RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 KDM6BO15054 1643 aa19.54■□□□□ 0.72
KDM1B-201ENST00000297792 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
KDM1B-201ENST00000297792 KDM2AQ9Y2K7 1162 aa19.53■□□□□ 0.72
KDM1B-201ENST00000297792 SAMD9Q5K651 1589 aa19.51■□□□□ 0.71
KDM1B-201ENST00000297792 SUPT6HQ7KZ85 1726 aaKnown RBP19.5■□□□□ 0.71
KDM1B-201ENST00000297792 FANCIQ9NVI1 1328 aa19.5■□□□□ 0.71
KDM1B-201ENST00000297792 CCDC7Q96M83 1385 aa19.5■□□□□ 0.71
KDM1B-201ENST00000297792 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
KDM1B-201ENST00000297792 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
KDM1B-201ENST00000297792 KIF7Q2M1P5 1343 aa19.49■□□□□ 0.71
KDM1B-201ENST00000297792 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
KDM1B-201ENST00000297792 EHBP1L1Q8N3D4 1523 aa19.47■□□□□ 0.71
KDM1B-201ENST00000297792 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
KDM1B-201ENST00000297792 UGGT2Q9NYU1 1516 aa19.47■□□□□ 0.71
KDM1B-201ENST00000297792 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
KDM1B-201ENST00000297792 AKNAQ7Z591 1439 aa19.44■□□□□ 0.7
KDM1B-201ENST00000297792 DEKP35659 375 aaKnown RBP19.44■□□□□ 0.7
KDM1B-201ENST00000297792 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
KDM1B-201ENST00000297792 ZBED9Q6R2W3 1325 aa19.44■□□□□ 0.7
KDM1B-201ENST00000297792 CFDP1Q9UEE9 299 aaPredicted RBP19.43■□□□□ 0.7
KDM1B-201ENST00000297792 NOP58Q9Y2X3 529 aaKnown RBP19.42■□□□□ 0.7
KDM1B-201ENST00000297792 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
KDM1B-201ENST00000297792 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
KDM1B-201ENST00000297792 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
KDM1B-201ENST00000297792 IQGAP2Q13576 1575 aa19.41■□□□□ 0.7
KDM1B-201ENST00000297792 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
KDM1B-201ENST00000297792 PRG4Q92954 1404 aaPredicted RBP19.39■□□□□ 0.7
KDM1B-201ENST00000297792 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
KDM1B-201ENST00000297792 PKD2Q13563 968 aa19.36■□□□□ 0.69
KDM1B-201ENST00000297792 HECW1Q76N89 1606 aa19.35■□□□□ 0.69
KDM1B-201ENST00000297792 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
KDM1B-201ENST00000297792 ERICH6BQ5W0A0 696 aa19.34■□□□□ 0.69
KDM1B-201ENST00000297792 ABCC5O15440 1437 aa19.34■□□□□ 0.69
KDM1B-201ENST00000297792 NUDCQ9Y266 331 aa19.33■□□□□ 0.69
KDM1B-201ENST00000297792 ZBTB47Q9UFB7 747 aaPredicted RBP19.33■□□□□ 0.68
KDM1B-201ENST00000297792 DAPK1P53355 1430 aa19.33■□□□□ 0.68
KDM1B-201ENST00000297792 ARHGEF11O15085 1522 aa19.32■□□□□ 0.68
KDM1B-201ENST00000297792 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
KDM1B-201ENST00000297792 NCOA1Q15788 1441 aa19.31■□□□□ 0.68
KDM1B-201ENST00000297792 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
KDM1B-201ENST00000297792 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
KDM1B-201ENST00000297792 WDR62O43379 1518 aa19.3■□□□□ 0.68
KDM1B-201ENST00000297792 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
KDM1B-201ENST00000297792 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
KDM1B-201ENST00000297792 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
KDM1B-201ENST00000297792 NUP153P49790 1475 aaKnown RBP19.29■□□□□ 0.68
KDM1B-201ENST00000297792 TCOF1Q13428 1488 aaKnown RBP19.29■□□□□ 0.68
KDM1B-201ENST00000297792 USP47Q96K76 1375 aa19.29■□□□□ 0.68
KDM1B-201ENST00000297792 LAS1LQ9Y4W2 734 aaKnown RBP19.29■□□□□ 0.68
KDM1B-201ENST00000297792 DCAF11Q8TEB1 546 aa19.27■□□□□ 0.67
KDM1B-201ENST00000297792 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
KDM1B-201ENST00000297792 JPH4Q96JJ6 628 aa19.26■□□□□ 0.67
KDM1B-201ENST00000297792 DISP1Q96F81 1524 aa19.26■□□□□ 0.67
KDM1B-201ENST00000297792 HNRNPMP52272 730 aaKnown RBP eCLIP19.25■□□□□ 0.67
KDM1B-201ENST00000297792 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
KDM1B-201ENST00000297792 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
KDM1B-201ENST00000297792 EXOC6Q8TAG9 804 aa19.23■□□□□ 0.67
KDM1B-201ENST00000297792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.67
KDM1B-201ENST00000297792 RTN4Q9NQC3 1192 aaKnown RBP19.22■□□□□ 0.67
KDM1B-201ENST00000297792 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
KDM1B-201ENST00000297792 SKAP1Q86WV1 359 aa19.21■□□□□ 0.67
KDM1B-201ENST00000297792 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
KDM1B-201ENST00000297792 PLEKHD1A6NEE1 506 aa19.2■□□□□ 0.66
KDM1B-201ENST00000297792 PLIN1O60240 522 aa19.2■□□□□ 0.66
KDM1B-201ENST00000297792 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
KDM1B-201ENST00000297792 GCC2Q8IWJ2 1684 aa19.19■□□□□ 0.66
KDM1B-201ENST00000297792 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
KDM1B-201ENST00000297792 RPRD2Q5VT52 1461 aaKnown RBP19.19■□□□□ 0.66
KDM1B-201ENST00000297792 NUP155O75694 1391 aa19.18■□□□□ 0.66
KDM1B-201ENST00000297792 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
KDM1B-201ENST00000297792 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
KDM1B-201ENST00000297792 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
KDM1B-201ENST00000297792 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
KDM1B-201ENST00000297792 TEX14Q8IWB6 1497 aa19.15■□□□□ 0.66
KDM1B-201ENST00000297792 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.66
KDM1B-201ENST00000297792 TSPY4P0CV99 314 aa19.14■□□□□ 0.65
KDM1B-201ENST00000297792 TSPY10P0CW01 314 aa19.14■□□□□ 0.65
KDM1B-201ENST00000297792 CDCA7LQ96GN5 454 aa19.14■□□□□ 0.65
KDM1B-201ENST00000297792 TROQ12816 1431 aaPredicted RBP19.14■□□□□ 0.65
KDM1B-201ENST00000297792 SMG6Q86US8 1419 aaKnown RBP19.14■□□□□ 0.65
KDM1B-201ENST00000297792 KIF14Q15058 1648 aa19.13■□□□□ 0.65
KDM1B-201ENST00000297792 GPATCH8Q9UKJ3 1502 aaKnown RBP19.12■□□□□ 0.65
KDM1B-201ENST00000297792 PZPP20742 1482 aa19.12■□□□□ 0.65
KDM1B-201ENST00000297792 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
KDM1B-201ENST00000297792 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
KDM1B-201ENST00000297792 RAPGEF6Q8TEU7 1601 aa19.12■□□□□ 0.65
KDM1B-201ENST00000297792 RRP1P56182 461 aaKnown RBP19.11■□□□□ 0.65
KDM1B-201ENST00000297792 NEFMP07197 916 aa19.1■□□□□ 0.65
KDM1B-201ENST00000297792 DHX29Q7Z478 1369 aaKnown RBP19.1■□□□□ 0.65
KDM1B-201ENST00000297792 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
KDM1B-201ENST00000297792 ANKRD50Q9ULJ7 1429 aa19.09■□□□□ 0.65
KDM1B-201ENST00000297792 DNMT1P26358 1616 aaKnown RBP19.09■□□□□ 0.65
KDM1B-201ENST00000297792 ANKRD30AQ9BXX3 1397 aa19.09■□□□□ 0.65
KDM1B-201ENST00000297792 ROCK2O75116 1388 aaKnown RBP19.07■□□□□ 0.64
KDM1B-201ENST00000297792 SPATA31E1Q6ZUB1 1445 aa19.07■□□□□ 0.64
KDM1B-201ENST00000297792 DAXXQ9UER7 740 aaPredicted RBP19.06■□□□□ 0.64
KDM1B-201ENST00000297792 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
KDM1B-201ENST00000297792 KIAA1107Q9UPP5 1409 aa19.05■□□□□ 0.64
KDM1B-201ENST00000297792 SLC4A3P48751 1232 aa19.05■□□□□ 0.64
KDM1B-201ENST00000297792 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms