RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 SENP3Q9H4L4 574 aaPredicted RBP17.88■□□□□ 0.45
ZNF541-202ENST00000314121 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
ZNF541-202ENST00000314121 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
ZNF541-202ENST00000314121 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.45
ZNF541-202ENST00000314121 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.44
ZNF541-202ENST00000314121 MORC1Q86VD1 984 aa17.82■□□□□ 0.44
ZNF541-202ENST00000314121 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
ZNF541-202ENST00000314121 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
ZNF541-202ENST00000314121 PNNQ9H307 717 aaKnown RBP17.81■□□□□ 0.44
ZNF541-202ENST00000314121 KIF21BO75037 1637 aa17.81■□□□□ 0.44
ZNF541-202ENST00000314121 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
ZNF541-202ENST00000314121 POGKQ9P215 609 aa17.8■□□□□ 0.44
ZNF541-202ENST00000314121 KANK1Q14678 1352 aa17.8■□□□□ 0.44
ZNF541-202ENST00000314121 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
ZNF541-202ENST00000314121 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
ZNF541-202ENST00000314121 HSCBQ8IWL3 235 aa17.78■□□□□ 0.44
ZNF541-202ENST00000314121 NAP1L5Q96NT1 182 aaPredicted RBP17.78■□□□□ 0.44
ZNF541-202ENST00000314121 IGF1RP08069 1367 aa17.77■□□□□ 0.44
ZNF541-202ENST00000314121 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
ZNF541-202ENST00000314121 KIF15Q9NS87 1388 aa17.77■□□□□ 0.44
ZNF541-202ENST00000314121 GOLGA2Q08379 1002 aa17.77■□□□□ 0.43
ZNF541-202ENST00000314121 PTMAP06454 111 aaKnown RBP17.76■□□□□ 0.43
ZNF541-202ENST00000314121 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
ZNF541-202ENST00000314121 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
ZNF541-202ENST00000314121 PHLDB1Q86UU1 1377 aa17.75■□□□□ 0.43
ZNF541-202ENST00000314121 ST20-MTHFSA0A0A6YYL1 179 aa17.75■□□□□ 0.43
ZNF541-202ENST00000314121 ARID4BQ4LE39 1312 aaPredicted RBP17.75■□□□□ 0.43
ZNF541-202ENST00000314121 RSPH4AQ5TD94 716 aa17.73■□□□□ 0.43
ZNF541-202ENST00000314121 RWDD1Q9H446 243 aaPredicted RBP17.72■□□□□ 0.43
ZNF541-202ENST00000314121 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
ZNF541-202ENST00000314121 UACAQ9BZF9 1416 aa17.7■□□□□ 0.42
ZNF541-202ENST00000314121 IPO8O15397 1037 aaKnown RBP17.69■□□□□ 0.42
ZNF541-202ENST00000314121 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
ZNF541-202ENST00000314121 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
ZNF541-202ENST00000314121 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
ZNF541-202ENST00000314121 PDE4AP27815 886 aa17.69■□□□□ 0.42
ZNF541-202ENST00000314121 SLKQ9H2G2 1235 aaPredicted RBP17.68■□□□□ 0.42
ZNF541-202ENST00000314121 USP47Q96K76 1375 aa17.68■□□□□ 0.42
ZNF541-202ENST00000314121 SRPK2P78362 688 aaKnown RBP17.68■□□□□ 0.42
ZNF541-202ENST00000314121 HNRNPMP52272 730 aaKnown RBP eCLIP17.68■□□□□ 0.42
ZNF541-202ENST00000314121 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
ZNF541-202ENST00000314121 DNTTIP2Q5QJE6 756 aaKnown RBP17.68■□□□□ 0.42
ZNF541-202ENST00000314121 LRRC9Q6ZRR7 1453 aa17.67■□□□□ 0.42
ZNF541-202ENST00000314121 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
ZNF541-202ENST00000314121 U2AF1L5P0DN76 240 aaPredicted RBP17.67■□□□□ 0.42
ZNF541-202ENST00000314121 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.42
ZNF541-202ENST00000314121 SPRYD3Q8NCJ5 442 aa17.67■□□□□ 0.42
ZNF541-202ENST00000314121 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
ZNF541-202ENST00000314121 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
ZNF541-202ENST00000314121 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
ZNF541-202ENST00000314121 C14orf37Q86TY3 774 aa17.65■□□□□ 0.42
ZNF541-202ENST00000314121 EXOC6Q8TAG9 804 aa17.65■□□□□ 0.42
ZNF541-202ENST00000314121 CCDC7Q96M83 1385 aa17.65■□□□□ 0.42
ZNF541-202ENST00000314121 ARAP1Q96P48 1450 aa17.64■□□□□ 0.41
ZNF541-202ENST00000314121 EIF3AQ14152 1382 aaKnown RBP17.64■□□□□ 0.41
ZNF541-202ENST00000314121 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
ZNF541-202ENST00000314121 PANK3Q9H999 370 aa17.63■□□□□ 0.41
ZNF541-202ENST00000314121 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
ZNF541-202ENST00000314121 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
ZNF541-202ENST00000314121 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
ZNF541-202ENST00000314121 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
ZNF541-202ENST00000314121 SAFB2Q14151 953 aaKnown RBP eCLIP17.61■□□□□ 0.41
ZNF541-202ENST00000314121 GBP4Q96PP9 640 aa17.61■□□□□ 0.41
ZNF541-202ENST00000314121 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
ZNF541-202ENST00000314121 CCDC146Q8IYE0 955 aa17.6■□□□□ 0.41
ZNF541-202ENST00000314121 CCDC144AA2RUR9 1427 aa17.6■□□□□ 0.41
ZNF541-202ENST00000314121 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
ZNF541-202ENST00000314121 WASHC2AQ641Q2 1341 aa17.6■□□□□ 0.41
ZNF541-202ENST00000314121 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
ZNF541-202ENST00000314121 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
ZNF541-202ENST00000314121 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
ZNF541-202ENST00000314121 GGT6Q6P531 493 aa17.59■□□□□ 0.41
ZNF541-202ENST00000314121 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
ZNF541-202ENST00000314121 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
ZNF541-202ENST00000314121 PLIN1O60240 522 aa17.59■□□□□ 0.41
ZNF541-202ENST00000314121 PTMSP20962 102 aa17.57■□□□□ 0.4
ZNF541-202ENST00000314121 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
ZNF541-202ENST00000314121 HDGFL2Q7Z4V5 671 aaPredicted RBP17.57■□□□□ 0.4
ZNF541-202ENST00000314121 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
ZNF541-202ENST00000314121 MSNP26038 577 aaKnown RBP17.57■□□□□ 0.4
ZNF541-202ENST00000314121 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
ZNF541-202ENST00000314121 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
ZNF541-202ENST00000314121 ZRSR1Q15695 479 aaKnown RBP17.56■□□□□ 0.4
ZNF541-202ENST00000314121 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
ZNF541-202ENST00000314121 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
ZNF541-202ENST00000314121 SMC4Q9NTJ3 1288 aa17.56■□□□□ 0.4
ZNF541-202ENST00000314121 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
ZNF541-202ENST00000314121 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
ZNF541-202ENST00000314121 KIF3BO15066 747 aa17.54■□□□□ 0.4
ZNF541-202ENST00000314121 CUX1P39880 1505 aa17.54■□□□□ 0.4
ZNF541-202ENST00000314121 MCCP23508 829 aa17.54■□□□□ 0.4
ZNF541-202ENST00000314121 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
ZNF541-202ENST00000314121 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
ZNF541-202ENST00000314121 STK26Q9P289 416 aa17.54■□□□□ 0.4
ZNF541-202ENST00000314121 GOLGA6L3A6NEY3 463 aa17.53■□□□□ 0.4
ZNF541-202ENST00000314121 PLEKHG5O94827 1062 aa17.52■□□□□ 0.4
ZNF541-202ENST00000314121 E9PSI1 815 aa17.52■□□□□ 0.4
ZNF541-202ENST00000314121 SPAG9O60271 1321 aaKnown RBP17.52■□□□□ 0.39
ZNF541-202ENST00000314121 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.39
ZNF541-202ENST00000314121 GSE1Q14687 1217 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms