.26
CALR-201ENST00000316448 PLXNC1O60486 1568 aa22.92■■□□□ 1.26
CALR-201ENST00000316448 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
CALR-201ENST00000316448 GLI2P10070 1586 aa22.91■■□□□ 1.26
CALR-201ENST00000316448 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
CALR-201ENST00000316448 FAM69CQ0P6D2 419 aa22.9■■□□□ 1.26
CALR-201ENST00000316448 RTEL1-TNFRSF6BF6WH68 1400 aa22.89■■□□□ 1.25
CALR-201ENST00000316448 MAP3K4Q9Y6R4 1608 aa22.89■■□□□ 1.25
CALR-201ENST00000316448 NUP155O75694 1391 aa22.87■■□□□ 1.25
CALR-201ENST00000316448 ZFYVE16Q7Z3T8 1539 aa22.87■■□□□ 1.25
CALR-201ENST00000316448 DIP2BQ9P265 1576 aa22.87■■□□□ 1.25
CALR-201ENST00000316448 DUOX2Q9NRD8 1548 aa22.85■■□□□ 1.25
CALR-201ENST00000316448 ANKRD30BQ9BXX2 1392 aa22.84■■□□□ 1.25
CALR-201ENST00000316448 INO80Q9ULG1 1556 aaPredicted RBP22.83■■□□□ 1.25
CALR-201ENST00000316448 NEO1Q92859 1461 aa22.83■■□□□ 1.24
CALR-201ENST00000316448 CFAP74Q9C0B2 1584 aa22.83■■□□□ 1.24
CALR-201ENST00000316448 ATP7AQ04656 1500 aa22.82■■□□□ 1.24
CALR-201ENST00000316448 PKD2Q13563 968 aa22.82■■□□□ 1.24
CALR-201ENST00000316448 KDM5DQ9BY66 1539 aa22.81■■□□□ 1.24
CALR-201ENST00000316448 ZNF316A6NFI3 1004 aaPredicted RBP22.81■■□□□ 1.24
CALR-201ENST00000316448 POGZQ7Z3K3 1410 aa22.8■■□□□ 1.24
CALR-201ENST00000316448 ZNF518AQ6AHZ1 1483 aa22.79■■□□□ 1.24
CALR-201ENST00000316448 ERBINQ96RT1 1412 aa22.79■■□□□ 1.24
CALR-201ENST00000316448 RAPGEF3O95398 923 aa22.79■■□□□ 1.24
CALR-201ENST00000316448 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
CALR-201ENST00000316448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.242e-20■■□□□ 13.6
CALR-201ENST00000316448 KIDINS220Q9ULH0 1771 aa22.77■■□□□ 1.24
CALR-201ENST00000316448 MYT1LQ9UL68 1186 aa22.77■■□□□ 1.24
CALR-201ENST00000316448 UNC13BO14795 1591 aa22.77■■□□□ 1.24
CALR-201ENST00000316448 KDM5CP41229 1560 aa22.76■■□□□ 1.23
CALR-201ENST00000316448 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
CALR-201ENST00000316448 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
CALR-201ENST00000316448 FAM135AQ9P2D6 1515 aa22.74■■□□□ 1.23
CALR-201ENST00000316448 TONSLQ96HA7 1378 aa22.73■■□□□ 1.23
CALR-201ENST00000316448 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
CALR-201ENST00000316448 MLH3Q9UHC1 1453 aa22.72■■□□□ 1.23
CALR-201ENST00000316448 TSPOAP1O95153 1857 aa22.72■■□□□ 1.23
CALR-201ENST00000316448 MAGI2Q86UL8 1455 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms