RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CAMSAP2Q08AD1 1489 aa24.59■■□□□ 1.53
CLCF1-201ENST00000312438 ROCK1Q13464 1354 aa24.58■■□□□ 1.53
CLCF1-201ENST00000312438 KCNH8Q96L42 1107 aa24.56■■□□□ 1.52
CLCF1-201ENST00000312438 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
CLCF1-201ENST00000312438 ZCCHC11Q5TAX3 1644 aaKnown RBP24.54■■□□□ 1.52
CLCF1-201ENST00000312438 ACIN1Q9UKV3 1341 aaKnown RBP24.52■■□□□ 1.52
CLCF1-201ENST00000312438 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
CLCF1-201ENST00000312438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.49■■□□□ 1.51
CLCF1-201ENST00000312438 RSPH4AQ5TD94 716 aa24.48■■□□□ 1.51
CLCF1-201ENST00000312438 MAPKBP1O60336 1514 aa24.46■■□□□ 1.51
CLCF1-201ENST00000312438 NPM1P06748 294 aaKnown RBP eCLIP24.45■■□□□ 1.5
CLCF1-201ENST00000312438 TSPY4P0CV99 314 aa24.45■■□□□ 1.5
CLCF1-201ENST00000312438 TSPY10P0CW01 314 aa24.45■■□□□ 1.5
CLCF1-201ENST00000312438 HNRNPMP52272 730 aaKnown RBP eCLIP24.43■■□□□ 1.5
CLCF1-201ENST00000312438 NCOA1Q15788 1441 aa24.43■■□□□ 1.5
CLCF1-201ENST00000312438 GCC2Q8IWJ2 1684 aa24.43■■□□□ 1.5
CLCF1-201ENST00000312438 PLCH2O75038 1416 aa24.42■■□□□ 1.5
CLCF1-201ENST00000312438 PREX2Q70Z35 1606 aa24.42■■□□□ 1.5
CLCF1-201ENST00000312438 ANKRD30AQ9BXX3 1397 aa24.42■■□□□ 1.5
CLCF1-201ENST00000312438 TTC37Q6PGP7 1564 aa24.42■■□□□ 1.5
CLCF1-201ENST00000312438 ADGRL2O95490 1459 aa24.4■■□□□ 1.5
CLCF1-201ENST00000312438 WDR7Q9Y4E6 1490 aa24.4■■□□□ 1.5
CLCF1-201ENST00000312438 MBD5Q9P267 1494 aa24.4■■□□□ 1.5
CLCF1-201ENST00000312438 TRIM52Q96A61 297 aa24.4■■□□□ 1.5
CLCF1-201ENST00000312438 ARHGAP5Q13017 1502 aa24.39■■□□□ 1.5
CLCF1-201ENST00000312438 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
CLCF1-201ENST00000312438 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
CLCF1-201ENST00000312438 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
CLCF1-201ENST00000312438 ARHGEF5Q12774 1597 aa24.36■■□□□ 1.49
CLCF1-201ENST00000312438 PLEKHH2Q8IVE3 1493 aa24.36■■□□□ 1.49
CLCF1-201ENST00000312438 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
CLCF1-201ENST00000312438 TIMELESSQ9UNS1 1208 aa24.35■■□□□ 1.49
CLCF1-201ENST00000312438 C9orf84Q5VXU9 1444 aa24.35■■□□□ 1.49
CLCF1-201ENST00000312438 ASXL2Q76L83 1435 aa24.35■■□□□ 1.49
CLCF1-201ENST00000312438 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
CLCF1-201ENST00000312438 SIN3AQ96ST3 1273 aa24.33■■□□□ 1.49
CLCF1-201ENST00000312438 CCDC141Q6ZP82 1450 aa24.33■■□□□ 1.49
CLCF1-201ENST00000312438 KDM6BO15054 1643 aa24.32■■□□□ 1.48
CLCF1-201ENST00000312438 MYO5CQ9NQX4 1742 aa24.32■■□□□ 1.48
CLCF1-201ENST00000312438 CROCC2H7BZ55 1655 aa24.31■■□□□ 1.48
CLCF1-201ENST00000312438 NEUROD1Q13562 356 aa24.31■■□□□ 1.48
CLCF1-201ENST00000312438 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
CLCF1-201ENST00000312438 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
CLCF1-201ENST00000312438 ARAP3Q8WWN8 1544 aa24.28■■□□□ 1.48
CLCF1-201ENST00000312438 ANKRD50Q9ULJ7 1429 aa24.27■■□□□ 1.48
CLCF1-201ENST00000312438 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
CLCF1-201ENST00000312438 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
CLCF1-201ENST00000312438 CYB5RLQ6IPT4 315 aa24.24■■□□□ 1.47
CLCF1-201ENST00000312438 KIF15Q9NS87 1388 aa24.23■■□□□ 1.47
CLCF1-201ENST00000312438 ABCA9Q8IUA7 1624 aa24.22■■□□□ 1.47
CLCF1-201ENST00000312438 ARHGEF12Q9NZN5 1544 aa24.21■■□□□ 1.47
CLCF1-201ENST00000312438 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
CLCF1-201ENST00000312438 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.47
CLCF1-201ENST00000312438 MAST1Q9Y2H9 1570 aa24.18■■□□□ 1.46
CLCF1-201ENST00000312438 ABCC1P33527 1531 aa24.16■■□□□ 1.46
CLCF1-201ENST00000312438 FANCAO15360 1455 aa24.16■■□□□ 1.46
CLCF1-201ENST00000312438 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.46
CLCF1-201ENST00000312438 TONSLQ96HA7 1378 aa24.14■■□□□ 1.45
CLCF1-201ENST00000312438 PPP1R15AO75807 674 aaPredicted RBP24.13■■□□□ 1.45
CLCF1-201ENST00000312438 RIMBP3CA6NJZ7 1639 aa24.12■■□□□ 1.45
CLCF1-201ENST00000312438 RIMBP3BA6NNM3 1639 aa24.12■■□□□ 1.45
CLCF1-201ENST00000312438 RIMBP3Q9UFD9 1639 aa24.12■■□□□ 1.45
CLCF1-201ENST00000312438 PZPP20742 1482 aa24.11■■□□□ 1.45
CLCF1-201ENST00000312438 NUP155O75694 1391 aa24.11■■□□□ 1.45
CLCF1-201ENST00000312438 FOXD1Q16676 465 aa24.11■■□□□ 1.45
CLCF1-201ENST00000312438 CD109Q6YHK3 1445 aa24.11■■□□□ 1.45
CLCF1-201ENST00000312438 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
CLCF1-201ENST00000312438 ANKRD30BQ9BXX2 1392 aa24.11■■□□□ 1.45
CLCF1-201ENST00000312438 SPAG9O60271 1321 aaKnown RBP24.1■■□□□ 1.45
CLCF1-201ENST00000312438 RTEL1-TNFRSF6BF6WH68 1400 aa24.09■■□□□ 1.45
CLCF1-201ENST00000312438 SCAPERQ9BY12 1400 aa24.07■■□□□ 1.44
CLCF1-201ENST00000312438 PLXNC1O60486 1568 aa24.06■■□□□ 1.44
CLCF1-201ENST00000312438 ADGRL1O94910 1474 aa24.06■■□□□ 1.44
CLCF1-201ENST00000312438 PKD2Q13563 968 aa24.05■■□□□ 1.44
CLCF1-201ENST00000312438 DUOX2Q9NRD8 1548 aa24.04■■□□□ 1.44
CLCF1-201ENST00000312438 DIEXFQ68CQ4 756 aaKnown RBP24.04■■□□□ 1.44
CLCF1-201ENST00000312438 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
CLCF1-201ENST00000312438 ERBINQ96RT1 1412 aa24.01■■□□□ 1.43
CLCF1-201ENST00000312438 RPRD2Q5VT52 1461 aaKnown RBP23.97■■□□□ 1.43
CLCF1-201ENST00000312438 MYT1LQ9UL68 1186 aa23.96■■□□□ 1.43
CLCF1-201ENST00000312438 ZFYVE16Q7Z3T8 1539 aa23.94■■□□□ 1.42
CLCF1-201ENST00000312438 L3MBTL2Q969R5 705 aa23.94■■□□□ 1.42
CLCF1-201ENST00000312438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.94■■□□□ 1.42
CLCF1-201ENST00000312438 CFAP74Q9C0B2 1584 aa23.93■■□□□ 1.42
CLCF1-201ENST00000312438 ZNF518AQ6AHZ1 1483 aa23.93■■□□□ 1.42
CLCF1-201ENST00000312438 NEO1Q92859 1461 aa23.93■■□□□ 1.42
CLCF1-201ENST00000312438 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
CLCF1-201ENST00000312438 FAM135AQ9P2D6 1515 aa23.91■■□□□ 1.42
CLCF1-201ENST00000312438 GLI2P10070 1586 aa23.91■■□□□ 1.42
CLCF1-201ENST00000312438 UNC13BO14795 1591 aa23.9■■□□□ 1.42
CLCF1-201ENST00000312438 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.42
CLCF1-201ENST00000312438 INO80Q9ULG1 1556 aaPredicted RBP23.88■■□□□ 1.41
CLCF1-201ENST00000312438 DHX29Q7Z478 1369 aaKnown RBP23.88■■□□□ 1.41
CLCF1-201ENST00000312438 POGZQ7Z3K3 1410 aa23.87■■□□□ 1.41
CLCF1-201ENST00000312438 MAGI2Q86UL8 1455 aa23.85■■□□□ 1.41
CLCF1-201ENST00000312438 MLH3Q9UHC1 1453 aa23.83■■□□□ 1.41
CLCF1-201ENST00000312438 MAP3K4Q9Y6R4 1608 aa23.83■■□□□ 1.41
CLCF1-201ENST00000312438 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
CLCF1-201ENST00000312438 TEX14Q8IWB6 1497 aa23.81■■□□□ 1.4
CLCF1-201ENST00000312438 KIF3BO15066 747 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms