RNA–Protein interactions for RNA: ENST00000301072.10

TUBA1C-201, Transcript of tubulin alpha 1c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1C, Length 3,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-201ENST00000301072 PRG4Q92954 1404 aaPredicted RBP23.82■■□□□ 1.4
TUBA1C-201ENST00000301072 DNMT1P26358 1616 aaKnown RBP23.8■■□□□ 1.4
TUBA1C-201ENST00000301072 SIN3AQ96ST3 1273 aa23.8■■□□□ 1.4
TUBA1C-201ENST00000301072 TIMELESSQ9UNS1 1208 aa23.79■■□□□ 1.4
TUBA1C-201ENST00000301072 ITSN2Q9NZM3 1697 aa23.78■■□□□ 1.4
TUBA1C-201ENST00000301072 KIF14Q15058 1648 aa23.78■■□□□ 1.4
TUBA1C-201ENST00000301072 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
TUBA1C-201ENST00000301072 DAPK1P53355 1430 aa23.76■■□□□ 1.39
TUBA1C-201ENST00000301072 KDM6BO15054 1643 aa23.75■■□□□ 1.39
TUBA1C-201ENST00000301072 ATP10BO94823 1461 aa23.73■■□□□ 1.39
TUBA1C-201ENST00000301072 ABCC5O15440 1437 aa23.73■■□□□ 1.39
TUBA1C-201ENST00000301072 ROCK1Q13464 1354 aa23.73■■□□□ 1.39
TUBA1C-201ENST00000301072 GPATCH8Q9UKJ3 1502 aaKnown RBP23.73■■□□□ 1.39
TUBA1C-201ENST00000301072 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
TUBA1C-201ENST00000301072 CHIC2Q9UKJ5 165 aa23.72■■□□□ 1.39
TUBA1C-201ENST00000301072 PKNOX2Q96KN3 472 aa23.72■■□□□ 1.39
TUBA1C-201ENST00000301072 NCBP3Q53F19 620 aaKnown RBP23.7■■□□□ 1.38
TUBA1C-201ENST00000301072 KLHL34Q8N239 644 aa23.7■■□□□ 1.38
TUBA1C-201ENST00000301072 ZNF644Q9H582 1327 aaPredicted RBP23.69■■□□□ 1.38
TUBA1C-201ENST00000301072 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
TUBA1C-201ENST00000301072 DENND4BO75064 1496 aaPredicted RBP23.69■■□□□ 1.38
TUBA1C-201ENST00000301072 MIER1Q8N108 512 aa23.67■■□□□ 1.38
TUBA1C-201ENST00000301072 PTPRGP23470 1445 aa23.66■■□□□ 1.38
TUBA1C-201ENST00000301072 ABCC10Q5T3U5 1492 aa23.66■■□□□ 1.38
TUBA1C-201ENST00000301072 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
TUBA1C-201ENST00000301072 CROCC2H7BZ55 1655 aa23.64■■□□□ 1.38
TUBA1C-201ENST00000301072 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
TUBA1C-201ENST00000301072 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
TUBA1C-201ENST00000301072 ADGBQ8N7X0 1667 aa23.62■■□□□ 1.37
TUBA1C-201ENST00000301072 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
TUBA1C-201ENST00000301072 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
TUBA1C-201ENST00000301072 KDM5BQ9UGL1 1544 aa23.58■■□□□ 1.36
TUBA1C-201ENST00000301072 ADGRL2O95490 1459 aa23.57■■□□□ 1.36
TUBA1C-201ENST00000301072 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
TUBA1C-201ENST00000301072 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
TUBA1C-201ENST00000301072 CCDC136Q96JN2 1154 aa23.57■■□□□ 1.36
TUBA1C-201ENST00000301072 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
TUBA1C-201ENST00000301072 NCOA1Q15788 1441 aa23.54■■□□□ 1.36
TUBA1C-201ENST00000301072 MPHOSPH9Q99550 1183 aa23.52■■□□□ 1.36
TUBA1C-201ENST00000301072 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
TUBA1C-201ENST00000301072 PLPPR3Q6T4P5 718 aa23.51■■□□□ 1.35
TUBA1C-201ENST00000301072 ABCC2Q92887 1545 aa23.5■■□□□ 1.35
TUBA1C-201ENST00000301072 SHANK2Q9UPX8 1470 aa23.49■■□□□ 1.35
TUBA1C-201ENST00000301072 PREX2Q70Z35 1606 aa23.48■■□□□ 1.35
TUBA1C-201ENST00000301072 ZNF777Q9ULD5 760 aaPredicted RBP23.47■■□□□ 1.35
TUBA1C-201ENST00000301072 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
TUBA1C-201ENST00000301072 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
TUBA1C-201ENST00000301072 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.34
TUBA1C-201ENST00000301072 ANKRD30AQ9BXX3 1397 aa23.42■■□□□ 1.34
TUBA1C-201ENST00000301072 PZPP20742 1482 aa23.42■■□□□ 1.34
TUBA1C-201ENST00000301072 ANKRD30BQ9BXX2 1392 aa23.42■■□□□ 1.34
TUBA1C-201ENST00000301072 SAMD9LQ8IVG5 1584 aa23.42■■□□□ 1.34
TUBA1C-201ENST00000301072 MBD5Q9P267 1494 aa23.41■■□□□ 1.34
TUBA1C-201ENST00000301072 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
TUBA1C-201ENST00000301072 C9orf84Q5VXU9 1444 aa23.39■■□□□ 1.34
TUBA1C-201ENST00000301072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.39■■□□□ 1.337e-7■■■■□ 23.3
TUBA1C-201ENST00000301072 UHRF1BP1LA0JNW5 1464 aa23.39■■□□□ 1.33
TUBA1C-201ENST00000301072 RPRD2Q5VT52 1461 aaKnown RBP23.38■■□□□ 1.33
TUBA1C-201ENST00000301072 FOXD1Q16676 465 aa23.36■■□□□ 1.33
TUBA1C-201ENST00000301072 ZCCHC11Q5TAX3 1644 aaKnown RBP23.35■■□□□ 1.33
TUBA1C-201ENST00000301072 ANKRD50Q9ULJ7 1429 aa23.35■■□□□ 1.33
TUBA1C-201ENST00000301072 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
TUBA1C-201ENST00000301072 YTHDC1Q96MU7 727 aaKnown RBP23.33■■□□□ 1.33
TUBA1C-201ENST00000301072 MYO5CQ9NQX4 1742 aa23.33■■□□□ 1.32
TUBA1C-201ENST00000301072 CCDC141Q6ZP82 1450 aa23.32■■□□□ 1.32
TUBA1C-201ENST00000301072 TEX14Q8IWB6 1497 aa23.31■■□□□ 1.32
TUBA1C-201ENST00000301072 KDM5DQ9BY66 1539 aa23.3■■□□□ 1.32
TUBA1C-201ENST00000301072 HNRNPMP52272 730 aaKnown RBP eCLIP23.3■■□□□ 1.32
TUBA1C-201ENST00000301072 RTN4Q9NQC3 1192 aaKnown RBP23.28■■□□□ 1.32
TUBA1C-201ENST00000301072 MAST1Q9Y2H9 1570 aa23.28■■□□□ 1.32
TUBA1C-201ENST00000301072 ARHGAP5Q13017 1502 aa23.28■■□□□ 1.32
TUBA1C-201ENST00000301072 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
TUBA1C-201ENST00000301072 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
TUBA1C-201ENST00000301072 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
TUBA1C-201ENST00000301072 HIRIP3Q9BW71 556 aaPredicted RBP23.27■■□□□ 1.32
TUBA1C-201ENST00000301072 SYCP2Q9BX26 1530 aa23.27■■□□□ 1.32
TUBA1C-201ENST00000301072 L3MBTL2Q969R5 705 aa23.27■■□□□ 1.32
TUBA1C-201ENST00000301072 RSPH4AQ5TD94 716 aa23.26■■□□□ 1.31
TUBA1C-201ENST00000301072 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
TUBA1C-201ENST00000301072 KIF15Q9NS87 1388 aa23.25■■□□□ 1.31
TUBA1C-201ENST00000301072 PDIA4P13667 645 aaKnown RBP23.22■■□□□ 1.31
TUBA1C-201ENST00000301072 PLEKHH2Q8IVE3 1493 aa23.21■■□□□ 1.31
TUBA1C-201ENST00000301072 PLCH2O75038 1416 aa23.2■■□□□ 1.3
TUBA1C-201ENST00000301072 PLXNC1O60486 1568 aa23.19■■□□□ 1.3
TUBA1C-201ENST00000301072 PDE4CQ08493 712 aa23.18■■□□□ 1.3
TUBA1C-201ENST00000301072 NUP155O75694 1391 aa23.18■■□□□ 1.3
TUBA1C-201ENST00000301072 PKD2Q13563 968 aa23.17■■□□□ 1.3
TUBA1C-201ENST00000301072 ARXQ96QS3 562 aa23.17■■□□□ 1.3
TUBA1C-201ENST00000301072 ARHGEF12Q9NZN5 1544 aa23.16■■□□□ 1.3
TUBA1C-201ENST00000301072 KCNH8Q96L42 1107 aa23.14■■□□□ 1.29
TUBA1C-201ENST00000301072 UNC13BO14795 1591 aa23.13■■□□□ 1.29
TUBA1C-201ENST00000301072 NBPF8Q3BBV2 869 aa23.13■■□□□ 1.29
TUBA1C-201ENST00000301072 ARAP3Q8WWN8 1544 aa23.13■■□□□ 1.29
TUBA1C-201ENST00000301072 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
TUBA1C-201ENST00000301072 ABCC1P33527 1531 aa23.12■■□□□ 1.29
TUBA1C-201ENST00000301072 FAM135AQ9P2D6 1515 aa23.1■■□□□ 1.29
TUBA1C-201ENST00000301072 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.29
TUBA1C-201ENST00000301072 NEFLP07196 543 aa23.08■■□□□ 1.29
TUBA1C-201ENST00000301072 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
TUBA1C-201ENST00000301072 SPATA31E1Q6ZUB1 1445 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms