RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
PGAP3-201ENST00000300658 YTHDC1Q96MU7 727 aaKnown RBP23.8■■□□□ 1.4
PGAP3-201ENST00000300658 GCC2Q8IWJ2 1684 aa23.8■■□□□ 1.4
PGAP3-201ENST00000300658 ATP10BO94823 1461 aa23.8■■□□□ 1.4
PGAP3-201ENST00000300658 GPATCH8Q9UKJ3 1502 aaKnown RBP23.79■■□□□ 1.4
PGAP3-201ENST00000300658 TRIM52Q96A61 297 aa23.79■■□□□ 1.4
PGAP3-201ENST00000300658 CFDP1Q9UEE9 299 aaPredicted RBP23.78■■□□□ 1.4
PGAP3-201ENST00000300658 CHD1O14646 1710 aa23.77■■□□□ 1.4
PGAP3-201ENST00000300658 DNMT1P26358 1616 aaKnown RBP23.75■■□□□ 1.39
PGAP3-201ENST00000300658 PTPRGP23470 1445 aa23.74■■□□□ 1.39
PGAP3-201ENST00000300658 ZNF777Q9ULD5 760 aaPredicted RBP23.74■■□□□ 1.39
PGAP3-201ENST00000300658 PLEKHD1A6NEE1 506 aa23.74■■□□□ 1.39
PGAP3-201ENST00000300658 ROCK1Q13464 1354 aa23.73■■□□□ 1.39
PGAP3-201ENST00000300658 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
PGAP3-201ENST00000300658 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
PGAP3-201ENST00000300658 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
PGAP3-201ENST00000300658 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
PGAP3-201ENST00000300658 ADCY10Q96PN6 1610 aa23.71■■□□□ 1.39
PGAP3-201ENST00000300658 FOXD1Q16676 465 aa23.71■■□□□ 1.39
PGAP3-201ENST00000300658 ABCC10Q5T3U5 1492 aa23.66■■□□□ 1.38
PGAP3-201ENST00000300658 KDM5BQ9UGL1 1544 aa23.66■■□□□ 1.38
PGAP3-201ENST00000300658 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
PGAP3-201ENST00000300658 ITSN2Q9NZM3 1697 aa23.64■■□□□ 1.37
PGAP3-201ENST00000300658 NCOA1Q15788 1441 aa23.62■■□□□ 1.37
PGAP3-201ENST00000300658 CDC42BPAQ5VT25 1732 aa23.61■■□□□ 1.37
PGAP3-201ENST00000300658 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
PGAP3-201ENST00000300658 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
PGAP3-201ENST00000300658 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
PGAP3-201ENST00000300658 SLC4A1APQ9BWU0 796 aaKnown RBP23.54■■□□□ 1.36
PGAP3-201ENST00000300658 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
PGAP3-201ENST00000300658 HNRNPMP52272 730 aaKnown RBP eCLIP23.53■■□□□ 1.36
PGAP3-201ENST00000300658 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
PGAP3-201ENST00000300658 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
PGAP3-201ENST00000300658 PZPP20742 1482 aa23.5■■□□□ 1.35
PGAP3-201ENST00000300658 KCNH8Q96L42 1107 aa23.5■■□□□ 1.35
PGAP3-201ENST00000300658 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
PGAP3-201ENST00000300658 ADGBQ8N7X0 1667 aa23.48■■□□□ 1.35
PGAP3-201ENST00000300658 C9orf84Q5VXU9 1444 aa23.46■■□□□ 1.35
PGAP3-201ENST00000300658 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
PGAP3-201ENST00000300658 MBD5Q9P267 1494 aa23.45■■□□□ 1.34
PGAP3-201ENST00000300658 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
PGAP3-201ENST00000300658 RPRD2Q5VT52 1461 aaKnown RBP23.43■■□□□ 1.34
PGAP3-201ENST00000300658 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
PGAP3-201ENST00000300658 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
PGAP3-201ENST00000300658 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
PGAP3-201ENST00000300658 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
PGAP3-201ENST00000300658 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
PGAP3-201ENST00000300658 NBPF8Q3BBV2 869 aa23.4■■□□□ 1.34
PGAP3-201ENST00000300658 SHANK2Q9UPX8 1470 aa23.4■■□□□ 1.34
PGAP3-201ENST00000300658 PKD2Q13563 968 aa23.39■■□□□ 1.33
PGAP3-201ENST00000300658 TTC37Q6PGP7 1564 aa23.39■■□□□ 1.33
PGAP3-201ENST00000300658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.39■■□□□ 1.33
PGAP3-201ENST00000300658 HSPA5P11021 654 aaKnown RBP23.38■■□□□ 1.33
PGAP3-201ENST00000300658 PREX2Q70Z35 1606 aa23.37■■□□□ 1.33
PGAP3-201ENST00000300658 TEX14Q8IWB6 1497 aa23.37■■□□□ 1.33
PGAP3-201ENST00000300658 ANP32EQ9BTT0 268 aa23.37■■□□□ 1.33
PGAP3-201ENST00000300658 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
PGAP3-201ENST00000300658 KIF15Q9NS87 1388 aa23.35■■□□□ 1.33
PGAP3-201ENST00000300658 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
PGAP3-201ENST00000300658 NUP155O75694 1391 aa23.34■■□□□ 1.33
PGAP3-201ENST00000300658 CCDC141Q6ZP82 1450 aa23.32■■□□□ 1.32
PGAP3-201ENST00000300658 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
PGAP3-201ENST00000300658 SYCP2Q9BX26 1530 aa23.3■■□□□ 1.32
PGAP3-201ENST00000300658 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.327e-9■■■■□ 20.6
PGAP3-201ENST00000300658 WASHC2AQ641Q2 1341 aa23.29■■□□□ 1.32
PGAP3-201ENST00000300658 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
PGAP3-201ENST00000300658 ERICH6Q7L0X2 663 aa23.27■■□□□ 1.32
PGAP3-201ENST00000300658 UHRF1BP1LA0JNW5 1464 aa23.27■■□□□ 1.32
PGAP3-201ENST00000300658 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.32
PGAP3-201ENST00000300658 RSPH4AQ5TD94 716 aa23.27■■□□□ 1.32
PGAP3-201ENST00000300658 ARHGEF12Q9NZN5 1544 aa23.25■■□□□ 1.31
PGAP3-201ENST00000300658 ANP32CO43423 234 aa23.23■■□□□ 1.31
PGAP3-201ENST00000300658 MYO5CQ9NQX4 1742 aa23.22■■□□□ 1.31
PGAP3-201ENST00000300658 KDM5DQ9BY66 1539 aa23.21■■□□□ 1.31
PGAP3-201ENST00000300658 PLCH2O75038 1416 aa23.21■■□□□ 1.31
PGAP3-201ENST00000300658 SPATA31E1Q6ZUB1 1445 aa23.18■■□□□ 1.3
PGAP3-201ENST00000300658 ZNF326Q5BKZ1 582 aaKnown RBP23.16■■□□□ 1.3
PGAP3-201ENST00000300658 EFCAB2Q5VUJ9 269 aa23.16■■□□□ 1.3
PGAP3-201ENST00000300658 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
PGAP3-201ENST00000300658 MAST1Q9Y2H9 1570 aa23.15■■□□□ 1.3
PGAP3-201ENST00000300658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.29
PGAP3-201ENST00000300658 FAM135AQ9P2D6 1515 aa23.13■■□□□ 1.29
PGAP3-201ENST00000300658 PLEKHH2Q8IVE3 1493 aa23.13■■□□□ 1.29
PGAP3-201ENST00000300658 TRAPPC8Q9Y2L5 1435 aa23.13■■□□□ 1.29
PGAP3-201ENST00000300658 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
PGAP3-201ENST00000300658 AFAP1Q8N556 730 aa23.08■■□□□ 1.29
PGAP3-201ENST00000300658 TSHZ2Q9NRE2 1034 aa23.08■■□□□ 1.29
PGAP3-201ENST00000300658 KDM2AQ9Y2K7 1162 aa23.07■■□□□ 1.28
PGAP3-201ENST00000300658 ABCC1P33527 1531 aa23.07■■□□□ 1.28
PGAP3-201ENST00000300658 PLXNC1O60486 1568 aa23.06■■□□□ 1.28
PGAP3-201ENST00000300658 KIF7Q2M1P5 1343 aa23.06■■□□□ 1.28
PGAP3-201ENST00000300658 PLA2R1Q13018 1463 aa23.05■■□□□ 1.28
PGAP3-201ENST00000300658 WDR7Q9Y4E6 1490 aa23.05■■□□□ 1.28
PGAP3-201ENST00000300658 UHRF1BP1Q6BDS2 1440 aa23.04■■□□□ 1.28
PGAP3-201ENST00000300658 UNC13BO14795 1591 aa23.04■■□□□ 1.28
PGAP3-201ENST00000300658 DCAF11Q8TEB1 546 aa23.03■■□□□ 1.28
PGAP3-201ENST00000300658 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
PGAP3-201ENST00000300658 USP47Q96K76 1375 aa23.02■■□□□ 1.28
PGAP3-201ENST00000300658 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
PGAP3-201ENST00000300658 DUOX2Q9NRD8 1548 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms