RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
SEC23A-201ENST00000307712 TIAM1Q13009 1591 aa17.55■□□□□ 0.4
SEC23A-201ENST00000307712 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
SEC23A-201ENST00000307712 MAPKBP1O60336 1514 aa17.55■□□□□ 0.4
SEC23A-201ENST00000307712 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
SEC23A-201ENST00000307712 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
SEC23A-201ENST00000307712 C11orf95C9JLR9 678 aaPredicted RBP17.53■□□□□ 0.4
SEC23A-201ENST00000307712 NBPF8Q3BBV2 869 aa17.53■□□□□ 0.4
SEC23A-201ENST00000307712 NLRP13Q86W25 1043 aa17.52■□□□□ 0.4
SEC23A-201ENST00000307712 NEUROD2Q15784 382 aa17.52■□□□□ 0.4
SEC23A-201ENST00000307712 ANO8Q9HCE9 1232 aaPredicted RBP17.52■□□□□ 0.4
SEC23A-201ENST00000307712 USP35Q9P2H5 1018 aa17.52■□□□□ 0.4
SEC23A-201ENST00000307712 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.39
SEC23A-201ENST00000307712 IL27Q8NEV9 243 aa17.52■□□□□ 0.39
SEC23A-201ENST00000307712 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.39
SEC23A-201ENST00000307712 USP47Q96K76 1375 aa17.51■□□□□ 0.39
SEC23A-201ENST00000307712 CUX1P39880 1505 aa17.51■□□□□ 0.39
SEC23A-201ENST00000307712 MYOM3Q5VTT5 1437 aa17.51■□□□□ 0.39
SEC23A-201ENST00000307712 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
SEC23A-201ENST00000307712 FRAT1Q92837 279 aaPredicted RBP17.49■□□□□ 0.39
SEC23A-201ENST00000307712 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
SEC23A-201ENST00000307712 MYBBP1AQ9BQG0 1328 aaKnown RBP17.48■□□□□ 0.39
SEC23A-201ENST00000307712 NUP155O75694 1391 aa17.48■□□□□ 0.39
SEC23A-201ENST00000307712 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
SEC23A-201ENST00000307712 PDE3BQ13370 1112 aa17.48■□□□□ 0.39
SEC23A-201ENST00000307712 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
SEC23A-201ENST00000307712 HFM1A2PYH4 1435 aa17.46■□□□□ 0.39
SEC23A-201ENST00000307712 KIF15Q9NS87 1388 aa17.46■□□□□ 0.39
SEC23A-201ENST00000307712 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
SEC23A-201ENST00000307712 SLKQ9H2G2 1235 aaPredicted RBP17.46■□□□□ 0.39
SEC23A-201ENST00000307712 TMF1P82094 1093 aa17.45■□□□□ 0.38
SEC23A-201ENST00000307712 GSE1Q14687 1217 aa17.45■□□□□ 0.38
SEC23A-201ENST00000307712 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
SEC23A-201ENST00000307712 ZNF644Q9H582 1327 aaPredicted RBP17.45■□□□□ 0.38
SEC23A-201ENST00000307712 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
SEC23A-201ENST00000307712 MS4A1P11836 297 aa17.43■□□□□ 0.38
SEC23A-201ENST00000307712 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
SEC23A-201ENST00000307712 ANP32BQ92688 251 aaKnown RBP17.43■□□□□ 0.38
SEC23A-201ENST00000307712 NAP1L5Q96NT1 182 aaPredicted RBP17.42■□□□□ 0.38
SEC23A-201ENST00000307712 NAIPQ13075 1403 aa17.41■□□□□ 0.38
SEC23A-201ENST00000307712 CDCA7LQ96GN5 454 aa17.4■□□□□ 0.38
SEC23A-201ENST00000307712 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
SEC23A-201ENST00000307712 CFTRP13569 1480 aa17.4■□□□□ 0.38
SEC23A-201ENST00000307712 FYCO1Q9BQS8 1478 aa17.4■□□□□ 0.38
SEC23A-201ENST00000307712 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
SEC23A-201ENST00000307712 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
SEC23A-201ENST00000307712 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
SEC23A-201ENST00000307712 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
SEC23A-201ENST00000307712 NFKBIBQ15653 356 aa17.36■□□□□ 0.37
SEC23A-201ENST00000307712 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
SEC23A-201ENST00000307712 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
SEC23A-201ENST00000307712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
SEC23A-201ENST00000307712 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
SEC23A-201ENST00000307712 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
SEC23A-201ENST00000307712 TRIM44Q96DX7 344 aaPredicted RBP17.36■□□□□ 0.37
SEC23A-201ENST00000307712 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
SEC23A-201ENST00000307712 PANK3Q9H999 370 aa17.35■□□□□ 0.37
SEC23A-201ENST00000307712 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
SEC23A-201ENST00000307712 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
SEC23A-201ENST00000307712 BACH2Q9BYV9 841 aa17.35■□□□□ 0.37
SEC23A-201ENST00000307712 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.36
SEC23A-201ENST00000307712 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
SEC23A-201ENST00000307712 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
SEC23A-201ENST00000307712 MAP3K1Q13233 1512 aa17.31■□□□□ 0.36
SEC23A-201ENST00000307712 L1TD1Q5T7N2 865 aaKnown RBP17.31■□□□□ 0.36
SEC23A-201ENST00000307712 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
SEC23A-201ENST00000307712 PCF11O94913 1555 aaKnown RBP17.3■□□□□ 0.36
SEC23A-201ENST00000307712 HNRNPMP52272 730 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■□□ 16
SEC23A-201ENST00000307712 PRKCSHP14314 528 aaPredicted RBP17.28■□□□□ 0.36
SEC23A-201ENST00000307712 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
SEC23A-201ENST00000307712 PTPRKQ15262 1439 aa17.27■□□□□ 0.35
SEC23A-201ENST00000307712 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
SEC23A-201ENST00000307712 BICRAQ9NZM4 1560 aa17.25■□□□□ 0.35
SEC23A-201ENST00000307712 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
SEC23A-201ENST00000307712 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
SEC23A-201ENST00000307712 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
SEC23A-201ENST00000307712 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
SEC23A-201ENST00000307712 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
SEC23A-201ENST00000307712 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
SEC23A-201ENST00000307712 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
SEC23A-201ENST00000307712 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■■□ 22.1
SEC23A-201ENST00000307712 ADAMTS8Q9UP79 889 aa17.21■□□□□ 0.35
SEC23A-201ENST00000307712 APAF1O14727 1248 aa17.2■□□□□ 0.34
SEC23A-201ENST00000307712 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
SEC23A-201ENST00000307712 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
SEC23A-201ENST00000307712 COG6Q9Y2V7 657 aa17.2■□□□□ 0.34
SEC23A-201ENST00000307712 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
SEC23A-201ENST00000307712 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
SEC23A-201ENST00000307712 ANKRD30BQ9BXX2 1392 aa17.19■□□□□ 0.34
SEC23A-201ENST00000307712 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
SEC23A-201ENST00000307712 GOLGA6L3A6NEY3 463 aa17.19■□□□□ 0.34
SEC23A-201ENST00000307712 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
SEC23A-201ENST00000307712 CENPJQ9HC77 1338 aaPredicted RBP17.18■□□□□ 0.34
SEC23A-201ENST00000307712 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
SEC23A-201ENST00000307712 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
SEC23A-201ENST00000307712 BCL2L13Q9BXK5 485 aa17.17■□□□□ 0.34
SEC23A-201ENST00000307712 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
SEC23A-201ENST00000307712 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
SEC23A-201ENST00000307712 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
SEC23A-201ENST00000307712 NBPF1Q3BBV0 1214 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms