RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
CHRNA7-201ENST00000306901 CHMP4BQ9H444 224 aaKnown RBP18.1■□□□□ 0.49
CHRNA7-201ENST00000306901 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
CHRNA7-201ENST00000306901 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.49
CHRNA7-201ENST00000306901 POGKQ9P215 609 aa18.08■□□□□ 0.48
CHRNA7-201ENST00000306901 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
CHRNA7-201ENST00000306901 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
CHRNA7-201ENST00000306901 ITPRIPQ8IWB1 547 aa18.05■□□□□ 0.48
CHRNA7-201ENST00000306901 A0A0U1RQG5 324 aaPredicted RBP18.05■□□□□ 0.48
CHRNA7-201ENST00000306901 CREBRFQ8IUR6 639 aa18.04■□□□□ 0.48
CHRNA7-201ENST00000306901 GOLGA6L1Q8N7Z2 621 aa18.04■□□□□ 0.48
CHRNA7-201ENST00000306901 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
CHRNA7-201ENST00000306901 PTMSP20962 102 aa18.03■□□□□ 0.48
CHRNA7-201ENST00000306901 KIAA1211Q6ZU35 1233 aa18.02■□□□□ 0.47
CHRNA7-201ENST00000306901 TCERG1O14776 1098 aaKnown RBP18.01■□□□□ 0.47
CHRNA7-201ENST00000306901 HSPA5P11021 654 aaKnown RBP18.01■□□□□ 0.47
CHRNA7-201ENST00000306901 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
CHRNA7-201ENST00000306901 SAFB2Q14151 953 aaKnown RBP eCLIP18■□□□□ 0.47
CHRNA7-201ENST00000306901 SYAP1Q96A49 352 aaPredicted RBP18■□□□□ 0.47
CHRNA7-201ENST00000306901 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
CHRNA7-201ENST00000306901 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
CHRNA7-201ENST00000306901 CCER2I3L3R5 266 aa17.99■□□□□ 0.47
CHRNA7-201ENST00000306901 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
CHRNA7-201ENST00000306901 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
CHRNA7-201ENST00000306901 PATL2C9JE40 543 aaKnown RBP17.97■□□□□ 0.47
CHRNA7-201ENST00000306901 TMF1P82094 1093 aa17.97■□□□□ 0.47
CHRNA7-201ENST00000306901 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
CHRNA7-201ENST00000306901 CFDP1Q9UEE9 299 aaPredicted RBP17.97■□□□□ 0.47
CHRNA7-201ENST00000306901 GOLGA3Q08378 1498 aa17.97■□□□□ 0.47
CHRNA7-201ENST00000306901 TPM4P67936 248 aa17.95■□□□□ 0.46
CHRNA7-201ENST00000306901 ZNF771Q7L3S4 317 aaPredicted RBP17.95■□□□□ 0.46
CHRNA7-201ENST00000306901 FOXD4L6Q3SYB3 417 aaPredicted RBP17.95■□□□□ 0.46
CHRNA7-201ENST00000306901 FOXD4L3Q6VB84 417 aaPredicted RBP17.95■□□□□ 0.46
CHRNA7-201ENST00000306901 RWDD1Q9H446 243 aaPredicted RBP17.95■□□□□ 0.46
CHRNA7-201ENST00000306901 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
CHRNA7-201ENST00000306901 TRIM6-TRIM34B2RNG4 842 aa17.93■□□□□ 0.46
CHRNA7-201ENST00000306901 PRM3Q9NNZ6 103 aa17.93■□□□□ 0.46
CHRNA7-201ENST00000306901 FOXD1Q16676 465 aa17.92■□□□□ 0.46
CHRNA7-201ENST00000306901 CCAR2Q8N163 923 aaKnown RBP17.91■□□□□ 0.46
CHRNA7-201ENST00000306901 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
CHRNA7-201ENST00000306901 CLUAP1Q96AJ1 413 aa17.91■□□□□ 0.46
CHRNA7-201ENST00000306901 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
CHRNA7-201ENST00000306901 GSE1Q14687 1217 aa17.89■□□□□ 0.45
CHRNA7-201ENST00000306901 BCL11BQ9C0K0 894 aaPredicted RBP17.89■□□□□ 0.45
CHRNA7-201ENST00000306901 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
CHRNA7-201ENST00000306901 SETQ01105 290 aaPredicted RBP17.88■□□□□ 0.45
CHRNA7-201ENST00000306901 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
CHRNA7-201ENST00000306901 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
CHRNA7-201ENST00000306901 ZNF592Q92610 1267 aa17.88■□□□□ 0.45
CHRNA7-201ENST00000306901 KTN1Q86UP2 1357 aaKnown RBP17.87■□□□□ 0.45
CHRNA7-201ENST00000306901 IPO8O15397 1037 aaKnown RBP17.87■□□□□ 0.45
CHRNA7-201ENST00000306901 ZNF330Q9Y3S2 320 aaPredicted RBP17.87■□□□□ 0.45
CHRNA7-201ENST00000306901 FAM13BQ9NYF5 915 aa17.86■□□□□ 0.45
CHRNA7-201ENST00000306901 PMFBP1Q8TBY8 1022 aa17.86■□□□□ 0.45
CHRNA7-201ENST00000306901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.84■□□□□ 0.45
CHRNA7-201ENST00000306901 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
CHRNA7-201ENST00000306901 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHRNA7-201ENST00000306901 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.44
CHRNA7-201ENST00000306901 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
CHRNA7-201ENST00000306901 STK26Q9P289 416 aa17.82■□□□□ 0.44
CHRNA7-201ENST00000306901 PES1O00541 588 aaKnown RBP17.82■□□□□ 0.44
CHRNA7-201ENST00000306901 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
CHRNA7-201ENST00000306901 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
CHRNA7-201ENST00000306901 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
CHRNA7-201ENST00000306901 DDX49Q9Y6V7 483 aaKnown RBP17.81■□□□□ 0.44
CHRNA7-201ENST00000306901 TPM3P06753 285 aa17.8■□□□□ 0.44
CHRNA7-201ENST00000306901 DDX11L8A8MPP1 907 aa17.8■□□□□ 0.44
CHRNA7-201ENST00000306901 PLIN1O60240 522 aa17.8■□□□□ 0.44
CHRNA7-201ENST00000306901 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
CHRNA7-201ENST00000306901 PHF14O94880 888 aa17.79■□□□□ 0.44
CHRNA7-201ENST00000306901 CSPP1Q1MSJ5 1256 aa17.79■□□□□ 0.44
CHRNA7-201ENST00000306901 PDE4AP27815 886 aa17.78■□□□□ 0.44
CHRNA7-201ENST00000306901 CCDC9Q9Y3X0 531 aaKnown RBP17.76■□□□□ 0.43
CHRNA7-201ENST00000306901 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
CHRNA7-201ENST00000306901 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
CHRNA7-201ENST00000306901 ST18O60284 1047 aa17.74■□□□□ 0.43
CHRNA7-201ENST00000306901 SF3A1Q15459 793 aaKnown RBP17.74■□□□□ 0.43
CHRNA7-201ENST00000306901 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
CHRNA7-201ENST00000306901 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
CHRNA7-201ENST00000306901 TNIKQ9UKE5 1360 aa17.73■□□□□ 0.43
CHRNA7-201ENST00000306901 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
CHRNA7-201ENST00000306901 TPD52L1Q16890 204 aaPredicted RBP17.72■□□□□ 0.43
CHRNA7-201ENST00000306901 GOLGA6L19H0YKK7 550 aa17.71■□□□□ 0.43
CHRNA7-201ENST00000306901 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
CHRNA7-201ENST00000306901 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
CHRNA7-201ENST00000306901 CALRP27797 417 aaKnown RBP17.71■□□□□ 0.43
CHRNA7-201ENST00000306901 RILPL2Q969X0 211 aa17.71■□□□□ 0.43
CHRNA7-201ENST00000306901 H3BQV1 296 aa17.71■□□□□ 0.42
CHRNA7-201ENST00000306901 IFFO2Q5TF58 517 aa17.71■□□□□ 0.42
CHRNA7-201ENST00000306901 FBXW7Q969H0 707 aa17.71■□□□□ 0.42
CHRNA7-201ENST00000306901 GPATCH3Q96I76 525 aa17.71■□□□□ 0.42
CHRNA7-201ENST00000306901 ROCK2O75116 1388 aaKnown RBP17.7■□□□□ 0.42
CHRNA7-201ENST00000306901 RRP7AQ9Y3A4 280 aaKnown RBP17.7■□□□□ 0.42
CHRNA7-201ENST00000306901 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
CHRNA7-201ENST00000306901 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
CHRNA7-201ENST00000306901 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
CHRNA7-201ENST00000306901 RALBP1Q15311 655 aa17.69■□□□□ 0.42
CHRNA7-201ENST00000306901 FAM161AQ3B820 660 aa17.69■□□□□ 0.42
CHRNA7-201ENST00000306901 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
CHRNA7-201ENST00000306901 MLECQ14165 292 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms