RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 CASC1Q6TDU7 716 aa24.91■■□□□ 1.58
TSR1-201ENST00000301364 TNNT2P45379 298 aaPredicted RBP24.9■■□□□ 1.58
TSR1-201ENST00000301364 POGKQ9P215 609 aa24.9■■□□□ 1.58
TSR1-201ENST00000301364 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.58
TSR1-201ENST00000301364 DEKP35659 375 aaKnown RBP24.86■■□□□ 1.57
TSR1-201ENST00000301364 PDE3BQ13370 1112 aa24.84■■□□□ 1.57
TSR1-201ENST00000301364 U2SURPO15042 1029 aaKnown RBP24.84■■□□□ 1.57
TSR1-201ENST00000301364 MORC1Q86VD1 984 aa24.84■■□□□ 1.57
TSR1-201ENST00000301364 NLRP13Q86W25 1043 aa24.83■■□□□ 1.57
TSR1-201ENST00000301364 RSPH4AQ5TD94 716 aa24.81■■□□□ 1.56
TSR1-201ENST00000301364 KIF21BO75037 1637 aa24.78■■□□□ 1.56
TSR1-201ENST00000301364 PRKRIP1Q9H875 184 aaPredicted RBP24.77■■□□□ 1.56
TSR1-201ENST00000301364 IGF1RP08069 1367 aa24.76■■□□□ 1.55
TSR1-201ENST00000301364 EFCAB2Q5VUJ9 269 aa24.75■■□□□ 1.55
TSR1-201ENST00000301364 ARID4BQ4LE39 1312 aaPredicted RBP24.75■■□□□ 1.55
TSR1-201ENST00000301364 C14orf37Q86TY3 774 aa24.73■■□□□ 1.55
TSR1-201ENST00000301364 KIF15Q9NS87 1388 aa24.73■■□□□ 1.55
TSR1-201ENST00000301364 HSP90AB1P08238 724 aaKnown RBP24.73■■□□□ 1.55
TSR1-201ENST00000301364 PHLDB1Q86UU1 1377 aa24.73■■□□□ 1.55
TSR1-201ENST00000301364 IPO9Q96P70 1041 aaKnown RBP24.72■■□□□ 1.55
TSR1-201ENST00000301364 ZBED9Q6R2W3 1325 aa24.71■■□□□ 1.55
TSR1-201ENST00000301364 HSCBQ8IWL3 235 aa24.71■■□□□ 1.55
TSR1-201ENST00000301364 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
TSR1-201ENST00000301364 EIF3AQ14152 1382 aaKnown RBP24.69■■□□□ 1.54
TSR1-201ENST00000301364 SRPK2P78362 688 aaKnown RBP24.69■■□□□ 1.54
TSR1-201ENST00000301364 MYBBP1AQ9BQG0 1328 aaKnown RBP24.68■■□□□ 1.54
TSR1-201ENST00000301364 GOLGA2Q08379 1002 aa24.67■■□□□ 1.54
TSR1-201ENST00000301364 L1TD1Q5T7N2 865 aaKnown RBP24.67■■□□□ 1.54
TSR1-201ENST00000301364 RTN4Q9NQC3 1192 aaKnown RBP24.67■■□□□ 1.54
TSR1-201ENST00000301364 HAP1P54257 671 aaPredicted RBP24.66■■□□□ 1.54
TSR1-201ENST00000301364 HNRNPMP52272 730 aaKnown RBP eCLIP24.66■■□□□ 1.54
TSR1-201ENST00000301364 CFAP44Q96MT7 982 aa24.66■■□□□ 1.54
TSR1-201ENST00000301364 IPO8O15397 1037 aaKnown RBP24.65■■□□□ 1.54
TSR1-201ENST00000301364 PTMAP06454 111 aaKnown RBP24.65■■□□□ 1.54
TSR1-201ENST00000301364 ZBTB7CA1YPR0 619 aa24.64■■□□□ 1.54
TSR1-201ENST00000301364 RWDD1Q9H446 243 aaPredicted RBP24.64■■□□□ 1.53
TSR1-201ENST00000301364 ST20-MTHFSA0A0A6YYL1 179 aa24.63■■□□□ 1.53
TSR1-201ENST00000301364 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
TSR1-201ENST00000301364 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
TSR1-201ENST00000301364 LRRC9Q6ZRR7 1453 aa24.61■■□□□ 1.53
TSR1-201ENST00000301364 UACAQ9BZF9 1416 aa24.61■■□□□ 1.53
TSR1-201ENST00000301364 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
TSR1-201ENST00000301364 U2AF1L5P0DN76 240 aaPredicted RBP24.59■■□□□ 1.53
TSR1-201ENST00000301364 U2AF1Q01081 240 aaKnown RBP eCLIP24.59■■□□□ 1.53
TSR1-201ENST00000301364 PMFBP1Q8TBY8 1022 aa24.59■■□□□ 1.53
TSR1-201ENST00000301364 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
TSR1-201ENST00000301364 GGT6Q6P531 493 aa24.58■■□□□ 1.53
TSR1-201ENST00000301364 USP47Q96K76 1375 aa24.58■■□□□ 1.53
TSR1-201ENST00000301364 RRBP1Q9P2E9 1410 aaKnown RBP24.58■■□□□ 1.52
TSR1-201ENST00000301364 HDGFL2Q7Z4V5 671 aaPredicted RBP24.57■■□□□ 1.52
TSR1-201ENST00000301364 HDGFP51858 240 aaKnown RBP24.57■■□□□ 1.52
TSR1-201ENST00000301364 MYOM3Q5VTT5 1437 aa24.57■■□□□ 1.52
TSR1-201ENST00000301364 NAP1L5Q96NT1 182 aaPredicted RBP24.56■■□□□ 1.52
TSR1-201ENST00000301364 CCDC144AA2RUR9 1427 aa24.56■■□□□ 1.52
TSR1-201ENST00000301364 CALD1Q05682 793 aaKnown RBP24.55■■□□□ 1.52
TSR1-201ENST00000301364 CUX1P39880 1505 aa24.55■■□□□ 1.52
TSR1-201ENST00000301364 SAFB2Q14151 953 aaKnown RBP eCLIP24.54■■□□□ 1.52
TSR1-201ENST00000301364 FANCIQ9NVI1 1328 aa24.54■■□□□ 1.52
TSR1-201ENST00000301364 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
TSR1-201ENST00000301364 KIF3BO15066 747 aa24.5■■□□□ 1.51
TSR1-201ENST00000301364 DNTTIP2Q5QJE6 756 aaKnown RBP24.5■■□□□ 1.51
TSR1-201ENST00000301364 SPAG9O60271 1321 aaKnown RBP24.5■■□□□ 1.51
TSR1-201ENST00000301364 PANK3Q9H999 370 aa24.49■■□□□ 1.51
TSR1-201ENST00000301364 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
TSR1-201ENST00000301364 CENPJQ9HC77 1338 aaPredicted RBP24.49■■□□□ 1.51
TSR1-201ENST00000301364 RRP1P56182 461 aaKnown RBP24.49■■□□□ 1.51
TSR1-201ENST00000301364 CASKIN1Q8WXD9 1431 aa24.49■■□□□ 1.51
TSR1-201ENST00000301364 ZRSR1Q15695 479 aaKnown RBP24.48■■□□□ 1.51
TSR1-201ENST00000301364 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
TSR1-201ENST00000301364 PLEKHG5O94827 1062 aa24.48■■□□□ 1.51
TSR1-201ENST00000301364 STK26Q9P289 416 aa24.47■■□□□ 1.51
TSR1-201ENST00000301364 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
TSR1-201ENST00000301364 PTMSP20962 102 aa24.47■■□□□ 1.51
TSR1-201ENST00000301364 ITPRIPQ8IWB1 547 aa24.47■■□□□ 1.51
TSR1-201ENST00000301364 USP35Q9P2H5 1018 aa24.47■■□□□ 1.51
TSR1-201ENST00000301364 MCCP23508 829 aa24.46■■□□□ 1.51
TSR1-201ENST00000301364 CENPQQ7L2Z9 268 aaPredicted RBP24.45■■□□□ 1.51
TSR1-201ENST00000301364 SPRYD3Q8NCJ5 442 aa24.45■■□□□ 1.51
TSR1-201ENST00000301364 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
TSR1-201ENST00000301364 GBP4Q96PP9 640 aa24.45■■□□□ 1.5
TSR1-201ENST00000301364 OS9Q13438 667 aaPredicted RBP24.44■■□□□ 1.5
TSR1-201ENST00000301364 CCDC146Q8IYE0 955 aa24.44■■□□□ 1.5
TSR1-201ENST00000301364 PDE4AP27815 886 aa24.43■■□□□ 1.5
TSR1-201ENST00000301364 SLKQ9H2G2 1235 aaPredicted RBP24.43■■□□□ 1.5
TSR1-201ENST00000301364 CNTLNQ9NXG0 1405 aa24.43■■□□□ 1.5
TSR1-201ENST00000301364 TERF2IPQ9NYB0 399 aa24.41■■□□□ 1.5
TSR1-201ENST00000301364 SMC4Q9NTJ3 1288 aa24.41■■□□□ 1.5
TSR1-201ENST00000301364 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
TSR1-201ENST00000301364 KIF7Q2M1P5 1343 aa24.41■■□□□ 1.5
TSR1-201ENST00000301364 RAD54L2Q9Y4B4 1467 aa24.41■■□□□ 1.5
TSR1-201ENST00000301364 EXOC6Q8TAG9 804 aa24.41■■□□□ 1.5
TSR1-201ENST00000301364 RTF1Q92541 710 aaKnown RBP24.4■■□□□ 1.5
TSR1-201ENST00000301364 FYCO1Q9BQS8 1478 aa24.39■■□□□ 1.5
TSR1-201ENST00000301364 KCNJ4P48050 445 aa24.38■■□□□ 1.49
TSR1-201ENST00000301364 NCOA2Q15596 1464 aa24.37■■□□□ 1.49
TSR1-201ENST00000301364 TPRNQ4KMQ1 711 aa24.37■■□□□ 1.49
TSR1-201ENST00000301364 FAM161AQ3B820 660 aa24.36■■□□□ 1.49
TSR1-201ENST00000301364 E9PSI1 815 aa24.36■■□□□ 1.49
TSR1-201ENST00000301364 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
TSR1-201ENST00000301364 MSNP26038 577 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms