RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 IFT140Q96RY7 1462 aa17.93■□□□□ 0.46
PCDHB9-201ENST00000316105 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
PCDHB9-201ENST00000316105 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
PCDHB9-201ENST00000316105 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
PCDHB9-201ENST00000316105 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
PCDHB9-201ENST00000316105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCDHB9-201ENST00000316105 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
PCDHB9-201ENST00000316105 KNSTRNQ9Y448 316 aa17.9■□□□□ 0.46
PCDHB9-201ENST00000316105 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.45
PCDHB9-201ENST00000316105 SNAPC4Q5SXM2 1469 aa17.89■□□□□ 0.45
PCDHB9-201ENST00000316105 ROCK2O75116 1388 aaKnown RBP17.88■□□□□ 0.45
PCDHB9-201ENST00000316105 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
PCDHB9-201ENST00000316105 SUPT6HQ7KZ85 1726 aaKnown RBP17.87■□□□□ 0.45
PCDHB9-201ENST00000316105 CDCA8Q53HL2 280 aa17.87■□□□□ 0.45
PCDHB9-201ENST00000316105 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
PCDHB9-201ENST00000316105 CDK13Q14004 1512 aaKnown RBP17.87■□□□□ 0.45
PCDHB9-201ENST00000316105 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
PCDHB9-201ENST00000316105 ESF1Q9H501 851 aaKnown RBP17.86■□□□□ 0.45
PCDHB9-201ENST00000316105 TMF1P82094 1093 aa17.86■□□□□ 0.45
PCDHB9-201ENST00000316105 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
PCDHB9-201ENST00000316105 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
PCDHB9-201ENST00000316105 EPRSP07814 1512 aaKnown RBP17.85■□□□□ 0.45
PCDHB9-201ENST00000316105 NAIPQ13075 1403 aa17.85■□□□□ 0.45
PCDHB9-201ENST00000316105 IQGAP2Q13576 1575 aa17.85■□□□□ 0.45
PCDHB9-201ENST00000316105 MIA2Q96PC5 1412 aa17.85■□□□□ 0.45
PCDHB9-201ENST00000316105 NEFMP07197 916 aa17.83■□□□□ 0.45
PCDHB9-201ENST00000316105 B4GALNT3Q6L9W6 998 aa17.82■□□□□ 0.44
PCDHB9-201ENST00000316105 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
PCDHB9-201ENST00000316105 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
PCDHB9-201ENST00000316105 KANK1Q14678 1352 aa17.82■□□□□ 0.44
PCDHB9-201ENST00000316105 KIAA0586Q9BVV6 1533 aa17.81■□□□□ 0.44
PCDHB9-201ENST00000316105 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
PCDHB9-201ENST00000316105 USP47Q96K76 1375 aa17.79■□□□□ 0.44
PCDHB9-201ENST00000316105 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
PCDHB9-201ENST00000316105 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
PCDHB9-201ENST00000316105 SPAG9O60271 1321 aaKnown RBP17.78■□□□□ 0.44
PCDHB9-201ENST00000316105 WASHC2AQ641Q2 1341 aa17.78■□□□□ 0.44
PCDHB9-201ENST00000316105 TROQ12816 1431 aaPredicted RBP17.78■□□□□ 0.44
PCDHB9-201ENST00000316105 KIF15Q9NS87 1388 aa17.78■□□□□ 0.44
PCDHB9-201ENST00000316105 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
PCDHB9-201ENST00000316105 ZNF608Q9ULD9 1512 aaPredicted RBP17.76■□□□□ 0.43
PCDHB9-201ENST00000316105 KTN1Q86UP2 1357 aaKnown RBP17.75■□□□□ 0.43
PCDHB9-201ENST00000316105 KIF3BO15066 747 aa17.75■□□□□ 0.43
PCDHB9-201ENST00000316105 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
PCDHB9-201ENST00000316105 PTPN23Q9H3S7 1636 aa17.75■□□□□ 0.43
PCDHB9-201ENST00000316105 DAPK1P53355 1430 aa17.75■□□□□ 0.43
PCDHB9-201ENST00000316105 GGT6Q6P531 493 aa17.74■□□□□ 0.43
PCDHB9-201ENST00000316105 ANP32EQ9BTT0 268 aa17.73■□□□□ 0.43
PCDHB9-201ENST00000316105 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
PCDHB9-201ENST00000316105 TSHZ2Q9NRE2 1034 aa17.73■□□□□ 0.43
PCDHB9-201ENST00000316105 RALBP1Q15311 655 aa17.73■□□□□ 0.43
PCDHB9-201ENST00000316105 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
PCDHB9-201ENST00000316105 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
PCDHB9-201ENST00000316105 MAPKBP1O60336 1514 aa17.7■□□□□ 0.42
PCDHB9-201ENST00000316105 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
PCDHB9-201ENST00000316105 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
PCDHB9-201ENST00000316105 CTTNBP2Q8WZ74 1663 aa17.69■□□□□ 0.42
PCDHB9-201ENST00000316105 CNTLNQ9NXG0 1405 aa17.69■□□□□ 0.42
PCDHB9-201ENST00000316105 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
PCDHB9-201ENST00000316105 PTPRKQ15262 1439 aa17.68■□□□□ 0.42
PCDHB9-201ENST00000316105 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
PCDHB9-201ENST00000316105 PLB1Q6P1J6 1458 aa17.68■□□□□ 0.42
PCDHB9-201ENST00000316105 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
PCDHB9-201ENST00000316105 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
PCDHB9-201ENST00000316105 C9orf84Q5VXU9 1444 aa17.65■□□□□ 0.42
PCDHB9-201ENST00000316105 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
PCDHB9-201ENST00000316105 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
PCDHB9-201ENST00000316105 ROCK1Q13464 1354 aa17.64■□□□□ 0.42
PCDHB9-201ENST00000316105 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
PCDHB9-201ENST00000316105 CFAP43Q8NDM7 1665 aa17.64■□□□□ 0.41
PCDHB9-201ENST00000316105 ABCC5O15440 1437 aa17.63■□□□□ 0.41
PCDHB9-201ENST00000316105 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
PCDHB9-201ENST00000316105 KIAA1107Q9UPP5 1409 aa17.63■□□□□ 0.41
PCDHB9-201ENST00000316105 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
PCDHB9-201ENST00000316105 ZBED9Q6R2W3 1325 aa17.62■□□□□ 0.41
PCDHB9-201ENST00000316105 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
PCDHB9-201ENST00000316105 NBR1Q14596 966 aa17.62■□□□□ 0.41
PCDHB9-201ENST00000316105 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
PCDHB9-201ENST00000316105 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
PCDHB9-201ENST00000316105 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
PCDHB9-201ENST00000316105 PANK3Q9H999 370 aa17.6■□□□□ 0.41
PCDHB9-201ENST00000316105 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCDHB9-201ENST00000316105 POGKQ9P215 609 aa17.58■□□□□ 0.41
PCDHB9-201ENST00000316105 UGGT2Q9NYU1 1516 aa17.58■□□□□ 0.41
PCDHB9-201ENST00000316105 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.41
PCDHB9-201ENST00000316105 CAMSAP2Q08AD1 1489 aa17.58■□□□□ 0.41
PCDHB9-201ENST00000316105 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.4
PCDHB9-201ENST00000316105 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
PCDHB9-201ENST00000316105 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
PCDHB9-201ENST00000316105 AFAP1Q8N556 730 aa17.55■□□□□ 0.4
PCDHB9-201ENST00000316105 EIF3AQ14152 1382 aaKnown RBP17.55■□□□□ 0.4
PCDHB9-201ENST00000316105 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
PCDHB9-201ENST00000316105 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
PCDHB9-201ENST00000316105 AKNAQ7Z591 1439 aa17.54■□□□□ 0.4
PCDHB9-201ENST00000316105 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
PCDHB9-201ENST00000316105 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
PCDHB9-201ENST00000316105 CCDC184Q52MB2 194 aa17.53■□□□□ 0.4
PCDHB9-201ENST00000316105 STK26Q9P289 416 aa17.52■□□□□ 0.4
PCDHB9-201ENST00000316105 NCOA1Q15788 1441 aa17.52■□□□□ 0.4
PCDHB9-201ENST00000316105 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms