RNA–Protein interactions for RNA: ENST00000316334.4

LNX2-201, Transcript of ligand of numb-protein X 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LNX2, Length 4,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNX2-201ENST00000316334 NUP153P49790 1475 aaKnown RBP8.65□□□□□ -1.03
LNX2-201ENST00000316334 HECW1Q76N89 1606 aa8.64□□□□□ -1.03
LNX2-201ENST00000316334 ANKRD30AQ9BXX3 1397 aa8.63□□□□□ -1.03
LNX2-201ENST00000316334 KDM5BQ9UGL1 1544 aa8.63□□□□□ -1.03
LNX2-201ENST00000316334 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
LNX2-201ENST00000316334 ABCC2Q92887 1545 aa8.62□□□□□ -1.03
LNX2-201ENST00000316334 ZCCHC11Q5TAX3 1644 aaKnown RBP8.62□□□□□ -1.03
LNX2-201ENST00000316334 SETD5Q9C0A6 1442 aa8.62□□□□□ -1.03
LNX2-201ENST00000316334 TIAM1Q13009 1591 aa8.61□□□□□ -1.03
LNX2-201ENST00000316334 PLB1Q6P1J6 1458 aa8.61□□□□□ -1.03
LNX2-201ENST00000316334 EHBP1L1Q8N3D4 1523 aa8.61□□□□□ -1.03
LNX2-201ENST00000316334 HNRNPUQ00839 825 aaKnown RBP eCLIP8.61□□□□□ -1.03
LNX2-201ENST00000316334 PLEKHH2Q8IVE3 1493 aa8.6□□□□□ -1.03
LNX2-201ENST00000316334 CHIC2Q9UKJ5 165 aa8.6□□□□□ -1.03
LNX2-201ENST00000316334 NBR1Q14596 966 aa8.6□□□□□ -1.03
LNX2-201ENST00000316334 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
LNX2-201ENST00000316334 STAG3Q9UJ98 1225 aa8.59□□□□□ -1.03
LNX2-201ENST00000316334 SIN3AQ96ST3 1273 aa8.59□□□□□ -1.03
LNX2-201ENST00000316334 EPRSP07814 1512 aaKnown RBP8.58□□□□□ -1.04
LNX2-201ENST00000316334 MYOM3Q5VTT5 1437 aa8.58□□□□□ -1.04
LNX2-201ENST00000316334 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
LNX2-201ENST00000316334 LRRC9Q6ZRR7 1453 aa8.57□□□□□ -1.04
LNX2-201ENST00000316334 ATP10BO94823 1461 aa8.57□□□□□ -1.04
LNX2-201ENST00000316334 MIA2Q96PC5 1412 aa8.56□□□□□ -1.04
LNX2-201ENST00000316334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.56□□□□□ -1.04
LNX2-201ENST00000316334 HDGFP51858 240 aaKnown RBP8.56□□□□□ -1.04
LNX2-201ENST00000316334 RRP7BPQ9NSQ0 103 aa8.56□□□□□ -1.04
LNX2-201ENST00000316334 CDK13Q14004 1512 aaKnown RBP8.56□□□□□ -1.04
LNX2-201ENST00000316334 UACAQ9BZF9 1416 aa8.56□□□□□ -1.04
LNX2-201ENST00000316334 DHX57Q6P158 1386 aaKnown RBP8.56□□□□□ -1.04
LNX2-201ENST00000316334 MAPKBP1O60336 1514 aa8.55□□□□□ -1.04
LNX2-201ENST00000316334 POLR3GLQ9BT43 218 aa8.54□□□□□ -1.04
LNX2-201ENST00000316334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.54□□□□□ -1.04
LNX2-201ENST00000316334 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
LNX2-201ENST00000316334 KIF14Q15058 1648 aa8.54□□□□□ -1.04
LNX2-201ENST00000316334 TROQ12816 1431 aaPredicted RBP8.54□□□□□ -1.04
LNX2-201ENST00000316334 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
LNX2-201ENST00000316334 PPRC1Q5VV67 1664 aaKnown RBP8.53□□□□□ -1.04
LNX2-201ENST00000316334 KIF13AQ9H1H9 1805 aa8.53□□□□□ -1.04
LNX2-201ENST00000316334 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
LNX2-201ENST00000316334 ABCC10Q5T3U5 1492 aa8.53□□□□□ -1.04
LNX2-201ENST00000316334 CDC42BPAQ5VT25 1732 aa8.52□□□□□ -1.04
LNX2-201ENST00000316334 FGD6Q6ZV73 1430 aa8.52□□□□□ -1.05
LNX2-201ENST00000316334 SPAG9O60271 1321 aaKnown RBP8.52□□□□□ -1.05
LNX2-201ENST00000316334 SUPT6HQ7KZ85 1726 aaKnown RBP8.52□□□□□ -1.05
LNX2-201ENST00000316334 ABCA9Q8IUA7 1624 aa8.51□□□□□ -1.05
LNX2-201ENST00000316334 MAP3K4Q9Y6R4 1608 aa8.51□□□□□ -1.05
LNX2-201ENST00000316334 CDC42BPBQ9Y5S2 1711 aa8.51□□□□□ -1.05
LNX2-201ENST00000316334 SENP3-EIF4A1A0A087X0R7 540 aa8.51□□□□□ -1.05
LNX2-201ENST00000316334 FAM9BQ8IZU0 186 aa8.51□□□□□ -1.05
LNX2-201ENST00000316334 NCOA2Q15596 1464 aa8.5□□□□□ -1.05
LNX2-201ENST00000316334 TTC37Q6PGP7 1564 aa8.5□□□□□ -1.05
LNX2-201ENST00000316334 DEKP35659 375 aaKnown RBP8.5□□□□□ -1.05
LNX2-201ENST00000316334 GLI2P10070 1586 aa8.5□□□□□ -1.05
LNX2-201ENST00000316334 CHGAP10645 457 aaKnown RBP8.5□□□□□ -1.05
LNX2-201ENST00000316334 STAC3Q96MF2 364 aa8.5□□□□□ -1.05
LNX2-201ENST00000316334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
LNX2-201ENST00000316334 RRBP1Q9P2E9 1410 aaKnown RBP8.49□□□□□ -1.05
LNX2-201ENST00000316334 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
LNX2-201ENST00000316334 B4GALNT3Q6L9W6 998 aa8.49□□□□□ -1.05
LNX2-201ENST00000316334 PREX2Q70Z35 1606 aa8.48□□□□□ -1.05
LNX2-201ENST00000316334 MSH5O43196 834 aa8.48□□□□□ -1.05
LNX2-201ENST00000316334 DIP2BQ9P265 1576 aa8.48□□□□□ -1.05
LNX2-201ENST00000316334 NEFMP07197 916 aa8.47□□□□□ -1.05
LNX2-201ENST00000316334 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
LNX2-201ENST00000316334 DNAJC5Q9H3Z4 198 aa8.47□□□□□ -1.05
LNX2-201ENST00000316334 ARID4BQ4LE39 1312 aaPredicted RBP8.47□□□□□ -1.05
LNX2-201ENST00000316334 RTN4Q9NQC3 1192 aaKnown RBP8.46□□□□□ -1.05
LNX2-201ENST00000316334 ARAP3Q8WWN8 1544 aa8.46□□□□□ -1.05
LNX2-201ENST00000316334 RAB3GAP2Q9H2M9 1393 aa8.46□□□□□ -1.06
LNX2-201ENST00000316334 PPP1R15AO75807 674 aaPredicted RBP8.45□□□□□ -1.06
LNX2-201ENST00000316334 TCOF1Q13428 1488 aaKnown RBP8.45□□□□□ -1.06
LNX2-201ENST00000316334 WDR7Q9Y4E6 1490 aa8.45□□□□□ -1.06
LNX2-201ENST00000316334 CROCC2H7BZ55 1655 aa8.44□□□□□ -1.06
LNX2-201ENST00000316334 NUP155O75694 1391 aa8.44□□□□□ -1.06
LNX2-201ENST00000316334 ARHGAP5Q13017 1502 aa8.44□□□□□ -1.06
LNX2-201ENST00000316334 MYO5CQ9NQX4 1742 aa8.44□□□□□ -1.06
LNX2-201ENST00000316334 TRHP20396 242 aaPredicted RBP8.44□□□□□ -1.06
LNX2-201ENST00000316334 ANP32AP39687 249 aaKnown RBP8.44□□□□□ -1.06
LNX2-201ENST00000316334 PHLDB1Q86UU1 1377 aa8.44□□□□□ -1.06
LNX2-201ENST00000316334 ITSN2Q9NZM3 1697 aa8.43□□□□□ -1.06
LNX2-201ENST00000316334 ASXL2Q76L83 1435 aa8.43□□□□□ -1.06
LNX2-201ENST00000316334 ROCK1Q13464 1354 aa8.42□□□□□ -1.06
LNX2-201ENST00000316334 SAMD9LQ8IVG5 1584 aa8.42□□□□□ -1.06
LNX2-201ENST00000316334 CYB5RLQ6IPT4 315 aa8.42□□□□□ -1.06
LNX2-201ENST00000316334 MPHOSPH9Q99550 1183 aa8.42□□□□□ -1.06
LNX2-201ENST00000316334 CCER2I3L3R5 266 aa8.42□□□□□ -1.06
LNX2-201ENST00000316334 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
LNX2-201ENST00000316334 GPATCH8Q9UKJ3 1502 aaKnown RBP8.41□□□□□ -1.06
LNX2-201ENST00000316334 HNRNPMP52272 730 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■■■□□ 14.8
LNX2-201ENST00000316334 PPP4R2Q9NY27 417 aa8.41□□□□□ -1.06
LNX2-201ENST00000316334 NOP58Q9Y2X3 529 aaKnown RBP8.41□□□□□ -1.06
LNX2-201ENST00000316334 PKD2Q13563 968 aa8.4□□□□□ -1.06
LNX2-201ENST00000316334 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.06
LNX2-201ENST00000316334 CCDC136Q96JN2 1154 aa8.4□□□□□ -1.06
LNX2-201ENST00000316334 EIF3AQ14152 1382 aaKnown RBP8.4□□□□□ -1.07
LNX2-201ENST00000316334 FRMPD1Q5SYB0 1578 aa8.4□□□□□ -1.07
LNX2-201ENST00000316334 PTPN23Q9H3S7 1636 aa8.39□□□□□ -1.07
LNX2-201ENST00000316334 FANCIQ9NVI1 1328 aa8.38□□□□□ -1.07
LNX2-201ENST00000316334 KIF15Q9NS87 1388 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms