RNA–Protein interactions for RNA: ENST00000304101.8

KCNS3-201, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-201ENST00000304101 RIMBP3BA6NNM3 1639 aa29.75■■■□□ 2.35
KCNS3-201ENST00000304101 RIMBP3Q9UFD9 1639 aa29.75■■■□□ 2.35
KCNS3-201ENST00000304101 TTC37Q6PGP7 1564 aa29.73■■■□□ 2.35
KCNS3-201ENST00000304101 CENPBP07199 599 aaPredicted RBP29.73■■■□□ 2.35
KCNS3-201ENST00000304101 ACIN1Q9UKV3 1341 aaKnown RBP29.73■■■□□ 2.35
KCNS3-201ENST00000304101 CDC42BPAQ5VT25 1732 aa29.72■■■□□ 2.35
KCNS3-201ENST00000304101 HFM1A2PYH4 1435 aa29.72■■■□□ 2.35
KCNS3-201ENST00000304101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.72■■■□□ 2.35
KCNS3-201ENST00000304101 SCAF1Q9H7N4 1312 aaKnown RBP29.71■■■□□ 2.35
KCNS3-201ENST00000304101 MIER1Q8N108 512 aa29.71■■■□□ 2.35
KCNS3-201ENST00000304101 ITSN2Q9NZM3 1697 aa29.7■■■□□ 2.34
KCNS3-201ENST00000304101 CAMSAP2Q08AD1 1489 aa29.69■■■□□ 2.34
KCNS3-201ENST00000304101 NPM1P06748 294 aaKnown RBP eCLIP29.68■■■□□ 2.34
KCNS3-201ENST00000304101 ASXL2Q76L83 1435 aa29.67■■■□□ 2.34
KCNS3-201ENST00000304101 NEUROD1Q13562 356 aa29.66■■■□□ 2.34
KCNS3-201ENST00000304101 RRP7BPQ9NSQ0 103 aa29.66■■■□□ 2.34
KCNS3-201ENST00000304101 WDR7Q9Y4E6 1490 aa29.65■■■□□ 2.34
KCNS3-201ENST00000304101 ABCC5O15440 1437 aa29.61■■■□□ 2.33
KCNS3-201ENST00000304101 DAPK1P53355 1430 aa29.61■■■□□ 2.33
KCNS3-201ENST00000304101 NAIPQ13075 1403 aa29.61■■■□□ 2.33
KCNS3-201ENST00000304101 SIN3AQ96ST3 1273 aa29.6■■■□□ 2.33
KCNS3-201ENST00000304101 TIMELESSQ9UNS1 1208 aa29.6■■■□□ 2.33
KCNS3-201ENST00000304101 CDC42BPBQ9Y5S2 1711 aa29.59■■■□□ 2.33
KCNS3-201ENST00000304101 HNRNPMP52272 730 aaKnown RBP eCLIP29.59■■■□□ 2.33
KCNS3-201ENST00000304101 ARHGAP5Q13017 1502 aa29.58■■■□□ 2.33
KCNS3-201ENST00000304101 PREX2Q70Z35 1606 aa29.57■■■□□ 2.32
KCNS3-201ENST00000304101 DNMT1P26358 1616 aaKnown RBP29.55■■■□□ 2.32
KCNS3-201ENST00000304101 SAMD9LQ8IVG5 1584 aa29.53■■■□□ 2.32
KCNS3-201ENST00000304101 MYO5CQ9NQX4 1742 aa29.51■■■□□ 2.31
KCNS3-201ENST00000304101 PLCH2O75038 1416 aa29.48■■■□□ 2.31
KCNS3-201ENST00000304101 AKNAQ7Z591 1439 aa29.48■■■□□ 2.31
KCNS3-201ENST00000304101 GCC2Q8IWJ2 1684 aa29.47■■■□□ 2.31
KCNS3-201ENST00000304101 YTHDC1Q96MU7 727 aaKnown RBP29.45■■■□□ 2.3
KCNS3-201ENST00000304101 SYCP2Q9BX26 1530 aa29.44■■■□□ 2.3
KCNS3-201ENST00000304101 KDM6BO15054 1643 aa29.44■■■□□ 2.3
KCNS3-201ENST00000304101 MBD5Q9P267 1494 aa29.43■■■□□ 2.3
KCNS3-201ENST00000304101 EFCAB2Q5VUJ9 269 aa29.41■■■□□ 2.3
KCNS3-201ENST00000304101 ARHGEF12Q9NZN5 1544 aa29.39■■■□□ 2.3
KCNS3-201ENST00000304101 ABCA9Q8IUA7 1624 aa29.39■■■□□ 2.3
KCNS3-201ENST00000304101 PPP1R15AO75807 674 aaPredicted RBP29.38■■■□□ 2.29
KCNS3-201ENST00000304101 CROCC2H7BZ55 1655 aa29.37■■■□□ 2.29
KCNS3-201ENST00000304101 C9orf84Q5VXU9 1444 aa29.36■■■□□ 2.29
KCNS3-201ENST00000304101 TSPY4P0CV99 314 aa29.36■■■□□ 2.29
KCNS3-201ENST00000304101 TSPY10P0CW01 314 aa29.36■■■□□ 2.29
KCNS3-201ENST00000304101 TONSLQ96HA7 1378 aa29.36■■■□□ 2.29
KCNS3-201ENST00000304101 ROCK1Q13464 1354 aa29.35■■■□□ 2.29
KCNS3-201ENST00000304101 NCOA1Q15788 1441 aa29.34■■■□□ 2.29
KCNS3-201ENST00000304101 FANCAO15360 1455 aa29.33■■■□□ 2.29
KCNS3-201ENST00000304101 CCDC141Q6ZP82 1450 aa29.33■■■□□ 2.29
KCNS3-201ENST00000304101 TRIM52Q96A61 297 aa29.31■■■□□ 2.28
KCNS3-201ENST00000304101 ARHGEF5Q12774 1597 aa29.3■■■□□ 2.28
KCNS3-201ENST00000304101 GTF3C3Q9Y5Q9 886 aa29.3■■■□□ 2.28
KCNS3-201ENST00000304101 CD109Q6YHK3 1445 aa29.3■■■□□ 2.28
KCNS3-201ENST00000304101 TRAPPC8Q9Y2L5 1435 aa29.29■■■□□ 2.28
KCNS3-201ENST00000304101 ANKRD30AQ9BXX3 1397 aa29.28■■■□□ 2.28
KCNS3-201ENST00000304101 ABCC1P33527 1531 aa29.28■■■□□ 2.28
KCNS3-201ENST00000304101 AFAP1Q8N556 730 aa29.28■■■□□ 2.28
KCNS3-201ENST00000304101 ADGBQ8N7X0 1667 aa29.27■■■□□ 2.28
KCNS3-201ENST00000304101 KIAA1107Q9UPP5 1409 aa29.26■■■□□ 2.28
KCNS3-201ENST00000304101 ADGRL2O95490 1459 aa29.26■■■□□ 2.27
KCNS3-201ENST00000304101 SHANK2Q9UPX8 1470 aa29.26■■■□□ 2.27
KCNS3-201ENST00000304101 PLEKHH2Q8IVE3 1493 aa29.25■■■□□ 2.27
KCNS3-201ENST00000304101 ARAP3Q8WWN8 1544 aa29.23■■■□□ 2.27
KCNS3-201ENST00000304101 FAM69CQ0P6D2 419 aa29.22■■■□□ 2.27
KCNS3-201ENST00000304101 DENND4BO75064 1496 aaPredicted RBP29.21■■■□□ 2.27
KCNS3-201ENST00000304101 KIF15Q9NS87 1388 aa29.21■■■□□ 2.27
KCNS3-201ENST00000304101 RSPH4AQ5TD94 716 aa29.21■■■□□ 2.27
KCNS3-201ENST00000304101 ADGRL1O94910 1474 aa29.21■■■□□ 2.27
KCNS3-201ENST00000304101 SCAPERQ9BY12 1400 aa29.19■■■□□ 2.26
KCNS3-201ENST00000304101 ANKRD50Q9ULJ7 1429 aa29.17■■■□□ 2.26
KCNS3-201ENST00000304101 FOXD1Q16676 465 aa29.15■■■□□ 2.26
KCNS3-201ENST00000304101 MPHOSPH9Q99550 1183 aa29.15■■■□□ 2.26
KCNS3-201ENST00000304101 MYT1LQ9UL68 1186 aa29.14■■■□□ 2.25
KCNS3-201ENST00000304101 SPAG9O60271 1321 aaKnown RBP29.12■■■□□ 2.25
KCNS3-201ENST00000304101 DIP2BQ9P265 1576 aa29.11■■■□□ 2.25
KCNS3-201ENST00000304101 DDX10Q13206 875 aaKnown RBP29.09■■■□□ 2.25
KCNS3-201ENST00000304101 MAST1Q9Y2H9 1570 aa29.09■■■□□ 2.25
KCNS3-201ENST00000304101 MAP3K4Q9Y6R4 1608 aa29.07■■■□□ 2.24
KCNS3-201ENST00000304101 RAPGEF3O95398 923 aa29.05■■■□□ 2.24
KCNS3-201ENST00000304101 HIRIP3Q9BW71 556 aaPredicted RBP29.04■■■□□ 2.24
KCNS3-201ENST00000304101 SLC4A1APQ9BWU0 796 aaKnown RBP29.04■■■□□ 2.24
KCNS3-201ENST00000304101 GLI2P10070 1586 aa29.03■■■□□ 2.24
KCNS3-201ENST00000304101 ZFYVE16Q7Z3T8 1539 aa29.03■■■□□ 2.24
KCNS3-201ENST00000304101 TSPOAP1O95153 1857 aa29.03■■■□□ 2.24
KCNS3-201ENST00000304101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.23
KCNS3-201ENST00000304101 PLXNC1O60486 1568 aa29■■■□□ 2.23
KCNS3-201ENST00000304101 NUP155O75694 1391 aa28.99■■■□□ 2.23
KCNS3-201ENST00000304101 PZPP20742 1482 aa28.99■■■□□ 2.23
KCNS3-201ENST00000304101 CFAP74Q9C0B2 1584 aa28.98■■■□□ 2.23
KCNS3-201ENST00000304101 ANKRD30BQ9BXX2 1392 aa28.97■■■□□ 2.23
KCNS3-201ENST00000304101 ATP7AQ04656 1500 aa28.97■■■□□ 2.23
KCNS3-201ENST00000304101 POGZQ7Z3K3 1410 aa28.96■■■□□ 2.23
KCNS3-201ENST00000304101 ZNF518AQ6AHZ1 1483 aa28.95■■■□□ 2.23
KCNS3-201ENST00000304101 NEO1Q92859 1461 aa28.95■■■□□ 2.23
KCNS3-201ENST00000304101 INO80Q9ULG1 1556 aaPredicted RBP28.94■■■□□ 2.22
KCNS3-201ENST00000304101 DUOX2Q9NRD8 1548 aa28.94■■■□□ 2.22
KCNS3-201ENST00000304101 RPRD2Q5VT52 1461 aaKnown RBP28.93■■■□□ 2.22
KCNS3-201ENST00000304101 RTEL1-TNFRSF6BF6WH68 1400 aa28.93■■■□□ 2.22
KCNS3-201ENST00000304101 PKD2Q13563 968 aa28.91■■■□□ 2.22
KCNS3-201ENST00000304101 KIF13AQ9H1H9 1805 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms