RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 ABCC5O15440 1437 aa28.14■■■□□ 2.09
LRFN4-201ENST00000309602 PRG4Q92954 1404 aaPredicted RBP28.13■■■□□ 2.09
LRFN4-201ENST00000309602 TROQ12816 1431 aaPredicted RBP28.12■■■□□ 2.09
LRFN4-201ENST00000309602 ROCK1Q13464 1354 aa28.12■■■□□ 2.09
LRFN4-201ENST00000309602 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
LRFN4-201ENST00000309602 MPHOSPH9Q99550 1183 aa28.09■■■□□ 2.09
LRFN4-201ENST00000309602 CARMIL2Q6F5E8 1435 aa28.09■■■□□ 2.09
LRFN4-201ENST00000309602 KIF14Q15058 1648 aa28.02■■■□□ 2.08
LRFN4-201ENST00000309602 ADCY10Q96PN6 1610 aa28.01■■■□□ 2.07
LRFN4-201ENST00000309602 CAMSAP2Q08AD1 1489 aa28.01■■■□□ 2.07
LRFN4-201ENST00000309602 GPATCH8Q9UKJ3 1502 aaKnown RBP28■■■□□ 2.07
LRFN4-201ENST00000309602 FOXD1Q16676 465 aa28■■■□□ 2.07
LRFN4-201ENST00000309602 ITSN2Q9NZM3 1697 aa28■■■□□ 2.07
LRFN4-201ENST00000309602 CFDP1Q9UEE9 299 aaPredicted RBP27.99■■■□□ 2.07
LRFN4-201ENST00000309602 ABCA8O94911 1581 aa27.95■■■□□ 2.06
LRFN4-201ENST00000309602 ANKRD30BQ9BXX2 1392 aa27.93■■■□□ 2.06
LRFN4-201ENST00000309602 ANP32CO43423 234 aa27.92■■■□□ 2.06
LRFN4-201ENST00000309602 L3MBTL2Q969R5 705 aa27.9■■■□□ 2.06
LRFN4-201ENST00000309602 ZNF777Q9ULD5 760 aaPredicted RBP27.9■■■□□ 2.06
LRFN4-201ENST00000309602 CCER2I3L3R5 266 aa27.89■■■□□ 2.05
LRFN4-201ENST00000309602 NCOA1Q15788 1441 aa27.89■■■□□ 2.05
LRFN4-201ENST00000309602 ADGBQ8N7X0 1667 aa27.88■■■□□ 2.05
LRFN4-201ENST00000309602 ATP10BO94823 1461 aa27.88■■■□□ 2.05
LRFN4-201ENST00000309602 RPRD2Q5VT52 1461 aaKnown RBP27.87■■■□□ 2.05
LRFN4-201ENST00000309602 HSPA5P11021 654 aaKnown RBP27.87■■■□□ 2.05
LRFN4-201ENST00000309602 SLC4A1APQ9BWU0 796 aaKnown RBP27.87■■■□□ 2.05
LRFN4-201ENST00000309602 CROCC2H7BZ55 1655 aa27.86■■■□□ 2.05
LRFN4-201ENST00000309602 ADGRL2O95490 1459 aa27.85■■■□□ 2.05
LRFN4-201ENST00000309602 PLEKHD1A6NEE1 506 aa27.85■■■□□ 2.05
LRFN4-201ENST00000309602 PZPP20742 1482 aa27.83■■■□□ 2.05
LRFN4-201ENST00000309602 ABCC10Q5T3U5 1492 aa27.83■■■□□ 2.05
LRFN4-201ENST00000309602 SUPT16HQ9Y5B9 1047 aaKnown RBP27.82■■■□□ 2.04
LRFN4-201ENST00000309602 CDC42BPAQ5VT25 1732 aa27.82■■■□□ 2.04
LRFN4-201ENST00000309602 TEX14Q8IWB6 1497 aa27.81■■■□□ 2.04
LRFN4-201ENST00000309602 EIF4G2P78344 907 aaKnown RBP eCLIP27.79■■■□□ 2.04
LRFN4-201ENST00000309602 WASHC2AQ641Q2 1341 aa27.79■■■□□ 2.04
LRFN4-201ENST00000309602 ANKRD30AQ9BXX3 1397 aa27.77■■■□□ 2.04
LRFN4-201ENST00000309602 NBPF8Q3BBV2 869 aa27.75■■■□□ 2.03
LRFN4-201ENST00000309602 PTPRGP23470 1445 aa27.75■■■□□ 2.03
LRFN4-201ENST00000309602 CHD1O14646 1710 aa27.72■■■□□ 2.03
LRFN4-201ENST00000309602 ANKRD50Q9ULJ7 1429 aa27.7■■■□□ 2.03
LRFN4-201ENST00000309602 SHANK2Q9UPX8 1470 aa27.7■■■□□ 2.02
LRFN4-201ENST00000309602 KIAA1107Q9UPP5 1409 aa27.69■■■□□ 2.02
LRFN4-201ENST00000309602 C9orf84Q5VXU9 1444 aa27.68■■■□□ 2.02
LRFN4-201ENST00000309602 C11orf95C9JLR9 678 aaPredicted RBP27.64■■■□□ 2.02
LRFN4-201ENST00000309602 PKD2Q13563 968 aa27.64■■■□□ 2.02
LRFN4-201ENST00000309602 CNTLNQ9NXG0 1405 aa27.61■■■□□ 2.01
LRFN4-201ENST00000309602 CCDC7Q96M83 1385 aa27.61■■■□□ 2.01
LRFN4-201ENST00000309602 MYT1Q01538 1121 aa27.61■■■□□ 2.01
LRFN4-201ENST00000309602 SPATA31E1Q6ZUB1 1445 aa27.6■■■□□ 2.01
LRFN4-201ENST00000309602 HNRNPMP52272 730 aaKnown RBP eCLIP27.6■■■□□ 2.01
LRFN4-201ENST00000309602 MBD5Q9P267 1494 aa27.6■■■□□ 2.01
LRFN4-201ENST00000309602 TSPY4P0CV99 314 aa27.59■■■□□ 2.01
LRFN4-201ENST00000309602 TSPY10P0CW01 314 aa27.59■■■□□ 2.01
LRFN4-201ENST00000309602 ARHGEF5Q12774 1597 aa27.59■■■□□ 2.01
LRFN4-201ENST00000309602 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
LRFN4-201ENST00000309602 NUP155O75694 1391 aa27.57■■■□□ 2
LRFN4-201ENST00000309602 CDC42BPBQ9Y5S2 1711 aa27.56■■■□□ 2
LRFN4-201ENST00000309602 SAMD9LQ8IVG5 1584 aa27.56■■■□□ 2
LRFN4-201ENST00000309602 PREX2Q70Z35 1606 aa27.55■■■□□ 2
LRFN4-201ENST00000309602 KIF15Q9NS87 1388 aa27.54■■■□□ 2
LRFN4-201ENST00000309602 KDM5DQ9BY66 1539 aa27.53■■■□□ 2
LRFN4-201ENST00000309602 CCDC141Q6ZP82 1450 aa27.51■■□□□ 1.99
LRFN4-201ENST00000309602 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
LRFN4-201ENST00000309602 KIF7Q2M1P5 1343 aa27.49■■□□□ 1.99
LRFN4-201ENST00000309602 POLR1AO95602 1720 aaPredicted RBP27.48■■□□□ 1.99
LRFN4-201ENST00000309602 TTC37Q6PGP7 1564 aa27.47■■□□□ 1.99
LRFN4-201ENST00000309602 FKBP8Q14318 412 aa27.45■■□□□ 1.98
LRFN4-201ENST00000309602 ZNF326Q5BKZ1 582 aaKnown RBP27.45■■□□□ 1.98
LRFN4-201ENST00000309602 ABCC2Q92887 1545 aa27.44■■□□□ 1.98
LRFN4-201ENST00000309602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.43■■□□□ 1.98
LRFN4-201ENST00000309602 PRKRIP1Q9H875 184 aaPredicted RBP27.42■■□□□ 1.98
LRFN4-201ENST00000309602 SYCP2Q9BX26 1530 aa27.42■■□□□ 1.98
LRFN4-201ENST00000309602 RSPH4AQ5TD94 716 aa27.42■■□□□ 1.98
LRFN4-201ENST00000309602 USP47Q96K76 1375 aa27.41■■□□□ 1.98
LRFN4-201ENST00000309602 CCDC184Q52MB2 194 aa27.41■■□□□ 1.98
LRFN4-201ENST00000309602 ARHGAP5Q13017 1502 aa27.41■■□□□ 1.98
LRFN4-201ENST00000309602 HNRNPUQ00839 825 aaKnown RBP eCLIP27.4■■□□□ 1.98
LRFN4-201ENST00000309602 UHRF1BP1Q6BDS2 1440 aa27.4■■□□□ 1.98
LRFN4-201ENST00000309602 BCANQ96GW7 911 aa27.38■■□□□ 1.97
LRFN4-201ENST00000309602 ARHGEF12Q9NZN5 1544 aa27.37■■□□□ 1.97
LRFN4-201ENST00000309602 KDM5CP41229 1560 aa27.36■■□□□ 1.97
LRFN4-201ENST00000309602 BCORL1Q5H9F3 1711 aa27.36■■□□□ 1.97
LRFN4-201ENST00000309602 FAM135AQ9P2D6 1515 aa27.36■■□□□ 1.97
LRFN4-201ENST00000309602 MAST1Q9Y2H9 1570 aa27.35■■□□□ 1.97
LRFN4-201ENST00000309602 RALGAPBQ86X10 1494 aa27.35■■□□□ 1.97
LRFN4-201ENST00000309602 NEFLP07196 543 aa27.33■■□□□ 1.97
LRFN4-201ENST00000309602 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.97
LRFN4-201ENST00000309602 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
LRFN4-201ENST00000309602 PLEKHH2Q8IVE3 1493 aa27.28■■□□□ 1.96
LRFN4-201ENST00000309602 MRS2Q9HD23 443 aa27.27■■□□□ 1.96
LRFN4-201ENST00000309602 KDM2AQ9Y2K7 1162 aa27.27■■□□□ 1.96
LRFN4-201ENST00000309602 UNC13BO14795 1591 aa27.27■■□□□ 1.96
LRFN4-201ENST00000309602 ZCCHC11Q5TAX3 1644 aaKnown RBP27.26■■□□□ 1.95
LRFN4-201ENST00000309602 DHX29Q7Z478 1369 aaKnown RBP27.26■■□□□ 1.95
LRFN4-201ENST00000309602 PLXNC1O60486 1568 aa27.25■■□□□ 1.95
LRFN4-201ENST00000309602 DCAF11Q8TEB1 546 aa27.25■■□□□ 1.95
LRFN4-201ENST00000309602 CARD11Q9BXL7 1154 aa27.25■■□□□ 1.95
LRFN4-201ENST00000309602 POLR3GLQ9BT43 218 aa27.24■■□□□ 1.95
LRFN4-201ENST00000309602 ARID4BQ4LE39 1312 aaPredicted RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms