RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 GCC2Q8IWJ2 1684 aa34.78■■■■□ 3.16
SNCB-201ENST00000310112 ZCCHC11Q5TAX3 1644 aaKnown RBP34.75■■■■□ 3.15
SNCB-201ENST00000310112 ABCC5O15440 1437 aa34.73■■■■□ 3.15
SNCB-201ENST00000310112 PREX2Q70Z35 1606 aa34.68■■■■□ 3.14
SNCB-201ENST00000310112 ZNF644Q9H582 1327 aaPredicted RBP34.65■■■■□ 3.14
SNCB-201ENST00000310112 MAPKBP1O60336 1514 aa34.64■■■■□ 3.14
SNCB-201ENST00000310112 CROCC2H7BZ55 1655 aa34.63■■■■□ 3.13
SNCB-201ENST00000310112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.61■■■■□ 3.13
SNCB-201ENST00000310112 ADGBQ8N7X0 1667 aa34.61■■■■□ 3.13
SNCB-201ENST00000310112 ADGRL2O95490 1459 aa34.6■■■■□ 3.13
SNCB-201ENST00000310112 SHANK2Q9UPX8 1470 aa34.6■■■■□ 3.13
SNCB-201ENST00000310112 ARHGEF5Q12774 1597 aa34.59■■■■□ 3.13
SNCB-201ENST00000310112 CHIC2Q9UKJ5 165 aa34.58■■■■□ 3.13
SNCB-201ENST00000310112 CDC42BPBQ9Y5S2 1711 aa34.57■■■■□ 3.12
SNCB-201ENST00000310112 RSPH4AQ5TD94 716 aa34.56■■■■□ 3.12
SNCB-201ENST00000310112 RRP7BPQ9NSQ0 103 aa34.56■■■■□ 3.12
SNCB-201ENST00000310112 MYO5CQ9NQX4 1742 aa34.56■■■■□ 3.12
SNCB-201ENST00000310112 TTC37Q6PGP7 1564 aa34.55■■■■□ 3.12
SNCB-201ENST00000310112 ZNF777Q9ULD5 760 aaPredicted RBP34.55■■■■□ 3.12
SNCB-201ENST00000310112 PLEKHH2Q8IVE3 1493 aa34.53■■■■□ 3.12
SNCB-201ENST00000310112 NCOA1Q15788 1441 aa34.49■■■■□ 3.11
SNCB-201ENST00000310112 ANKRD30AQ9BXX3 1397 aa34.49■■■■□ 3.11
SNCB-201ENST00000310112 TIMELESSQ9UNS1 1208 aa34.49■■■■□ 3.11
SNCB-201ENST00000310112 SAMD9LQ8IVG5 1584 aa34.48■■■■□ 3.11
SNCB-201ENST00000310112 ARAP3Q8WWN8 1544 aa34.48■■■■□ 3.11
SNCB-201ENST00000310112 WDR7Q9Y4E6 1490 aa34.47■■■■□ 3.11
SNCB-201ENST00000310112 ARHGAP5Q13017 1502 aa34.47■■■■□ 3.11
SNCB-201ENST00000310112 PLCH2O75038 1416 aa34.46■■■■□ 3.11
SNCB-201ENST00000310112 KIAA1107Q9UPP5 1409 aa34.45■■■■□ 3.11
SNCB-201ENST00000310112 MBD5Q9P267 1494 aa34.44■■■■□ 3.1
SNCB-201ENST00000310112 CCDC141Q6ZP82 1450 aa34.43■■■■□ 3.1
SNCB-201ENST00000310112 TSPY4P0CV99 314 aa34.41■■■■□ 3.1
SNCB-201ENST00000310112 TSPY10P0CW01 314 aa34.41■■■■□ 3.1
SNCB-201ENST00000310112 C9orf84Q5VXU9 1444 aa34.41■■■■□ 3.1
SNCB-201ENST00000310112 KCNH8Q96L42 1107 aa34.39■■■■□ 3.1
SNCB-201ENST00000310112 KDM6BO15054 1643 aa34.38■■■■□ 3.09
SNCB-201ENST00000310112 NPM1P06748 294 aaKnown RBP eCLIP34.36■■■■□ 3.09
SNCB-201ENST00000310112 MAST1Q9Y2H9 1570 aa34.36■■■■□ 3.09
SNCB-201ENST00000310112 EFCAB2Q5VUJ9 269 aa34.36■■■■□ 3.09
SNCB-201ENST00000310112 ABCA9Q8IUA7 1624 aa34.33■■■■□ 3.09
SNCB-201ENST00000310112 ASXL2Q76L83 1435 aa34.31■■■■□ 3.08
SNCB-201ENST00000310112 HNRNPMP52272 730 aaKnown RBP eCLIP34.31■■■■□ 3.08
SNCB-201ENST00000310112 TRIM52Q96A61 297 aa34.31■■■■□ 3.08
SNCB-201ENST00000310112 SYCP2Q9BX26 1530 aa34.3■■■■□ 3.08
SNCB-201ENST00000310112 ZNF316A6NFI3 1004 aaPredicted RBP34.26■■■■□ 3.08
SNCB-201ENST00000310112 ANKRD50Q9ULJ7 1429 aa34.26■■■■□ 3.07
SNCB-201ENST00000310112 ABCC1P33527 1531 aa34.24■■■■□ 3.07
SNCB-201ENST00000310112 MPHOSPH9Q99550 1183 aa34.23■■■■□ 3.07
SNCB-201ENST00000310112 PLXNC1O60486 1568 aa34.19■■■■□ 3.06
SNCB-201ENST00000310112 SIN3AQ96ST3 1273 aa34.19■■■■□ 3.06
SNCB-201ENST00000310112 KIF15Q9NS87 1388 aa34.19■■■■□ 3.06
SNCB-201ENST00000310112 DENND4BO75064 1496 aaPredicted RBP34.18■■■■□ 3.06
SNCB-201ENST00000310112 NEUROD1Q13562 356 aa34.14■■■■□ 3.06
SNCB-201ENST00000310112 KDM5DQ9BY66 1539 aa34.13■■■■□ 3.05
SNCB-201ENST00000310112 ARHGEF12Q9NZN5 1544 aa34.13■■■■□ 3.05
SNCB-201ENST00000310112 TONSLQ96HA7 1378 aa34.1■■■■□ 3.05
SNCB-201ENST00000310112 FANCAO15360 1455 aa34.1■■■■□ 3.05
SNCB-201ENST00000310112 PZPP20742 1482 aa34.1■■■■□ 3.05
SNCB-201ENST00000310112 RTEL1-TNFRSF6BF6WH68 1400 aa34.08■■■■□ 3.05
SNCB-201ENST00000310112 SLC4A1APQ9BWU0 796 aaKnown RBP34.07■■■■□ 3.04
SNCB-201ENST00000310112 RIMBP3CA6NJZ7 1639 aa34.06■■■■□ 3.04
SNCB-201ENST00000310112 RIMBP3BA6NNM3 1639 aa34.06■■■■□ 3.04
SNCB-201ENST00000310112 RIMBP3Q9UFD9 1639 aa34.06■■■■□ 3.04
SNCB-201ENST00000310112 CFAP74Q9C0B2 1584 aa34.05■■■■□ 3.04
SNCB-201ENST00000310112 DUOX2Q9NRD8 1548 aa34.05■■■■□ 3.04
SNCB-201ENST00000310112 ANKRD30BQ9BXX2 1392 aa34.03■■■■□ 3.04
SNCB-201ENST00000310112 PPP1R15AO75807 674 aaPredicted RBP34.02■■■■□ 3.04
SNCB-201ENST00000310112 TRAPPC8Q9Y2L5 1435 aa34■■■■□ 3.03
SNCB-201ENST00000310112 ERBINQ96RT1 1412 aa33.99■■■■□ 3.03
SNCB-201ENST00000310112 NUP155O75694 1391 aa33.96■■■■□ 3.03
SNCB-201ENST00000310112 ADGRL1O94910 1474 aa33.96■■■■□ 3.03
SNCB-201ENST00000310112 UNC13BO14795 1591 aa33.95■■■■□ 3.03
SNCB-201ENST00000310112 CD109Q6YHK3 1445 aa33.95■■■■□ 3.03
SNCB-201ENST00000310112 SPAG9O60271 1321 aaKnown RBP33.94■■■■□ 3.02
SNCB-201ENST00000310112 DIEXFQ68CQ4 756 aaKnown RBP33.94■■■■□ 3.02
SNCB-201ENST00000310112 RPRD2Q5VT52 1461 aaKnown RBP33.93■■■■□ 3.02
SNCB-201ENST00000310112 ZFYVE16Q7Z3T8 1539 aa33.91■■■■□ 3.02
SNCB-201ENST00000310112 SCAPERQ9BY12 1400 aa33.9■■■■□ 3.02
SNCB-201ENST00000310112 INO80Q9ULG1 1556 aaPredicted RBP33.88■■■■□ 3.01
SNCB-201ENST00000310112 CYB5RLQ6IPT4 315 aa33.88■■■■□ 3.01
SNCB-201ENST00000310112 GLI2P10070 1586 aa33.87■■■■□ 3.01
SNCB-201ENST00000310112 PKD2Q13563 968 aa33.85■■■■□ 3.01
SNCB-201ENST00000310112 ATP7AQ04656 1500 aa33.85■■■■□ 3.01
SNCB-201ENST00000310112 MAGI2Q86UL8 1455 aa33.84■■■■□ 3.01
SNCB-201ENST00000310112 NEO1Q92859 1461 aa33.84■■■■□ 3.01
SNCB-201ENST00000310112 FAM135AQ9P2D6 1515 aa33.83■■■■□ 3.01
SNCB-201ENST00000310112 ZNF518AQ6AHZ1 1483 aa33.83■■■■□ 3.01
SNCB-201ENST00000310112 IQGAP3Q86VI3 1631 aa33.81■■■■□ 3
SNCB-201ENST00000310112 FOXD1Q16676 465 aa33.81■■■■□ 3
SNCB-201ENST00000310112 AFAP1Q8N556 730 aa33.81■■■■□ 3
SNCB-201ENST00000310112 MAP3K4Q9Y6R4 1608 aa33.77■■■■□ 3
SNCB-201ENST00000310112 EIF2AK4Q9P2K8 1649 aaKnown RBP33.73■■■□□ 2.99
SNCB-201ENST00000310112 TEX14Q8IWB6 1497 aa33.73■■■□□ 2.99
SNCB-201ENST00000310112 KDM5CP41229 1560 aa33.73■■■□□ 2.99
SNCB-201ENST00000310112 POGZQ7Z3K3 1410 aa33.73■■■□□ 2.99
SNCB-201ENST00000310112 MLH3Q9UHC1 1453 aa33.68■■■□□ 2.98
SNCB-201ENST00000310112 DHX29Q7Z478 1369 aaKnown RBP33.68■■■□□ 2.98
SNCB-201ENST00000310112 L3MBTL2Q969R5 705 aa33.68■■■□□ 2.98
SNCB-201ENST00000310112 DEPDC5O75140 1603 aa33.68■■■□□ 2.98
SNCB-201ENST00000310112 KIDINS220Q9ULH0 1771 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms