RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 NAIPQ13075 1403 aa20.9■□□□□ 0.94
GDF9-201ENST00000296875 GCC2Q8IWJ2 1684 aa20.89■□□□□ 0.94
GDF9-201ENST00000296875 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
GDF9-201ENST00000296875 KIF14Q15058 1648 aa20.85■□□□□ 0.93
GDF9-201ENST00000296875 PTPRKQ15262 1439 aa20.84■□□□□ 0.93
GDF9-201ENST00000296875 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
GDF9-201ENST00000296875 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
GDF9-201ENST00000296875 ROCK1Q13464 1354 aa20.81■□□□□ 0.92
GDF9-201ENST00000296875 ITSN2Q9NZM3 1697 aa20.79■□□□□ 0.92
GDF9-201ENST00000296875 ABCC10Q5T3U5 1492 aa20.78■□□□□ 0.92
GDF9-201ENST00000296875 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
GDF9-201ENST00000296875 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
GDF9-201ENST00000296875 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.92
GDF9-201ENST00000296875 DNMT1P26358 1616 aaKnown RBP20.75■□□□□ 0.91
GDF9-201ENST00000296875 CDC42BPAQ5VT25 1732 aa20.74■□□□□ 0.91
GDF9-201ENST00000296875 DAPK1P53355 1430 aa20.73■□□□□ 0.91
GDF9-201ENST00000296875 GPATCH8Q9UKJ3 1502 aaKnown RBP20.72■□□□□ 0.91
GDF9-201ENST00000296875 YTHDC1Q96MU7 727 aaKnown RBP20.72■□□□□ 0.91
GDF9-201ENST00000296875 WDR7Q9Y4E6 1490 aa20.71■□□□□ 0.91
GDF9-201ENST00000296875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
GDF9-201ENST00000296875 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
GDF9-201ENST00000296875 ASXL2Q76L83 1435 aa20.7■□□□□ 0.9
GDF9-201ENST00000296875 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
GDF9-201ENST00000296875 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
GDF9-201ENST00000296875 RRP7BPQ9NSQ0 103 aa20.68■□□□□ 0.9
GDF9-201ENST00000296875 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
GDF9-201ENST00000296875 CDC42BPBQ9Y5S2 1711 aa20.66■□□□□ 0.9
GDF9-201ENST00000296875 CHIC2Q9UKJ5 165 aa20.65■□□□□ 0.9
GDF9-201ENST00000296875 PREX2Q70Z35 1606 aa20.64■□□□□ 0.9
GDF9-201ENST00000296875 ABCC5O15440 1437 aa20.64■□□□□ 0.9
GDF9-201ENST00000296875 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
GDF9-201ENST00000296875 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
GDF9-201ENST00000296875 CFDP1Q9UEE9 299 aaPredicted RBP20.63■□□□□ 0.89
GDF9-201ENST00000296875 ADGBQ8N7X0 1667 aa20.63■□□□□ 0.89
GDF9-201ENST00000296875 MYO5CQ9NQX4 1742 aa20.62■□□□□ 0.89
GDF9-201ENST00000296875 CAMSAP2Q08AD1 1489 aa20.62■□□□□ 0.89
GDF9-201ENST00000296875 ABCA9Q8IUA7 1624 aa20.61■□□□□ 0.89
GDF9-201ENST00000296875 MPHOSPH9Q99550 1183 aa20.59■□□□□ 0.89
GDF9-201ENST00000296875 ADGRL2O95490 1459 aa20.59■□□□□ 0.89
GDF9-201ENST00000296875 ZNF644Q9H582 1327 aaPredicted RBP20.58■□□□□ 0.89
GDF9-201ENST00000296875 CROCC2H7BZ55 1655 aa20.56■□□□□ 0.88
GDF9-201ENST00000296875 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
GDF9-201ENST00000296875 PLCH2O75038 1416 aa20.55■□□□□ 0.88
GDF9-201ENST00000296875 SHANK2Q9UPX8 1470 aa20.55■□□□□ 0.88
GDF9-201ENST00000296875 SAMD9LQ8IVG5 1584 aa20.54■□□□□ 0.88
GDF9-201ENST00000296875 ARAP3Q8WWN8 1544 aa20.54■□□□□ 0.88
GDF9-201ENST00000296875 KDM6BO15054 1643 aa20.53■□□□□ 0.88
GDF9-201ENST00000296875 NCOA1Q15788 1441 aa20.51■□□□□ 0.87
GDF9-201ENST00000296875 ANP32CO43423 234 aa20.51■□□□□ 0.87
GDF9-201ENST00000296875 ARHGAP5Q13017 1502 aa20.5■□□□□ 0.87
GDF9-201ENST00000296875 CCER2I3L3R5 266 aa20.5■□□□□ 0.87
GDF9-201ENST00000296875 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
GDF9-201ENST00000296875 DENND4BO75064 1496 aaPredicted RBP20.49■□□□□ 0.87
GDF9-201ENST00000296875 RPRD2Q5VT52 1461 aaKnown RBP20.49■□□□□ 0.87
GDF9-201ENST00000296875 GLI2P10070 1586 aa20.47■□□□□ 0.87
GDF9-201ENST00000296875 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
GDF9-201ENST00000296875 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
GDF9-201ENST00000296875 MBD5Q9P267 1494 aa20.47■□□□□ 0.87
GDF9-201ENST00000296875 ANKRD30BQ9BXX2 1392 aa20.47■□□□□ 0.87
GDF9-201ENST00000296875 RSPH4AQ5TD94 716 aa20.46■□□□□ 0.87
GDF9-201ENST00000296875 ARHGEF5Q12774 1597 aa20.46■□□□□ 0.87
GDF9-201ENST00000296875 DIP2BQ9P265 1576 aa20.46■□□□□ 0.87
GDF9-201ENST00000296875 MAP3K4Q9Y6R4 1608 aa20.45■□□□□ 0.86
GDF9-201ENST00000296875 EIF4G2P78344 907 aaKnown RBP eCLIP20.44■□□□□ 0.86
GDF9-201ENST00000296875 KIAA1107Q9UPP5 1409 aa20.43■□□□□ 0.86
GDF9-201ENST00000296875 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
GDF9-201ENST00000296875 TSPY4P0CV99 314 aa20.43■□□□□ 0.86
GDF9-201ENST00000296875 TSPY10P0CW01 314 aa20.43■□□□□ 0.86
GDF9-201ENST00000296875 ABCC1P33527 1531 aa20.42■□□□□ 0.86
GDF9-201ENST00000296875 SYCP2Q9BX26 1530 aa20.42■□□□□ 0.86
GDF9-201ENST00000296875 EFCAB2Q5VUJ9 269 aa20.42■□□□□ 0.86
GDF9-201ENST00000296875 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
GDF9-201ENST00000296875 PLEKHH2Q8IVE3 1493 aa20.41■□□□□ 0.86
GDF9-201ENST00000296875 C9orf84Q5VXU9 1444 aa20.41■□□□□ 0.86
GDF9-201ENST00000296875 ANKRD50Q9ULJ7 1429 aa20.41■□□□□ 0.86
GDF9-201ENST00000296875 KIF13AQ9H1H9 1805 aa20.4■□□□□ 0.86
GDF9-201ENST00000296875 FANCAO15360 1455 aa20.4■□□□□ 0.86
GDF9-201ENST00000296875 HNRNPMP52272 730 aaKnown RBP eCLIP20.4■□□□□ 0.86
GDF9-201ENST00000296875 PZPP20742 1482 aa20.38■□□□□ 0.85
GDF9-201ENST00000296875 CCDC141Q6ZP82 1450 aa20.37■□□□□ 0.85
GDF9-201ENST00000296875 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
GDF9-201ENST00000296875 TEX14Q8IWB6 1497 aa20.36■□□□□ 0.85
GDF9-201ENST00000296875 KDM5DQ9BY66 1539 aa20.36■□□□□ 0.85
GDF9-201ENST00000296875 PPRC1Q5VV67 1664 aaKnown RBP20.35■□□□□ 0.85
GDF9-201ENST00000296875 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
GDF9-201ENST00000296875 TRAPPC8Q9Y2L5 1435 aa20.34■□□□□ 0.85
GDF9-201ENST00000296875 MAST1Q9Y2H9 1570 aa20.33■□□□□ 0.85
GDF9-201ENST00000296875 FAM69CQ0P6D2 419 aa20.33■□□□□ 0.84
GDF9-201ENST00000296875 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
GDF9-201ENST00000296875 ADGRL1O94910 1474 aa20.3■□□□□ 0.84
GDF9-201ENST00000296875 NEO1Q92859 1461 aa20.3■□□□□ 0.84
GDF9-201ENST00000296875 HIRIP3Q9BW71 556 aaPredicted RBP20.3■□□□□ 0.84
GDF9-201ENST00000296875 TSPOAP1O95153 1857 aa20.3■□□□□ 0.84
GDF9-201ENST00000296875 KIF15Q9NS87 1388 aa20.29■□□□□ 0.84
GDF9-201ENST00000296875 SCAPERQ9BY12 1400 aa20.28■□□□□ 0.84
GDF9-201ENST00000296875 FOXD1Q16676 465 aa20.27■□□□□ 0.84
GDF9-201ENST00000296875 NUP155O75694 1391 aa20.26■□□□□ 0.83
GDF9-201ENST00000296875 PKD2Q13563 968 aa20.26■□□□□ 0.83
GDF9-201ENST00000296875 PLXNC1O60486 1568 aa20.24■□□□□ 0.83
GDF9-201ENST00000296875 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms