RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 PDE3BQ13370 1112 aa23.07■■□□□ 1.28
ATP2A3-201ENST00000309890 NLRP13Q86W25 1043 aa23.07■■□□□ 1.28
ATP2A3-201ENST00000309890 CARMIL2Q6F5E8 1435 aa23.07■■□□□ 1.28
ATP2A3-201ENST00000309890 IPO9Q96P70 1041 aaKnown RBP23.06■■□□□ 1.28
ATP2A3-201ENST00000309890 KANK1Q14678 1352 aa23.06■■□□□ 1.28
ATP2A3-201ENST00000309890 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
ATP2A3-201ENST00000309890 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
ATP2A3-201ENST00000309890 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
ATP2A3-201ENST00000309890 PNNQ9H307 717 aaKnown RBP23.04■■□□□ 1.28
ATP2A3-201ENST00000309890 POGKQ9P215 609 aa23.04■■□□□ 1.28
ATP2A3-201ENST00000309890 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
ATP2A3-201ENST00000309890 MORC1Q86VD1 984 aa23.03■■□□□ 1.28
ATP2A3-201ENST00000309890 HSP90AB1P08238 724 aaKnown RBP23■■□□□ 1.27
ATP2A3-201ENST00000309890 ZBED9Q6R2W3 1325 aa23■■□□□ 1.27
ATP2A3-201ENST00000309890 KIF21BO75037 1637 aa22.98■■□□□ 1.27
ATP2A3-201ENST00000309890 HSCBQ8IWL3 235 aa22.98■■□□□ 1.27
ATP2A3-201ENST00000309890 L1TD1Q5T7N2 865 aaKnown RBP22.98■■□□□ 1.27
ATP2A3-201ENST00000309890 PTMAP06454 111 aaKnown RBP22.96■■□□□ 1.27
ATP2A3-201ENST00000309890 NAP1L5Q96NT1 182 aaPredicted RBP22.95■■□□□ 1.26
ATP2A3-201ENST00000309890 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
ATP2A3-201ENST00000309890 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
ATP2A3-201ENST00000309890 ARID4BQ4LE39 1312 aaPredicted RBP22.94■■□□□ 1.26
ATP2A3-201ENST00000309890 GOLGA2Q08379 1002 aa22.92■■□□□ 1.26
ATP2A3-201ENST00000309890 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
ATP2A3-201ENST00000309890 FANCIQ9NVI1 1328 aa22.92■■□□□ 1.26
ATP2A3-201ENST00000309890 IGF1RP08069 1367 aa22.91■■□□□ 1.26
ATP2A3-201ENST00000309890 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
ATP2A3-201ENST00000309890 C14orf37Q86TY3 774 aa22.88■■□□□ 1.25
ATP2A3-201ENST00000309890 RWDD1Q9H446 243 aaPredicted RBP22.88■■□□□ 1.25
ATP2A3-201ENST00000309890 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
ATP2A3-201ENST00000309890 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
ATP2A3-201ENST00000309890 SRPK2P78362 688 aaKnown RBP22.87■■□□□ 1.25
ATP2A3-201ENST00000309890 IPO8O15397 1037 aaKnown RBP22.86■■□□□ 1.25
ATP2A3-201ENST00000309890 CFAP44Q96MT7 982 aa22.85■■□□□ 1.25
ATP2A3-201ENST00000309890 FGD6Q6ZV73 1430 aa22.84■■□□□ 1.25
ATP2A3-201ENST00000309890 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
ATP2A3-201ENST00000309890 DNTTIP2Q5QJE6 756 aaKnown RBP22.84■■□□□ 1.25
ATP2A3-201ENST00000309890 UACAQ9BZF9 1416 aa22.83■■□□□ 1.25
ATP2A3-201ENST00000309890 HAP1P54257 671 aaPredicted RBP22.83■■□□□ 1.25
ATP2A3-201ENST00000309890 USP47Q96K76 1375 aa22.83■■□□□ 1.24
ATP2A3-201ENST00000309890 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.24
ATP2A3-201ENST00000309890 PMFBP1Q8TBY8 1022 aa22.83■■□□□ 1.24
ATP2A3-201ENST00000309890 U2AF1L5P0DN76 240 aaPredicted RBP22.82■■□□□ 1.24
ATP2A3-201ENST00000309890 U2AF1Q01081 240 aaKnown RBP eCLIP22.82■■□□□ 1.24
ATP2A3-201ENST00000309890 USP35Q9P2H5 1018 aa22.82■■□□□ 1.24
ATP2A3-201ENST00000309890 LRRC9Q6ZRR7 1453 aa22.81■■□□□ 1.24
ATP2A3-201ENST00000309890 ZBTB7CA1YPR0 619 aa22.81■■□□□ 1.24
ATP2A3-201ENST00000309890 RRBP1Q9P2E9 1410 aaKnown RBP22.81■■□□□ 1.24
ATP2A3-201ENST00000309890 SLKQ9H2G2 1235 aaPredicted RBP22.8■■□□□ 1.24
ATP2A3-201ENST00000309890 SPRYD3Q8NCJ5 442 aa22.8■■□□□ 1.24
ATP2A3-201ENST00000309890 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
ATP2A3-201ENST00000309890 RRP1P56182 461 aaKnown RBP22.79■■□□□ 1.24
ATP2A3-201ENST00000309890 PDE4AP27815 886 aa22.78■■□□□ 1.24
ATP2A3-201ENST00000309890 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
ATP2A3-201ENST00000309890 MYOM3Q5VTT5 1437 aa22.76■■□□□ 1.23
ATP2A3-201ENST00000309890 SAFB2Q14151 953 aaKnown RBP eCLIP22.76■■□□□ 1.23
ATP2A3-201ENST00000309890 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
ATP2A3-201ENST00000309890 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
ATP2A3-201ENST00000309890 CENPJQ9HC77 1338 aaPredicted RBP22.75■■□□□ 1.23
ATP2A3-201ENST00000309890 CCDC144AA2RUR9 1427 aa22.75■■□□□ 1.23
ATP2A3-201ENST00000309890 EXOC6Q8TAG9 804 aa22.75■■□□□ 1.23
ATP2A3-201ENST00000309890 GBP4Q96PP9 640 aa22.75■■□□□ 1.23
ATP2A3-201ENST00000309890 GGT6Q6P531 493 aa22.74■■□□□ 1.23
ATP2A3-201ENST00000309890 CENPQQ7L2Z9 268 aaPredicted RBP22.74■■□□□ 1.23
ATP2A3-201ENST00000309890 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
ATP2A3-201ENST00000309890 ZRSR1Q15695 479 aaKnown RBP22.74■■□□□ 1.23
ATP2A3-201ENST00000309890 PANK3Q9H999 370 aa22.74■■□□□ 1.23
ATP2A3-201ENST00000309890 HDGFL2Q7Z4V5 671 aaPredicted RBP22.74■■□□□ 1.23
ATP2A3-201ENST00000309890 CALD1Q05682 793 aaKnown RBP22.73■■□□□ 1.23
ATP2A3-201ENST00000309890 ITPRIPQ8IWB1 547 aa22.73■■□□□ 1.23
ATP2A3-201ENST00000309890 PTMSP20962 102 aa22.72■■□□□ 1.23
ATP2A3-201ENST00000309890 CCDC146Q8IYE0 955 aa22.72■■□□□ 1.23
ATP2A3-201ENST00000309890 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
ATP2A3-201ENST00000309890 CUX1P39880 1505 aa22.72■■□□□ 1.23
ATP2A3-201ENST00000309890 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
ATP2A3-201ENST00000309890 TPRNQ4KMQ1 711 aa22.71■■□□□ 1.23
ATP2A3-201ENST00000309890 KIF7Q2M1P5 1343 aa22.7■■□□□ 1.22
ATP2A3-201ENST00000309890 PLEKHG5O94827 1062 aa22.7■■□□□ 1.22
ATP2A3-201ENST00000309890 MCCP23508 829 aa22.69■■□□□ 1.22
ATP2A3-201ENST00000309890 MSNP26038 577 aaKnown RBP22.68■■□□□ 1.22
ATP2A3-201ENST00000309890 FAM161AQ3B820 660 aa22.68■■□□□ 1.22
ATP2A3-201ENST00000309890 PLCB2Q00722 1185 aa22.68■■□□□ 1.22
ATP2A3-201ENST00000309890 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
ATP2A3-201ENST00000309890 STK26Q9P289 416 aa22.68■■□□□ 1.22
ATP2A3-201ENST00000309890 KIF3BO15066 747 aa22.68■■□□□ 1.22
ATP2A3-201ENST00000309890 OS9Q13438 667 aaPredicted RBP22.67■■□□□ 1.22
ATP2A3-201ENST00000309890 CASKIN1Q8WXD9 1431 aa22.66■■□□□ 1.22
ATP2A3-201ENST00000309890 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
ATP2A3-201ENST00000309890 CLUAP1Q96AJ1 413 aa22.66■■□□□ 1.22
ATP2A3-201ENST00000309890 SPAG9O60271 1321 aaKnown RBP22.66■■□□□ 1.22
ATP2A3-201ENST00000309890 WASHC2AQ641Q2 1341 aa22.66■■□□□ 1.22
ATP2A3-201ENST00000309890 PLIN1O60240 522 aa22.65■■□□□ 1.22
ATP2A3-201ENST00000309890 GZF1Q9H116 711 aaPredicted RBP22.65■■□□□ 1.22
ATP2A3-201ENST00000309890 HDGFP51858 240 aaKnown RBP22.64■■□□□ 1.21
ATP2A3-201ENST00000309890 MFAP1P55081 439 aaKnown RBP22.64■■□□□ 1.21
ATP2A3-201ENST00000309890 CRBNQ96SW2 442 aa22.64■■□□□ 1.21
ATP2A3-201ENST00000309890 KCNJ4P48050 445 aa22.64■■□□□ 1.21
ATP2A3-201ENST00000309890 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
ATP2A3-201ENST00000309890 GOLGA6L3A6NEY3 463 aa22.62■■□□□ 1.21
ATP2A3-201ENST00000309890 E9PSI1 815 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms