RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
TTC39B-201ENST00000297615 NEFLP07196 543 aa18.87■□□□□ 0.61
TTC39B-201ENST00000297615 PTPN23Q9H3S7 1636 aa18.86■□□□□ 0.61
TTC39B-201ENST00000297615 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
TTC39B-201ENST00000297615 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
TTC39B-201ENST00000297615 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
TTC39B-201ENST00000297615 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
TTC39B-201ENST00000297615 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
TTC39B-201ENST00000297615 SAMD9Q5K651 1589 aa18.84■□□□□ 0.61
TTC39B-201ENST00000297615 DISP1Q96F81 1524 aa18.84■□□□□ 0.61
TTC39B-201ENST00000297615 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
TTC39B-201ENST00000297615 NUP153P49790 1475 aaKnown RBP18.83■□□□□ 0.61
TTC39B-201ENST00000297615 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
TTC39B-201ENST00000297615 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
TTC39B-201ENST00000297615 KIAA0586Q9BVV6 1533 aa18.82■□□□□ 0.6
TTC39B-201ENST00000297615 EHBP1L1Q8N3D4 1523 aa18.8■□□□□ 0.6
TTC39B-201ENST00000297615 TSHZ2Q9NRE2 1034 aa18.8■□□□□ 0.6
TTC39B-201ENST00000297615 TIMELESSQ9UNS1 1208 aa18.8■□□□□ 0.6
TTC39B-201ENST00000297615 ABCC5O15440 1437 aa18.79■□□□□ 0.6
TTC39B-201ENST00000297615 UGGT2Q9NYU1 1516 aa18.79■□□□□ 0.6
TTC39B-201ENST00000297615 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
TTC39B-201ENST00000297615 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
TTC39B-201ENST00000297615 NUP155O75694 1391 aa18.77■□□□□ 0.6
TTC39B-201ENST00000297615 DAPK1P53355 1430 aa18.75■□□□□ 0.59
TTC39B-201ENST00000297615 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
TTC39B-201ENST00000297615 HECW1Q76N89 1606 aa18.74■□□□□ 0.59
TTC39B-201ENST00000297615 PTPRGP23470 1445 aa18.73■□□□□ 0.59
TTC39B-201ENST00000297615 CARMIL2Q6F5E8 1435 aa18.73■□□□□ 0.59
TTC39B-201ENST00000297615 ARHGEF11O15085 1522 aa18.73■□□□□ 0.59
TTC39B-201ENST00000297615 WDR62O43379 1518 aa18.73■□□□□ 0.59
TTC39B-201ENST00000297615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.72■□□□□ 0.59
TTC39B-201ENST00000297615 DENND4BO75064 1496 aaPredicted RBP18.72■□□□□ 0.59
TTC39B-201ENST00000297615 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
TTC39B-201ENST00000297615 CARD11Q9BXL7 1154 aa18.68■□□□□ 0.58
TTC39B-201ENST00000297615 SYNJ2O15056 1496 aa18.68■□□□□ 0.58
TTC39B-201ENST00000297615 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
TTC39B-201ENST00000297615 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
TTC39B-201ENST00000297615 TROQ12816 1431 aaPredicted RBP18.67■□□□□ 0.58
TTC39B-201ENST00000297615 KIF14Q15058 1648 aa18.65■□□□□ 0.58
TTC39B-201ENST00000297615 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.58
TTC39B-201ENST00000297615 ANKRD30BQ9BXX2 1392 aa18.64■□□□□ 0.58
TTC39B-201ENST00000297615 KIF7Q2M1P5 1343 aa18.64■□□□□ 0.57
TTC39B-201ENST00000297615 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
TTC39B-201ENST00000297615 ST20-MTHFSA0A0A6YYL1 179 aa18.63■□□□□ 0.57
TTC39B-201ENST00000297615 ATP10BO94823 1461 aa18.63■□□□□ 0.57
TTC39B-201ENST00000297615 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
TTC39B-201ENST00000297615 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
TTC39B-201ENST00000297615 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
TTC39B-201ENST00000297615 RAPGEF6Q8TEU7 1601 aa18.61■□□□□ 0.57
TTC39B-201ENST00000297615 NCOA1Q15788 1441 aa18.61■□□□□ 0.57
TTC39B-201ENST00000297615 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
TTC39B-201ENST00000297615 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
TTC39B-201ENST00000297615 PRKRIP1Q9H875 184 aaPredicted RBP18.58■□□□□ 0.56
TTC39B-201ENST00000297615 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
TTC39B-201ENST00000297615 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
TTC39B-201ENST00000297615 CHGAP10645 457 aaKnown RBP18.55■□□□□ 0.56
TTC39B-201ENST00000297615 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
TTC39B-201ENST00000297615 CCDC7Q96M83 1385 aa18.54■□□□□ 0.56
TTC39B-201ENST00000297615 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
TTC39B-201ENST00000297615 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
TTC39B-201ENST00000297615 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
TTC39B-201ENST00000297615 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
TTC39B-201ENST00000297615 USP47Q96K76 1375 aa18.51■□□□□ 0.55
TTC39B-201ENST00000297615 NUTM2DQ5VT03 806 aaPredicted RBP18.51■□□□□ 0.55
TTC39B-201ENST00000297615 KDM5BQ9UGL1 1544 aa18.49■□□□□ 0.55
TTC39B-201ENST00000297615 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
TTC39B-201ENST00000297615 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
TTC39B-201ENST00000297615 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
TTC39B-201ENST00000297615 NUP160Q12769 1436 aa18.48■□□□□ 0.55
TTC39B-201ENST00000297615 PZPP20742 1482 aa18.47■□□□□ 0.55
TTC39B-201ENST00000297615 RPRD2Q5VT52 1461 aaKnown RBP18.44■□□□□ 0.54
TTC39B-201ENST00000297615 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
TTC39B-201ENST00000297615 KIAA1107Q9UPP5 1409 aa18.43■□□□□ 0.54
TTC39B-201ENST00000297615 KIF3BO15066 747 aa18.43■□□□□ 0.54
TTC39B-201ENST00000297615 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
TTC39B-201ENST00000297615 CNTLNQ9NXG0 1405 aa18.41■□□□□ 0.54
TTC39B-201ENST00000297615 ARHGAP5Q13017 1502 aa18.4■□□□□ 0.54
TTC39B-201ENST00000297615 GGT6Q6P531 493 aa18.4■□□□□ 0.54
TTC39B-201ENST00000297615 EFCAB2Q5VUJ9 269 aa18.39■□□□□ 0.54
TTC39B-201ENST00000297615 DNMT1P26358 1616 aaKnown RBP18.39■□□□□ 0.53
TTC39B-201ENST00000297615 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
TTC39B-201ENST00000297615 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
TTC39B-201ENST00000297615 SPAG9O60271 1321 aaKnown RBP18.35■□□□□ 0.53
TTC39B-201ENST00000297615 GCC2Q8IWJ2 1684 aa18.35■□□□□ 0.53
TTC39B-201ENST00000297615 MYT1Q01538 1121 aa18.34■□□□□ 0.53
TTC39B-201ENST00000297615 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
TTC39B-201ENST00000297615 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
TTC39B-201ENST00000297615 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
TTC39B-201ENST00000297615 SYCP2Q9BX26 1530 aa18.32■□□□□ 0.52
TTC39B-201ENST00000297615 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
TTC39B-201ENST00000297615 ABCC10Q5T3U5 1492 aa18.31■□□□□ 0.52
TTC39B-201ENST00000297615 PANK3Q9H999 370 aa18.31■□□□□ 0.52
TTC39B-201ENST00000297615 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
TTC39B-201ENST00000297615 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
TTC39B-201ENST00000297615 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
TTC39B-201ENST00000297615 ABCA8O94911 1581 aa18.27■□□□□ 0.52
TTC39B-201ENST00000297615 MBD5Q9P267 1494 aa18.27■□□□□ 0.52
TTC39B-201ENST00000297615 RAPGEF3O95398 923 aa18.26■□□□□ 0.51
TTC39B-201ENST00000297615 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
TTC39B-201ENST00000297615 CHD1O14646 1710 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms