RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
TRIM56-201ENST00000306085 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
TRIM56-201ENST00000306085 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
TRIM56-201ENST00000306085 CCDC34Q96HJ3 373 aa16.86■□□□□ 0.29
TRIM56-201ENST00000306085 VPS53Q5VIR6 699 aa16.85■□□□□ 0.29
TRIM56-201ENST00000306085 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
TRIM56-201ENST00000306085 CDCA8Q53HL2 280 aa16.82■□□□□ 0.28
TRIM56-201ENST00000306085 PHF14O94880 888 aa16.81■□□□□ 0.28
TRIM56-201ENST00000306085 CCDC70Q6NSX1 233 aa16.81■□□□□ 0.28
TRIM56-201ENST00000306085 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
TRIM56-201ENST00000306085 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
TRIM56-201ENST00000306085 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
TRIM56-201ENST00000306085 APPP05067 770 aa16.79■□□□□ 0.28
TRIM56-201ENST00000306085 GPS2Q13227 327 aa16.79■□□□□ 0.28
TRIM56-201ENST00000306085 TSR1Q2NL82 804 aaKnown RBP16.79■□□□□ 0.28
TRIM56-201ENST00000306085 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.28
TRIM56-201ENST00000306085 SOX12O15370 315 aa16.77■□□□□ 0.28
TRIM56-201ENST00000306085 CSPP1Q1MSJ5 1256 aa16.76■□□□□ 0.27
TRIM56-201ENST00000306085 POGKQ9P215 609 aa16.76■□□□□ 0.27
TRIM56-201ENST00000306085 NOL8Q76FK4 1167 aaKnown RBP16.76■□□□□ 0.27
TRIM56-201ENST00000306085 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
TRIM56-201ENST00000306085 MTUS2Q5JR59 1369 aa16.76■□□□□ 0.27
TRIM56-201ENST00000306085 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
TRIM56-201ENST00000306085 MAP7D2Q96T17 732 aa16.74■□□□□ 0.27
TRIM56-201ENST00000306085 CALD1Q05682 793 aaKnown RBP16.74■□□□□ 0.27
TRIM56-201ENST00000306085 TEX35Q5T0J7 233 aa16.74■□□□□ 0.27
TRIM56-201ENST00000306085 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
TRIM56-201ENST00000306085 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
TRIM56-201ENST00000306085 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
TRIM56-201ENST00000306085 ZNF592Q92610 1267 aa16.73■□□□□ 0.27
TRIM56-201ENST00000306085 MARCH6O60337 910 aa16.71■□□□□ 0.27
TRIM56-201ENST00000306085 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
TRIM56-201ENST00000306085 GPATCH3Q96I76 525 aa16.71■□□□□ 0.27
TRIM56-201ENST00000306085 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
TRIM56-201ENST00000306085 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
TRIM56-201ENST00000306085 GORABQ5T7V8 394 aa16.71■□□□□ 0.26
TRIM56-201ENST00000306085 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.26
TRIM56-201ENST00000306085 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
TRIM56-201ENST00000306085 TMX4Q9H1E5 349 aaPredicted RBP16.7■□□□□ 0.26
TRIM56-201ENST00000306085 MFAP1P55081 439 aaKnown RBP16.69■□□□□ 0.26
TRIM56-201ENST00000306085 NOM1Q5C9Z4 860 aaKnown RBP16.69■□□□□ 0.26
TRIM56-201ENST00000306085 TPM1P09493 284 aa16.68■□□□□ 0.26
TRIM56-201ENST00000306085 RTF1Q92541 710 aaKnown RBP16.67■□□□□ 0.26
TRIM56-201ENST00000306085 TPM2P07951 284 aa16.67■□□□□ 0.26
TRIM56-201ENST00000306085 ITPRIPQ8IWB1 547 aa16.67■□□□□ 0.26
TRIM56-201ENST00000306085 SF3A1Q15459 793 aaKnown RBP16.66■□□□□ 0.26
TRIM56-201ENST00000306085 GOLGA6L19H0YKK7 550 aa16.66■□□□□ 0.26
TRIM56-201ENST00000306085 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
TRIM56-201ENST00000306085 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
TRIM56-201ENST00000306085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.263e-6■■■■■ 46.4
TRIM56-201ENST00000306085 TIMELESSQ9UNS1 1208 aa16.65■□□□□ 0.26
TRIM56-201ENST00000306085 HMMRO75330 724 aa16.65■□□□□ 0.26
TRIM56-201ENST00000306085 PKNOX2Q96KN3 472 aa16.65■□□□□ 0.26
TRIM56-201ENST00000306085 PLCD4Q9BRC7 762 aa16.65■□□□□ 0.26
TRIM56-201ENST00000306085 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
TRIM56-201ENST00000306085 RUFY1Q96T51 708 aa16.64■□□□□ 0.25
TRIM56-201ENST00000306085 TCEAL9Q9UHQ7 104 aa16.63■□□□□ 0.25
TRIM56-201ENST00000306085 G3V3G9 751 aa16.63■□□□□ 0.25
TRIM56-201ENST00000306085 DCAF8Q5TAQ9 597 aa16.63■□□□□ 0.25
TRIM56-201ENST00000306085 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
TRIM56-201ENST00000306085 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
TRIM56-201ENST00000306085 CCDC191Q8NCU4 936 aa16.62■□□□□ 0.25
TRIM56-201ENST00000306085 PCMTD1Q96MG8 357 aaPredicted RBP16.62■□□□□ 0.25
TRIM56-201ENST00000306085 AK7Q96M32 723 aa16.62■□□□□ 0.25
TRIM56-201ENST00000306085 H3BQV1 296 aa16.61■□□□□ 0.25
TRIM56-201ENST00000306085 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
TRIM56-201ENST00000306085 FAM13BQ9NYF5 915 aa16.61■□□□□ 0.25
TRIM56-201ENST00000306085 IPO8O15397 1037 aaKnown RBP16.6■□□□□ 0.25
TRIM56-201ENST00000306085 FOXD4L6Q3SYB3 417 aaPredicted RBP16.59■□□□□ 0.25
TRIM56-201ENST00000306085 FOXD4L3Q6VB84 417 aaPredicted RBP16.59■□□□□ 0.25
TRIM56-201ENST00000306085 BECN2A8MW95 431 aa16.58■□□□□ 0.25
TRIM56-201ENST00000306085 IPO7O95373 1038 aaKnown RBP16.58■□□□□ 0.25
TRIM56-201ENST00000306085 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
TRIM56-201ENST00000306085 RDXP35241 583 aaKnown RBP16.58■□□□□ 0.24
TRIM56-201ENST00000306085 H0YHG0 523 aa16.58■□□□□ 0.24
TRIM56-201ENST00000306085 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
TRIM56-201ENST00000306085 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRIM56-201ENST00000306085 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
TRIM56-201ENST00000306085 DDX11L8A8MPP1 907 aa16.57■□□□□ 0.24
TRIM56-201ENST00000306085 TCERG1O14776 1098 aaKnown RBP16.56■□□□□ 0.24
TRIM56-201ENST00000306085 RWDD1Q9H446 243 aaPredicted RBP16.55■□□□□ 0.24
TRIM56-201ENST00000306085 ST18O60284 1047 aa16.55■□□□□ 0.24
TRIM56-201ENST00000306085 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
TRIM56-201ENST00000306085 NAP1L1P55209 391 aaKnown RBP16.55■□□□□ 0.24
TRIM56-201ENST00000306085 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
TRIM56-201ENST00000306085 CDR1P51861 262 aa16.54■□□□□ 0.24
TRIM56-201ENST00000306085 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
TRIM56-201ENST00000306085 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
TRIM56-201ENST00000306085 MORC1Q86VD1 984 aa16.53■□□□□ 0.24
TRIM56-201ENST00000306085 MCTP1Q6DN14 999 aa16.53■□□□□ 0.24
TRIM56-201ENST00000306085 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.24
TRIM56-201ENST00000306085 DCTN1Q14203 1278 aa16.52■□□□□ 0.23
TRIM56-201ENST00000306085 ABCC9O60706 1549 aa16.52■□□□□ 0.23
TRIM56-201ENST00000306085 CT47A1Q5JQC4 288 aaPredicted RBP16.51■□□□□ 0.23
TRIM56-201ENST00000306085 ODF2Q5BJF6 829 aa16.51■□□□□ 0.23
TRIM56-201ENST00000306085 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
TRIM56-201ENST00000306085 SAFB2Q14151 953 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRIM56-201ENST00000306085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
TRIM56-201ENST00000306085 CCDC9Q9Y3X0 531 aaKnown RBP16.5■□□□□ 0.23
TRIM56-201ENST00000306085 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms