RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
CHFR-202ENST00000315585 DNMT1P26358 1616 aaKnown RBP21.3■■□□□ 1
CHFR-202ENST00000315585 ERCC6L2Q5T890 1561 aa21.29■■□□□ 1
CHFR-202ENST00000315585 GCC2Q8IWJ2 1684 aa21.29■■□□□ 1
CHFR-202ENST00000315585 DAPK1P53355 1430 aa21.28■■□□□ 1
CHFR-202ENST00000315585 ROCK1Q13464 1354 aa21.28■■□□□ 1
CHFR-202ENST00000315585 UHRF1BP1LA0JNW5 1464 aa21.27■□□□□ 0.99
CHFR-202ENST00000315585 ABCC10Q5T3U5 1492 aa21.27■□□□□ 0.99
CHFR-202ENST00000315585 SIN3AQ96ST3 1273 aa21.26■□□□□ 0.99
CHFR-202ENST00000315585 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
CHFR-202ENST00000315585 PPP1R15AO75807 674 aaPredicted RBP21.25■□□□□ 0.99
CHFR-202ENST00000315585 CHIC2Q9UKJ5 165 aa21.23■□□□□ 0.99
CHFR-202ENST00000315585 ABCC5O15440 1437 aa21.23■□□□□ 0.99
CHFR-202ENST00000315585 TONSLQ96HA7 1378 aa21.22■□□□□ 0.99
CHFR-202ENST00000315585 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
CHFR-202ENST00000315585 RRP7BPQ9NSQ0 103 aa21.21■□□□□ 0.99
CHFR-202ENST00000315585 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
CHFR-202ENST00000315585 ZNF777Q9ULD5 760 aaPredicted RBP21.18■□□□□ 0.98
CHFR-202ENST00000315585 OSCARQ8IYS5 282 aa21.17■□□□□ 0.98
CHFR-202ENST00000315585 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
CHFR-202ENST00000315585 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
CHFR-202ENST00000315585 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.97
CHFR-202ENST00000315585 ZCCHC11Q5TAX3 1644 aaKnown RBP21.13■□□□□ 0.97
CHFR-202ENST00000315585 PREX2Q70Z35 1606 aa21.13■□□□□ 0.97
CHFR-202ENST00000315585 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
CHFR-202ENST00000315585 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
CHFR-202ENST00000315585 RSPH4AQ5TD94 716 aa21.11■□□□□ 0.97
CHFR-202ENST00000315585 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
CHFR-202ENST00000315585 ARHGEF5Q12774 1597 aa21.09■□□□□ 0.97
CHFR-202ENST00000315585 TRIM52Q96A61 297 aa21.09■□□□□ 0.97
CHFR-202ENST00000315585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHFR-202ENST00000315585 NCOA1Q15788 1441 aa21.08■□□□□ 0.97
CHFR-202ENST00000315585 TSPY4P0CV99 314 aa21.07■□□□□ 0.96
CHFR-202ENST00000315585 TSPY10P0CW01 314 aa21.07■□□□□ 0.96
CHFR-202ENST00000315585 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
CHFR-202ENST00000315585 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
CHFR-202ENST00000315585 DDX10Q13206 875 aaKnown RBP21.06■□□□□ 0.96
CHFR-202ENST00000315585 PLEKHH2Q8IVE3 1493 aa21.05■□□□□ 0.96
CHFR-202ENST00000315585 TTC37Q6PGP7 1564 aa21.05■□□□□ 0.96
CHFR-202ENST00000315585 KDM6BO15054 1643 aa21.05■□□□□ 0.96
CHFR-202ENST00000315585 ARHGAP5Q13017 1502 aa21.04■□□□□ 0.96
CHFR-202ENST00000315585 C9orf84Q5VXU9 1444 aa21.03■□□□□ 0.96
CHFR-202ENST00000315585 SAMD9LQ8IVG5 1584 aa21.03■□□□□ 0.96
CHFR-202ENST00000315585 CCDC141Q6ZP82 1450 aa21.02■□□□□ 0.96
CHFR-202ENST00000315585 CCER2I3L3R5 266 aa21.02■□□□□ 0.95
CHFR-202ENST00000315585 ANP32CO43423 234 aa21.01■□□□□ 0.95
CHFR-202ENST00000315585 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
CHFR-202ENST00000315585 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
CHFR-202ENST00000315585 MBD5Q9P267 1494 aa21.01■□□□□ 0.95
CHFR-202ENST00000315585 PLCH2O75038 1416 aa20.99■□□□□ 0.95
CHFR-202ENST00000315585 KIAA1107Q9UPP5 1409 aa20.99■□□□□ 0.95
CHFR-202ENST00000315585 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.95
CHFR-202ENST00000315585 WDR7Q9Y4E6 1490 aa20.97■□□□□ 0.95
CHFR-202ENST00000315585 ANKRD50Q9ULJ7 1429 aa20.97■□□□□ 0.95
CHFR-202ENST00000315585 EFCAB2Q5VUJ9 269 aa20.96■□□□□ 0.95
CHFR-202ENST00000315585 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.95
CHFR-202ENST00000315585 MAST1Q9Y2H9 1570 aa20.94■□□□□ 0.94
CHFR-202ENST00000315585 SYCP2Q9BX26 1530 aa20.93■□□□□ 0.94
CHFR-202ENST00000315585 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
CHFR-202ENST00000315585 DENND4BO75064 1496 aaPredicted RBP20.92■□□□□ 0.94
CHFR-202ENST00000315585 SLC4A1APQ9BWU0 796 aaKnown RBP20.92■□□□□ 0.94
CHFR-202ENST00000315585 KIF15Q9NS87 1388 aa20.91■□□□□ 0.94
CHFR-202ENST00000315585 PZPP20742 1482 aa20.87■□□□□ 0.93
CHFR-202ENST00000315585 ASXL2Q76L83 1435 aa20.86■□□□□ 0.93
CHFR-202ENST00000315585 ABCA9Q8IUA7 1624 aa20.86■□□□□ 0.93
CHFR-202ENST00000315585 ANKRD30BQ9BXX2 1392 aa20.86■□□□□ 0.93
CHFR-202ENST00000315585 ABCC1P33527 1531 aa20.85■□□□□ 0.93
CHFR-202ENST00000315585 EIF4G2P78344 907 aaKnown RBP eCLIP20.85■□□□□ 0.93
CHFR-202ENST00000315585 PLXNC1O60486 1568 aa20.85■□□□□ 0.93
CHFR-202ENST00000315585 HIRIP3Q9BW71 556 aaPredicted RBP20.85■□□□□ 0.93
CHFR-202ENST00000315585 KDM5DQ9BY66 1539 aa20.84■□□□□ 0.93
CHFR-202ENST00000315585 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
CHFR-202ENST00000315585 NUP155O75694 1391 aa20.81■□□□□ 0.92
CHFR-202ENST00000315585 RPRD2Q5VT52 1461 aaKnown RBP20.81■□□□□ 0.92
CHFR-202ENST00000315585 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
CHFR-202ENST00000315585 DUOX2Q9NRD8 1548 aa20.78■□□□□ 0.92
CHFR-202ENST00000315585 FANCAO15360 1455 aa20.77■□□□□ 0.92
CHFR-202ENST00000315585 FOXD1Q16676 465 aa20.77■□□□□ 0.92
CHFR-202ENST00000315585 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.92
CHFR-202ENST00000315585 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.92
CHFR-202ENST00000315585 HSPA5P11021 654 aaKnown RBP20.76■□□□□ 0.91
CHFR-202ENST00000315585 PKD2Q13563 968 aa20.76■□□□□ 0.91
CHFR-202ENST00000315585 ERBINQ96RT1 1412 aa20.75■□□□□ 0.91
CHFR-202ENST00000315585 TRAPPC8Q9Y2L5 1435 aa20.73■□□□□ 0.91
CHFR-202ENST00000315585 UNC13BO14795 1591 aa20.73■□□□□ 0.91
CHFR-202ENST00000315585 SPAG9O60271 1321 aaKnown RBP20.72■□□□□ 0.91
CHFR-202ENST00000315585 CFAP74Q9C0B2 1584 aa20.71■□□□□ 0.91
CHFR-202ENST00000315585 NEFLP07196 543 aa20.7■□□□□ 0.9
CHFR-202ENST00000315585 ADGRL1O94910 1474 aa20.7■□□□□ 0.9
CHFR-202ENST00000315585 FAM135AQ9P2D6 1515 aa20.69■□□□□ 0.9
CHFR-202ENST00000315585 WASHC2AQ641Q2 1341 aa20.69■□□□□ 0.9
CHFR-202ENST00000315585 TEX14Q8IWB6 1497 aa20.67■□□□□ 0.9
CHFR-202ENST00000315585 SCAPERQ9BY12 1400 aa20.67■□□□□ 0.9
CHFR-202ENST00000315585 ZFYVE16Q7Z3T8 1539 aa20.66■□□□□ 0.9
CHFR-202ENST00000315585 CD109Q6YHK3 1445 aa20.66■□□□□ 0.9
CHFR-202ENST00000315585 IQGAP3Q86VI3 1631 aa20.65■□□□□ 0.9
CHFR-202ENST00000315585 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
CHFR-202ENST00000315585 AFAP1Q8N556 730 aa20.64■□□□□ 0.89
CHFR-202ENST00000315585 MAGI2Q86UL8 1455 aa20.64■□□□□ 0.89
CHFR-202ENST00000315585 ATP7AQ04656 1500 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms