RNA–Protein interactions for RNA: ENST00000303622.13

MARK3-202, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MARK3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-202ENST00000303622 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
MARK3-202ENST00000303622 NPM2Q86SE8 214 aaKnown RBP20.91■□□□□ 0.94
MARK3-202ENST00000303622 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
MARK3-202ENST00000303622 DEKP35659 375 aaKnown RBP20.91■□□□□ 0.94
MARK3-202ENST00000303622 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
MARK3-202ENST00000303622 NCOA1Q15788 1441 aa20.9■□□□□ 0.94
MARK3-202ENST00000303622 SUPT6HQ7KZ85 1726 aaKnown RBP20.89■□□□□ 0.93
MARK3-202ENST00000303622 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
MARK3-202ENST00000303622 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
MARK3-202ENST00000303622 CTTNBP2Q8WZ74 1663 aa20.87■□□□□ 0.93
MARK3-202ENST00000303622 ERICH6BQ5W0A0 696 aa20.87■□□□□ 0.93
MARK3-202ENST00000303622 UGGT2Q9NYU1 1516 aa20.86■□□□□ 0.93
MARK3-202ENST00000303622 CUL7Q14999 1698 aa20.85■□□□□ 0.93
MARK3-202ENST00000303622 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
MARK3-202ENST00000303622 LRRIQ1Q96JM4 1722 aa20.85■□□□□ 0.93
MARK3-202ENST00000303622 PKD2Q13563 968 aa20.84■□□□□ 0.93
MARK3-202ENST00000303622 CFDP1Q9UEE9 299 aaPredicted RBP20.82■□□□□ 0.92
MARK3-202ENST00000303622 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
MARK3-202ENST00000303622 FBLN2P98095 1184 aa20.82■□□□□ 0.92
MARK3-202ENST00000303622 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
MARK3-202ENST00000303622 ANP32AP39687 249 aaKnown RBP20.8■□□□□ 0.92
MARK3-202ENST00000303622 CARD11Q9BXL7 1154 aa20.79■□□□□ 0.92
MARK3-202ENST00000303622 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
MARK3-202ENST00000303622 USP47Q96K76 1375 aa20.79■□□□□ 0.92
MARK3-202ENST00000303622 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
MARK3-202ENST00000303622 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
MARK3-202ENST00000303622 RPRD2Q5VT52 1461 aaKnown RBP20.75■□□□□ 0.91
MARK3-202ENST00000303622 DAPK1P53355 1430 aa20.75■□□□□ 0.91
MARK3-202ENST00000303622 ZBTB47Q9UFB7 747 aaPredicted RBP20.74■□□□□ 0.91
MARK3-202ENST00000303622 ABCC5O15440 1437 aa20.74■□□□□ 0.91
MARK3-202ENST00000303622 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
MARK3-202ENST00000303622 RTL5Q5HYW3 569 aaPredicted RBP20.72■□□□□ 0.91
MARK3-202ENST00000303622 DCAF11Q8TEB1 546 aa20.71■□□□□ 0.91
MARK3-202ENST00000303622 TCOF1Q13428 1488 aaKnown RBP20.71■□□□□ 0.91
MARK3-202ENST00000303622 EXOC6Q8TAG9 804 aa20.71■□□□□ 0.91
MARK3-202ENST00000303622 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
MARK3-202ENST00000303622 RGL3Q3MIN7 710 aa20.7■□□□□ 0.9
MARK3-202ENST00000303622 SKAP1Q86WV1 359 aa20.7■□□□□ 0.9
MARK3-202ENST00000303622 TEX14Q8IWB6 1497 aa20.7■□□□□ 0.9
MARK3-202ENST00000303622 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
MARK3-202ENST00000303622 MIA2Q96PC5 1412 aa20.69■□□□□ 0.9
MARK3-202ENST00000303622 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
MARK3-202ENST00000303622 DHX29Q7Z478 1369 aaKnown RBP20.69■□□□□ 0.9
MARK3-202ENST00000303622 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
MARK3-202ENST00000303622 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
MARK3-202ENST00000303622 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
MARK3-202ENST00000303622 IPO9Q96P70 1041 aaKnown RBP20.67■□□□□ 0.9
MARK3-202ENST00000303622 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
MARK3-202ENST00000303622 PRG4Q92954 1404 aaPredicted RBP20.67■□□□□ 0.9
MARK3-202ENST00000303622 PLIN1O60240 522 aa20.66■□□□□ 0.9
MARK3-202ENST00000303622 NUP155O75694 1391 aa20.64■□□□□ 0.89
MARK3-202ENST00000303622 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
MARK3-202ENST00000303622 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
MARK3-202ENST00000303622 CDCA7LQ96GN5 454 aa20.63■□□□□ 0.89
MARK3-202ENST00000303622 GCC2Q8IWJ2 1684 aa20.61■□□□□ 0.89
MARK3-202ENST00000303622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.891e-6■■■□□ 19.1
MARK3-202ENST00000303622 RTN4Q9NQC3 1192 aaKnown RBP20.6■□□□□ 0.89
MARK3-202ENST00000303622 IQGAP2Q13576 1575 aa20.6■□□□□ 0.89
MARK3-202ENST00000303622 RCAN3Q9UKA8 241 aa20.59■□□□□ 0.89
MARK3-202ENST00000303622 ROCK1Q13464 1354 aa20.58■□□□□ 0.89
MARK3-202ENST00000303622 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.88
MARK3-202ENST00000303622 HNRNPMP52272 730 aaKnown RBP eCLIP20.56■□□□□ 0.882e-7■■■■■ 29.2
MARK3-202ENST00000303622 PZPP20742 1482 aa20.56■□□□□ 0.88
MARK3-202ENST00000303622 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
MARK3-202ENST00000303622 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
MARK3-202ENST00000303622 KIAA1107Q9UPP5 1409 aa20.54■□□□□ 0.88
MARK3-202ENST00000303622 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
MARK3-202ENST00000303622 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
MARK3-202ENST00000303622 WDR62O43379 1518 aa20.54■□□□□ 0.88
MARK3-202ENST00000303622 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
MARK3-202ENST00000303622 NBPF1Q3BBV0 1214 aa20.52■□□□□ 0.88
MARK3-202ENST00000303622 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.88
MARK3-202ENST00000303622 NUP153P49790 1475 aaKnown RBP20.52■□□□□ 0.88
MARK3-202ENST00000303622 KIF15Q9NS87 1388 aa20.52■□□□□ 0.87
MARK3-202ENST00000303622 PDE4AP27815 886 aa20.51■□□□□ 0.87
MARK3-202ENST00000303622 ROCK2O75116 1388 aaKnown RBP20.51■□□□□ 0.87
MARK3-202ENST00000303622 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
MARK3-202ENST00000303622 ANKRD30AQ9BXX3 1397 aa20.51■□□□□ 0.87
MARK3-202ENST00000303622 ANKRD50Q9ULJ7 1429 aa20.51■□□□□ 0.87
MARK3-202ENST00000303622 NEFMP07197 916 aa20.51■□□□□ 0.87
MARK3-202ENST00000303622 BCORL1Q5H9F3 1711 aa20.5■□□□□ 0.87
MARK3-202ENST00000303622 PLB1Q6P1J6 1458 aa20.49■□□□□ 0.87
MARK3-202ENST00000303622 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
MARK3-202ENST00000303622 CAMSAP2Q08AD1 1489 aa20.48■□□□□ 0.87
MARK3-202ENST00000303622 SLC4A3P48751 1232 aa20.48■□□□□ 0.87
MARK3-202ENST00000303622 RALBP1Q15311 655 aa20.46■□□□□ 0.87
MARK3-202ENST00000303622 NLRP13Q86W25 1043 aa20.45■□□□□ 0.86
MARK3-202ENST00000303622 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
MARK3-202ENST00000303622 DNMT1P26358 1616 aaKnown RBP20.44■□□□□ 0.86
MARK3-202ENST00000303622 CRBNQ96SW2 442 aa20.44■□□□□ 0.86
MARK3-202ENST00000303622 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
MARK3-202ENST00000303622 TROQ12816 1431 aaPredicted RBP20.42■□□□□ 0.86
MARK3-202ENST00000303622 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
MARK3-202ENST00000303622 GPATCH8Q9UKJ3 1502 aaKnown RBP20.41■□□□□ 0.86
MARK3-202ENST00000303622 KTN1Q86UP2 1357 aaKnown RBP20.41■□□□□ 0.86
MARK3-202ENST00000303622 C20orf194Q5TEA3 1177 aa20.41■□□□□ 0.86
MARK3-202ENST00000303622 DISP1Q96F81 1524 aa20.41■□□□□ 0.86
MARK3-202ENST00000303622 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
MARK3-202ENST00000303622 PANK3Q9H999 370 aa20.41■□□□□ 0.86
MARK3-202ENST00000303622 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms