RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 HSP90B1P14625 803 aaKnown RBP4.08□□□□□ -1.76
CLOCK-201ENST00000309964 FANCD2Q9BXW9 1451 aa4.08□□□□□ -1.76
CLOCK-201ENST00000309964 FAM9BQ8IZU0 186 aa4.08□□□□□ -1.76
CLOCK-201ENST00000309964 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.08□□□□□ -1.76
CLOCK-201ENST00000309964 CCDC88BA6NC98 1476 aa4.08□□□□□ -1.76
CLOCK-201ENST00000309964 ATAD2BQ9ULI0 1458 aa4.08□□□□□ -1.76
CLOCK-201ENST00000309964 VGFO15240 615 aaPredicted RBP4.08□□□□□ -1.76
CLOCK-201ENST00000309964 SRPK2P78362 688 aaKnown RBP4.08□□□□□ -1.76
CLOCK-201ENST00000309964 RRP7BPQ9NSQ0 103 aa4.08□□□□□ -1.76
CLOCK-201ENST00000309964 PTMSP20962 102 aa4.07□□□□□ -1.76
CLOCK-201ENST00000309964 JPH4Q96JJ6 628 aa4.07□□□□□ -1.76
CLOCK-201ENST00000309964 LAMC3Q9Y6N6 1575 aa4.07□□□□□ -1.76
CLOCK-201ENST00000309964 WASHC2CQ9Y4E1 1318 aa4.07□□□□□ -1.76
CLOCK-201ENST00000309964 RGL3Q3MIN7 710 aa4.07□□□□□ -1.76
CLOCK-201ENST00000309964 HTATSF1O43719 755 aaKnown RBP4.07□□□□□ -1.76
CLOCK-201ENST00000309964 KIF3AQ9Y496 699 aa4.07□□□□□ -1.76
CLOCK-201ENST00000309964 ARXQ96QS3 562 aa4.07□□□□□ -1.76
CLOCK-201ENST00000309964 HMGXB3Q12766 1538 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 USP35Q9P2H5 1018 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 SCAPERQ9BY12 1400 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 PLEKHH2Q8IVE3 1493 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 PPM1GO15355 546 aaPredicted RBP4.06□□□□□ -1.76
CLOCK-201ENST00000309964 DDX10Q13206 875 aaKnown RBP4.06□□□□□ -1.76
CLOCK-201ENST00000309964 GPATCH3Q96I76 525 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 MROH2BQ7Z745 1585 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 FGD1P98174 961 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 GAPVD1Q14C86 1478 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 OS9Q13438 667 aaPredicted RBP4.06□□□□□ -1.76
CLOCK-201ENST00000309964 GGT6Q6P531 493 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 TRIM44Q96DX7 344 aaPredicted RBP4.06□□□□□ -1.76
CLOCK-201ENST00000309964 BCL11AQ9H165 835 aa4.06□□□□□ -1.76
CLOCK-201ENST00000309964 CHAF1AQ13111 956 aaPredicted RBP4.05□□□□□ -1.76
CLOCK-201ENST00000309964 KIF21BO75037 1637 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 POGZQ7Z3K3 1410 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 NCAPD3P42695 1498 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 ERICH6BQ5W0A0 696 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 ZBTB7CA1YPR0 619 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 RALBP1Q15311 655 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 DCAF11Q8TEB1 546 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 PTPRGP23470 1445 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 KCNJ4P48050 445 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 CUL7Q14999 1698 aa4.05□□□□□ -1.76
CLOCK-201ENST00000309964 CCDC144AA2RUR9 1427 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 GRIN2BQ13224 1484 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 SYNJ2O15056 1496 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 HMMRO75330 724 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 SMC4Q9NTJ3 1288 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 NUP155O75694 1391 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 KTN1Q86UP2 1357 aaKnown RBP4.04□□□□□ -1.76
CLOCK-201ENST00000309964 G3V3G9 751 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 DCAF8Q5TAQ9 597 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 KIAA1211Q6ZU35 1233 aa4.04□□□□□ -1.76
CLOCK-201ENST00000309964 STK31Q9BXU1 1019 aa4.03□□□□□ -1.76
CLOCK-201ENST00000309964 MIA2Q96PC5 1412 aa4.03□□□□□ -1.76
CLOCK-201ENST00000309964 EFCAB5A4FU69 1503 aa4.03□□□□□ -1.76
CLOCK-201ENST00000309964 KIF3BO15066 747 aa4.03□□□□□ -1.76
CLOCK-201ENST00000309964 MORC1Q86VD1 984 aa4.03□□□□□ -1.76
CLOCK-201ENST00000309964 AMOTL1Q8IY63 956 aa4.03□□□□□ -1.76
CLOCK-201ENST00000309964 NGDNQ8NEJ9 315 aaKnown RBP4.03□□□□□ -1.76
CLOCK-201ENST00000309964 MYOM3Q5VTT5 1437 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 CSB-PGBD3P0DP91 1061 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 KIAA2012Q0VF49 1180 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 U2SURPO15042 1029 aaKnown RBP4.02□□□□□ -1.77
CLOCK-201ENST00000309964 EVC2Q86UK5 1308 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 IFT140Q96RY7 1462 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 CSPP1Q1MSJ5 1256 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 GOLGA6L4A6NEF3 574 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 SUPT6HQ7KZ85 1726 aaKnown RBP4.02□□□□□ -1.77
CLOCK-201ENST00000309964 ERICH3Q5RHP9 1530 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 PAK3O75914 559 aaPredicted RBP4.02□□□□□ -1.77
CLOCK-201ENST00000309964 MLECQ14165 292 aa4.02□□□□□ -1.77
CLOCK-201ENST00000309964 RRBP1Q9P2E9 1410 aaKnown RBP4.02□□□□□ -1.77
CLOCK-201ENST00000309964 ROCK1Q13464 1354 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 TDRD9Q8NDG6 1382 aaKnown RBP4.01□□□□□ -1.77
CLOCK-201ENST00000309964 CC2D2AQ9P2K1 1620 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 CCER2I3L3R5 266 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 GTF2E1P29083 439 aaPredicted RBP4.01□□□□□ -1.77
CLOCK-201ENST00000309964 MRC2Q9UBG0 1479 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 EVA1CP58658 441 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 AMPHP49418 695 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 NEXNQ0ZGT2 675 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 AAMPQ13685 434 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 TAF7LQ5H9L4 462 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 GTF3C3Q9Y5Q9 886 aa4.01□□□□□ -1.77
CLOCK-201ENST00000309964 FKBP8Q14318 412 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 CGNL1Q0VF96 1302 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 ATF3P18847 181 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 GORABQ5T7V8 394 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 SYAP1Q96A49 352 aaPredicted RBP4□□□□□ -1.77
CLOCK-201ENST00000309964 TNNT2P45379 298 aaPredicted RBP4□□□□□ -1.77
CLOCK-201ENST00000309964 PDE3BQ13370 1112 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 GNL2Q13823 731 aaKnown RBP4□□□□□ -1.77
CLOCK-201ENST00000309964 DMRT2Q9Y5R5 561 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 HECW1Q76N89 1606 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 SALL2Q9Y467 1007 aaPredicted RBP4□□□□□ -1.77
CLOCK-201ENST00000309964 PSME1Q06323 249 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 C1orf141Q5JVX7 400 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 THEMISQ8N1K5 641 aaPredicted RBP4□□□□□ -1.77
CLOCK-201ENST00000309964 PMFBP1Q8TBY8 1022 aa4□□□□□ -1.77
CLOCK-201ENST00000309964 TPM4P67936 248 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms