RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 ZNF644Q9H582 1327 aaPredicted RBP33.03■■■□□ 2.88
CTSF-201ENST00000310325 PTPRGP23470 1445 aa33.01■■■□□ 2.87
CTSF-201ENST00000310325 CFDP1Q9UEE9 299 aaPredicted RBP32.98■■■□□ 2.87
CTSF-201ENST00000310325 PLEKHD1A6NEE1 506 aa32.97■■■□□ 2.87
CTSF-201ENST00000310325 TONSLQ96HA7 1378 aa32.97■■■□□ 2.87
CTSF-201ENST00000310325 CDC42BPAQ5VT25 1732 aa32.96■■■□□ 2.87
CTSF-201ENST00000310325 PPP1R15AO75807 674 aaPredicted RBP32.96■■■□□ 2.87
CTSF-201ENST00000310325 CENPBP07199 599 aaPredicted RBP32.96■■■□□ 2.87
CTSF-201ENST00000310325 CROCC2H7BZ55 1655 aa32.95■■■□□ 2.86
CTSF-201ENST00000310325 ADGBQ8N7X0 1667 aa32.95■■■□□ 2.86
CTSF-201ENST00000310325 DENND4BO75064 1496 aaPredicted RBP32.94■■■□□ 2.86
CTSF-201ENST00000310325 ACIN1Q9UKV3 1341 aaKnown RBP32.94■■■□□ 2.86
CTSF-201ENST00000310325 ABCC10Q5T3U5 1492 aa32.93■■■□□ 2.86
CTSF-201ENST00000310325 TRIM52Q96A61 297 aa32.92■■■□□ 2.86
CTSF-201ENST00000310325 ADGRL2O95490 1459 aa32.84■■■□□ 2.85
CTSF-201ENST00000310325 MPHOSPH9Q99550 1183 aa32.82■■■□□ 2.84
CTSF-201ENST00000310325 ZNF777Q9ULD5 760 aaPredicted RBP32.82■■■□□ 2.84
CTSF-201ENST00000310325 SCAF1Q9H7N4 1312 aaKnown RBP32.81■■■□□ 2.84
CTSF-201ENST00000310325 NCOA1Q15788 1441 aa32.8■■■□□ 2.84
CTSF-201ENST00000310325 KDM5BQ9UGL1 1544 aa32.8■■■□□ 2.84
CTSF-201ENST00000310325 ERCC6L2Q5T890 1561 aa32.79■■■□□ 2.84
CTSF-201ENST00000310325 CLASP1Q7Z460 1538 aa32.78■■■□□ 2.84
CTSF-201ENST00000310325 SHANK2Q9UPX8 1470 aa32.74■■■□□ 2.83
CTSF-201ENST00000310325 ABCC2Q92887 1545 aa32.74■■■□□ 2.83
CTSF-201ENST00000310325 YTHDC1Q96MU7 727 aaKnown RBP32.72■■■□□ 2.83
CTSF-201ENST00000310325 PREX2Q70Z35 1606 aa32.71■■■□□ 2.83
CTSF-201ENST00000310325 ANKRD30AQ9BXX3 1397 aa32.71■■■□□ 2.83
CTSF-201ENST00000310325 CDC42BPBQ9Y5S2 1711 aa32.68■■■□□ 2.82
CTSF-201ENST00000310325 ARHGEF5Q12774 1597 aa32.67■■■□□ 2.82
CTSF-201ENST00000310325 ANKRD30BQ9BXX2 1392 aa32.64■■■□□ 2.82
CTSF-201ENST00000310325 C9orf84Q5VXU9 1444 aa32.64■■■□□ 2.82
CTSF-201ENST00000310325 PZPP20742 1482 aa32.63■■■□□ 2.81
CTSF-201ENST00000310325 SAMD9LQ8IVG5 1584 aa32.62■■■□□ 2.81
CTSF-201ENST00000310325 FOXD1Q16676 465 aa32.61■■■□□ 2.81
CTSF-201ENST00000310325 SLC4A1APQ9BWU0 796 aaKnown RBP32.61■■■□□ 2.81
CTSF-201ENST00000310325 RPRD2Q5VT52 1461 aaKnown RBP32.6■■■□□ 2.81
CTSF-201ENST00000310325 TTC37Q6PGP7 1564 aa32.6■■■□□ 2.81
CTSF-201ENST00000310325 ANKRD50Q9ULJ7 1429 aa32.58■■■□□ 2.81
CTSF-201ENST00000310325 MBD5Q9P267 1494 aa32.57■■■□□ 2.81
CTSF-201ENST00000310325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.57■■■□□ 2.8
CTSF-201ENST00000310325 UHRF1BP1LA0JNW5 1464 aa32.55■■■□□ 2.8
CTSF-201ENST00000310325 ZCCHC11Q5TAX3 1644 aaKnown RBP32.54■■■□□ 2.8
CTSF-201ENST00000310325 MYO5CQ9NQX4 1742 aa32.53■■■□□ 2.8
CTSF-201ENST00000310325 TSPY4P0CV99 314 aa32.53■■■□□ 2.8
CTSF-201ENST00000310325 TSPY10P0CW01 314 aa32.53■■■□□ 2.8
CTSF-201ENST00000310325 HIRIP3Q9BW71 556 aaPredicted RBP32.53■■■□□ 2.8
CTSF-201ENST00000310325 CCDC141Q6ZP82 1450 aa32.53■■■□□ 2.8
CTSF-201ENST00000310325 DDX10Q13206 875 aaKnown RBP32.52■■■□□ 2.8
CTSF-201ENST00000310325 HNRNPMP52272 730 aaKnown RBP eCLIP32.5■■■□□ 2.79
CTSF-201ENST00000310325 ARHGAP5Q13017 1502 aa32.49■■■□□ 2.79
CTSF-201ENST00000310325 TEX14Q8IWB6 1497 aa32.49■■■□□ 2.79
CTSF-201ENST00000310325 L3MBTL2Q969R5 705 aa32.48■■■□□ 2.79
CTSF-201ENST00000310325 KIAA1107Q9UPP5 1409 aa32.48■■■□□ 2.79
CTSF-201ENST00000310325 RSPH4AQ5TD94 716 aa32.46■■■□□ 2.79
CTSF-201ENST00000310325 SYCP2Q9BX26 1530 aa32.45■■■□□ 2.78
CTSF-201ENST00000310325 KDM5DQ9BY66 1539 aa32.45■■■□□ 2.78
CTSF-201ENST00000310325 KIF15Q9NS87 1388 aa32.44■■■□□ 2.78
CTSF-201ENST00000310325 GTF3C3Q9Y5Q9 886 aa32.43■■■□□ 2.78
CTSF-201ENST00000310325 MAST1Q9Y2H9 1570 aa32.42■■■□□ 2.78
CTSF-201ENST00000310325 PLEKHH2Q8IVE3 1493 aa32.39■■■□□ 2.78
CTSF-201ENST00000310325 PKD2Q13563 968 aa32.36■■■□□ 2.77
CTSF-201ENST00000310325 NUP155O75694 1391 aa32.36■■■□□ 2.77
CTSF-201ENST00000310325 KCNH8Q96L42 1107 aa32.33■■■□□ 2.77
CTSF-201ENST00000310325 HSPA5P11021 654 aaKnown RBP32.32■■■□□ 2.76
CTSF-201ENST00000310325 PLCH2O75038 1416 aa32.31■■■□□ 2.76
CTSF-201ENST00000310325 PLXNC1O60486 1568 aa32.3■■■□□ 2.76
CTSF-201ENST00000310325 EIF4G2P78344 907 aaKnown RBP eCLIP32.3■■■□□ 2.76
CTSF-201ENST00000310325 NBPF8Q3BBV2 869 aa32.27■■■□□ 2.76
CTSF-201ENST00000310325 ARHGEF12Q9NZN5 1544 aa32.23■■■□□ 2.75
CTSF-201ENST00000310325 UNC13BO14795 1591 aa32.23■■■□□ 2.75
CTSF-201ENST00000310325 ABCC1P33527 1531 aa32.22■■■□□ 2.75
CTSF-201ENST00000310325 FAM135AQ9P2D6 1515 aa32.21■■■□□ 2.75
CTSF-201ENST00000310325 ANP32CO43423 234 aa32.21■■■□□ 2.75
CTSF-201ENST00000310325 ARAP3Q8WWN8 1544 aa32.2■■■□□ 2.74
CTSF-201ENST00000310325 EFCAB2Q5VUJ9 269 aa32.19■■■□□ 2.74
CTSF-201ENST00000310325 WASHC2AQ641Q2 1341 aa32.17■■■□□ 2.74
CTSF-201ENST00000310325 WDR7Q9Y4E6 1490 aa32.15■■■□□ 2.74
CTSF-201ENST00000310325 DUOX2Q9NRD8 1548 aa32.15■■■□□ 2.74
CTSF-201ENST00000310325 CCER2I3L3R5 266 aa32.15■■■□□ 2.74
CTSF-201ENST00000310325 POLR1AO95602 1720 aaPredicted RBP32.13■■■□□ 2.73
CTSF-201ENST00000310325 SPATA31E1Q6ZUB1 1445 aa32.11■■■□□ 2.73
CTSF-201ENST00000310325 IQGAP3Q86VI3 1631 aa32.1■■■□□ 2.73
CTSF-201ENST00000310325 ERBINQ96RT1 1412 aa32.09■■■□□ 2.73
CTSF-201ENST00000310325 ABCA9Q8IUA7 1624 aa32.07■■■□□ 2.72
CTSF-201ENST00000310325 UHRF1BP1Q6BDS2 1440 aa32.07■■■□□ 2.72
CTSF-201ENST00000310325 TRAPPC8Q9Y2L5 1435 aa32.07■■■□□ 2.72
CTSF-201ENST00000310325 MAGI2Q86UL8 1455 aa32.05■■■□□ 2.72
CTSF-201ENST00000310325 CCDC7Q96M83 1385 aa32.04■■■□□ 2.72
CTSF-201ENST00000310325 CNTLNQ9NXG0 1405 aa32.02■■■□□ 2.72
CTSF-201ENST00000310325 RALGAPBQ86X10 1494 aa32■■■□□ 2.71
CTSF-201ENST00000310325 OSCARQ8IYS5 282 aa31.99■■■□□ 2.71
CTSF-201ENST00000310325 C11orf95C9JLR9 678 aaPredicted RBP31.99■■■□□ 2.71
CTSF-201ENST00000310325 RTEL1-TNFRSF6BF6WH68 1400 aa31.98■■■□□ 2.71
CTSF-201ENST00000310325 ZFYVE16Q7Z3T8 1539 aa31.97■■■□□ 2.71
CTSF-201ENST00000310325 ZNF326Q5BKZ1 582 aaKnown RBP31.97■■■□□ 2.71
CTSF-201ENST00000310325 KDM5CP41229 1560 aa31.97■■■□□ 2.71
CTSF-201ENST00000310325 ASXL2Q76L83 1435 aa31.96■■■□□ 2.71
CTSF-201ENST00000310325 FANCAO15360 1455 aa31.96■■■□□ 2.71
CTSF-201ENST00000310325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.95■■■□□ 2.71
CTSF-201ENST00000310325 CCDC144AA2RUR9 1427 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms