RNA–Protein interactions for RNA: ENST00000302904.8

UBTF-201, Transcript of upstream binding transcription factor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBTF, Length 4,997 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-201ENST00000302904 NEUROD2Q15784 382 aa19.52■□□□□ 0.71
UBTF-201ENST00000302904 NUDCQ9Y266 331 aa19.51■□□□□ 0.71
UBTF-201ENST00000302904 SAFB2Q14151 953 aaKnown RBP eCLIP19.51■□□□□ 0.71
UBTF-201ENST00000302904 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
UBTF-201ENST00000302904 TMF1P82094 1093 aa19.5■□□□□ 0.71
UBTF-201ENST00000302904 FOXD1Q16676 465 aa19.5■□□□□ 0.71
UBTF-201ENST00000302904 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
UBTF-201ENST00000302904 SRPK2P78362 688 aaKnown RBP19.49■□□□□ 0.71
UBTF-201ENST00000302904 KIF3BO15066 747 aa19.49■□□□□ 0.71
UBTF-201ENST00000302904 NUP155O75694 1391 aa19.47■□□□□ 0.71
UBTF-201ENST00000302904 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
UBTF-201ENST00000302904 AMER1Q5JTC6 1135 aaPredicted RBP19.47■□□□□ 0.71
UBTF-201ENST00000302904 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
UBTF-201ENST00000302904 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
UBTF-201ENST00000302904 STK26Q9P289 416 aa19.45■□□□□ 0.7
UBTF-201ENST00000302904 TIMELESSQ9UNS1 1208 aa19.45■□□□□ 0.7
UBTF-201ENST00000302904 CYB5RLQ6IPT4 315 aa19.44■□□□□ 0.7
UBTF-201ENST00000302904 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
UBTF-201ENST00000302904 SPAG9O60271 1321 aaKnown RBP19.43■□□□□ 0.7
UBTF-201ENST00000302904 U2SURPO15042 1029 aaKnown RBP19.43■□□□□ 0.7
UBTF-201ENST00000302904 A0A0U1RQG5 324 aaPredicted RBP19.43■□□□□ 0.7
UBTF-201ENST00000302904 SOX12O15370 315 aa19.43■□□□□ 0.7
UBTF-201ENST00000302904 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
UBTF-201ENST00000302904 MPHOSPH9Q99550 1183 aa19.41■□□□□ 0.7
UBTF-201ENST00000302904 DNTTIP2Q5QJE6 756 aaKnown RBP19.41■□□□□ 0.7
UBTF-201ENST00000302904 B4GALNT3Q6L9W6 998 aa19.41■□□□□ 0.7
UBTF-201ENST00000302904 USP35Q9P2H5 1018 aa19.41■□□□□ 0.7
UBTF-201ENST00000302904 RSPH4AQ5TD94 716 aa19.4■□□□□ 0.7
UBTF-201ENST00000302904 PTPRGP23470 1445 aa19.39■□□□□ 0.69
UBTF-201ENST00000302904 IPO9Q96P70 1041 aaKnown RBP19.38■□□□□ 0.69
UBTF-201ENST00000302904 CCDC18Q5T9S5 1454 aa19.38■□□□□ 0.69
UBTF-201ENST00000302904 UBE2Q2Q8WVN8 375 aa19.36■□□□□ 0.69
UBTF-201ENST00000302904 WASHC2CQ9Y4E1 1318 aa19.36■□□□□ 0.69
UBTF-201ENST00000302904 RAB3GAP2Q9H2M9 1393 aa19.35■□□□□ 0.69
UBTF-201ENST00000302904 GOLGA6L22H0YM25 854 aa19.35■□□□□ 0.69
UBTF-201ENST00000302904 FTSJ3Q8IY81 847 aaKnown RBP19.34■□□□□ 0.69
UBTF-201ENST00000302904 PTMAP06454 111 aaKnown RBP19.33■□□□□ 0.68
UBTF-201ENST00000302904 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
UBTF-201ENST00000302904 MORC1Q86VD1 984 aa19.32■□□□□ 0.68
UBTF-201ENST00000302904 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
UBTF-201ENST00000302904 HSPA5P11021 654 aaKnown RBP19.31■□□□□ 0.68
UBTF-201ENST00000302904 MSNP26038 577 aaKnown RBP19.31■□□□□ 0.68
UBTF-201ENST00000302904 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
UBTF-201ENST00000302904 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
UBTF-201ENST00000302904 HDGFL2Q7Z4V5 671 aaPredicted RBP19.29■□□□□ 0.68
UBTF-201ENST00000302904 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.68
UBTF-201ENST00000302904 ROCK2O75116 1388 aaKnown RBP19.27■□□□□ 0.67
UBTF-201ENST00000302904 FRAT1Q92837 279 aaPredicted RBP19.26■□□□□ 0.67
UBTF-201ENST00000302904 EID1Q9Y6B2 187 aa19.26■□□□□ 0.67
UBTF-201ENST00000302904 PAK3O75914 559 aaPredicted RBP19.26■□□□□ 0.67
UBTF-201ENST00000302904 IGF1RP08069 1367 aa19.25■□□□□ 0.67
UBTF-201ENST00000302904 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
UBTF-201ENST00000302904 NPHP1O15259 732 aa19.23■□□□□ 0.67
UBTF-201ENST00000302904 GSE1Q14687 1217 aa19.23■□□□□ 0.67
UBTF-201ENST00000302904 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
UBTF-201ENST00000302904 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.662e-7■■■■■ 30.7
UBTF-201ENST00000302904 ARID3AQ99856 593 aa19.18■□□□□ 0.66
UBTF-201ENST00000302904 TNNT3P45378 269 aaPredicted RBP19.16■□□□□ 0.66
UBTF-201ENST00000302904 IL27Q8NEV9 243 aa19.16■□□□□ 0.66
UBTF-201ENST00000302904 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
UBTF-201ENST00000302904 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
UBTF-201ENST00000302904 RTF1Q92541 710 aaKnown RBP19.14■□□□□ 0.66
UBTF-201ENST00000302904 CSB-PGBD3P0DP91 1061 aa19.14■□□□□ 0.65
UBTF-201ENST00000302904 EIF3AQ14152 1382 aaKnown RBP19.14■□□□□ 0.65
UBTF-201ENST00000302904 FAM69CQ0P6D2 419 aa19.13■□□□□ 0.65
UBTF-201ENST00000302904 MS4A1P11836 297 aa19.12■□□□□ 0.65
UBTF-201ENST00000302904 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
UBTF-201ENST00000302904 U2AF1L5P0DN76 240 aaPredicted RBP19.12■□□□□ 0.65
UBTF-201ENST00000302904 U2AF1Q01081 240 aaKnown RBP eCLIP19.12■□□□□ 0.65
UBTF-201ENST00000302904 GOLGA6L3A6NEY3 463 aa19.11■□□□□ 0.65
UBTF-201ENST00000302904 CHAF1AQ13111 956 aaPredicted RBP19.11■□□□□ 0.65
UBTF-201ENST00000302904 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
UBTF-201ENST00000302904 TERF2IPQ9NYB0 399 aa19.1■□□□□ 0.65
UBTF-201ENST00000302904 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
UBTF-201ENST00000302904 OS9Q13438 667 aaPredicted RBP19.1■□□□□ 0.65
UBTF-201ENST00000302904 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
UBTF-201ENST00000302904 CASC1Q6TDU7 716 aa19.08■□□□□ 0.64
UBTF-201ENST00000302904 TCERG1O14776 1098 aaKnown RBP19.08■□□□□ 0.64
UBTF-201ENST00000302904 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
UBTF-201ENST00000302904 RGS3P49796 1198 aa19.06■□□□□ 0.64
UBTF-201ENST00000302904 NESP48681 1621 aa19.04■□□□□ 0.64
UBTF-201ENST00000302904 RALBP1Q15311 655 aa19.03■□□□□ 0.64
UBTF-201ENST00000302904 VGFO15240 615 aaPredicted RBP19.03■□□□□ 0.64
UBTF-201ENST00000302904 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
UBTF-201ENST00000302904 CFTRP13569 1480 aa19.02■□□□□ 0.63
UBTF-201ENST00000302904 CCDC9Q9Y3X0 531 aaKnown RBP19.01■□□□□ 0.63
UBTF-201ENST00000302904 ZNF644Q9H582 1327 aaPredicted RBP18.99■□□□□ 0.63
UBTF-201ENST00000302904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.98■□□□□ 0.63
UBTF-201ENST00000302904 GZF1Q9H116 711 aaPredicted RBP18.98■□□□□ 0.63
UBTF-201ENST00000302904 GOLGA2Q08379 1002 aa18.98■□□□□ 0.63
UBTF-201ENST00000302904 ST20-MTHFSA0A0A6YYL1 179 aa18.98■□□□□ 0.63
UBTF-201ENST00000302904 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
UBTF-201ENST00000302904 ZNF330Q9Y3S2 320 aaPredicted RBP18.97■□□□□ 0.63
UBTF-201ENST00000302904 MYOM3Q5VTT5 1437 aa18.97■□□□□ 0.63
UBTF-201ENST00000302904 PTMSP20962 102 aa18.96■□□□□ 0.63
UBTF-201ENST00000302904 UACAQ9BZF9 1416 aa18.96■□□□□ 0.63
UBTF-201ENST00000302904 AMPHP49418 695 aa18.96■□□□□ 0.63
UBTF-201ENST00000302904 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
UBTF-201ENST00000302904 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
UBTF-201ENST00000302904 RRP9O43818 475 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms