RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 SUPT6HQ7KZ85 1726 aaKnown RBP8.85□□□□□ -0.99
VCAM1-201ENST00000294728 EHBP1L1Q8N3D4 1523 aa8.85□□□□□ -0.99
VCAM1-201ENST00000294728 PTPN23Q9H3S7 1636 aa8.84□□□□□ -0.99
VCAM1-201ENST00000294728 CCER2I3L3R5 266 aa8.84□□□□□ -0.99
VCAM1-201ENST00000294728 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -0.99
VCAM1-201ENST00000294728 FGD6Q6ZV73 1430 aa8.84□□□□□ -0.99
VCAM1-201ENST00000294728 HECW1Q76N89 1606 aa8.84□□□□□ -0.99
VCAM1-201ENST00000294728 CCDC18Q5T9S5 1454 aa8.83□□□□□ -1
VCAM1-201ENST00000294728 ABCA8O94911 1581 aa8.82□□□□□ -1
VCAM1-201ENST00000294728 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
VCAM1-201ENST00000294728 ADAMTSL3P82987 1691 aa8.82□□□□□ -1
VCAM1-201ENST00000294728 ARAP3Q8WWN8 1544 aa8.82□□□□□ -1
VCAM1-201ENST00000294728 FBXO41Q8TF61 875 aa8.81□□□□□ -1
VCAM1-201ENST00000294728 PPP1R15AO75807 674 aaPredicted RBP8.8□□□□□ -1
VCAM1-201ENST00000294728 YTHDC1Q96MU7 727 aaKnown RBP8.8□□□□□ -1
VCAM1-201ENST00000294728 POLR1AO95602 1720 aaPredicted RBP8.8□□□□□ -1
VCAM1-201ENST00000294728 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
VCAM1-201ENST00000294728 CD109Q6YHK3 1445 aa8.79□□□□□ -1
VCAM1-201ENST00000294728 FHOD3Q2V2M9 1422 aa8.77□□□□□ -1
VCAM1-201ENST00000294728 NAIPQ13075 1403 aa8.76□□□□□ -1.01
VCAM1-201ENST00000294728 MIA2Q96PC5 1412 aa8.76□□□□□ -1.01
VCAM1-201ENST00000294728 ABCA9Q8IUA7 1624 aa8.76□□□□□ -1.01
VCAM1-201ENST00000294728 NCOA2Q15596 1464 aa8.76□□□□□ -1.01
VCAM1-201ENST00000294728 BCORL1Q5H9F3 1711 aa8.76□□□□□ -1.01
VCAM1-201ENST00000294728 PTPRMP28827 1452 aa8.76□□□□□ -1.01
VCAM1-201ENST00000294728 FRMPD1Q5SYB0 1578 aa8.74□□□□□ -1.01
VCAM1-201ENST00000294728 RANGAP1P46060 587 aaPredicted RBP8.73□□□□□ -1.01
VCAM1-201ENST00000294728 NEO1Q92859 1461 aa8.72□□□□□ -1.01
VCAM1-201ENST00000294728 LMTK3Q96Q04 1460 aa8.72□□□□□ -1.01
VCAM1-201ENST00000294728 PTPRKQ15262 1439 aa8.72□□□□□ -1.01
VCAM1-201ENST00000294728 MADDQ8WXG6 1647 aa8.71□□□□□ -1.01
VCAM1-201ENST00000294728 ROCK1Q13464 1354 aa8.71□□□□□ -1.02
VCAM1-201ENST00000294728 ERICH6BQ5W0A0 696 aa8.71□□□□□ -1.02
VCAM1-201ENST00000294728 MTUS2Q5JR59 1369 aa8.7□□□□□ -1.02
VCAM1-201ENST00000294728 ARHGEF40Q8TER5 1519 aa8.7□□□□□ -1.02
VCAM1-201ENST00000294728 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
VCAM1-201ENST00000294728 DNMT1P26358 1616 aaKnown RBP8.69□□□□□ -1.02
VCAM1-201ENST00000294728 TONSLQ96HA7 1378 aa8.69□□□□□ -1.02
VCAM1-201ENST00000294728 ATP10BO94823 1461 aa8.69□□□□□ -1.02
VCAM1-201ENST00000294728 DENND4BO75064 1496 aaPredicted RBP8.68□□□□□ -1.02
VCAM1-201ENST00000294728 RICTORQ6R327 1708 aa8.68□□□□□ -1.02
VCAM1-201ENST00000294728 FAM50AQ14320 339 aaKnown RBP8.67□□□□□ -1.02
VCAM1-201ENST00000294728 RIMS1Q86UR5 1692 aaKnown RBP8.67□□□□□ -1.02
VCAM1-201ENST00000294728 ADGBQ8N7X0 1667 aa8.67□□□□□ -1.02
VCAM1-201ENST00000294728 ZMYM4Q5VZL5 1548 aa8.67□□□□□ -1.02
VCAM1-201ENST00000294728 ANP32CO43423 234 aa8.67□□□□□ -1.02
VCAM1-201ENST00000294728 CFAP74Q9C0B2 1584 aa8.66□□□□□ -1.02
VCAM1-201ENST00000294728 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
VCAM1-201ENST00000294728 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.02
VCAM1-201ENST00000294728 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.02
VCAM1-201ENST00000294728 KCNH8Q96L42 1107 aa8.65□□□□□ -1.02
VCAM1-201ENST00000294728 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.03
VCAM1-201ENST00000294728 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
VCAM1-201ENST00000294728 TTC37Q6PGP7 1564 aa8.64□□□□□ -1.03
VCAM1-201ENST00000294728 SIGLEC1Q9BZZ2 1709 aa8.63□□□□□ -1.03
VCAM1-201ENST00000294728 ITGAEP38570 1179 aa8.63□□□□□ -1.03
VCAM1-201ENST00000294728 DDX10Q13206 875 aaKnown RBP8.63□□□□□ -1.03
VCAM1-201ENST00000294728 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
VCAM1-201ENST00000294728 CNTLNQ9NXG0 1405 aa8.63□□□□□ -1.03
VCAM1-201ENST00000294728 ADGRL2O95490 1459 aa8.62□□□□□ -1.03
VCAM1-201ENST00000294728 ANP32EQ9BTT0 268 aa8.62□□□□□ -1.03
VCAM1-201ENST00000294728 FANCAO15360 1455 aa8.61□□□□□ -1.03
VCAM1-201ENST00000294728 MAGI2Q86UL8 1455 aa8.61□□□□□ -1.03
VCAM1-201ENST00000294728 SPATA31E1Q6ZUB1 1445 aa8.61□□□□□ -1.03
VCAM1-201ENST00000294728 MBD5Q9P267 1494 aa8.61□□□□□ -1.03
VCAM1-201ENST00000294728 FER1L4A9Z1Z3 1794 aa8.6□□□□□ -1.03
VCAM1-201ENST00000294728 PREX1Q8TCU6 1659 aa8.6□□□□□ -1.03
VCAM1-201ENST00000294728 NEFLP07196 543 aa8.6□□□□□ -1.03
VCAM1-201ENST00000294728 NUP153P49790 1475 aaKnown RBP8.6□□□□□ -1.03
VCAM1-201ENST00000294728 ZFYVE16Q7Z3T8 1539 aa8.6□□□□□ -1.03
VCAM1-201ENST00000294728 DAPK1P53355 1430 aa8.6□□□□□ -1.03
VCAM1-201ENST00000294728 RAPGEF3O95398 923 aa8.6□□□□□ -1.03
VCAM1-201ENST00000294728 ANKRD30BQ9BXX2 1392 aa8.59□□□□□ -1.03
VCAM1-201ENST00000294728 POGZQ7Z3K3 1410 aa8.59□□□□□ -1.03
VCAM1-201ENST00000294728 KDM5DQ9BY66 1539 aa8.59□□□□□ -1.03
VCAM1-201ENST00000294728 ARHGEF12Q9NZN5 1544 aa8.59□□□□□ -1.03
VCAM1-201ENST00000294728 ARID4BQ4LE39 1312 aaPredicted RBP8.59□□□□□ -1.03
VCAM1-201ENST00000294728 KIF14Q15058 1648 aa8.59□□□□□ -1.04
VCAM1-201ENST00000294728 CERKQ8TCT0 537 aa8.58□□□□□ -1.04
VCAM1-201ENST00000294728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.58□□□□□ -1.04
VCAM1-201ENST00000294728 SHANK2Q9UPX8 1470 aa8.57□□□□□ -1.04
VCAM1-201ENST00000294728 STRCQ7RTU9 1775 aa8.56□□□□□ -1.04
VCAM1-201ENST00000294728 ABCC5O15440 1437 aa8.56□□□□□ -1.04
VCAM1-201ENST00000294728 FKBP8Q14318 412 aa8.56□□□□□ -1.04
VCAM1-201ENST00000294728 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
VCAM1-201ENST00000294728 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
VCAM1-201ENST00000294728 CCDC7Q96M83 1385 aa8.55□□□□□ -1.04
VCAM1-201ENST00000294728 WASHC2AQ641Q2 1341 aa8.55□□□□□ -1.04
VCAM1-201ENST00000294728 UHRF1BP1Q6BDS2 1440 aa8.55□□□□□ -1.04
VCAM1-201ENST00000294728 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
VCAM1-201ENST00000294728 CDK13Q14004 1512 aaKnown RBP8.55□□□□□ -1.04
VCAM1-201ENST00000294728 YEATS2Q9ULM3 1422 aa8.54□□□□□ -1.04
VCAM1-201ENST00000294728 IQSEC2Q5JU85 1478 aa8.54□□□□□ -1.04
VCAM1-201ENST00000294728 REREQ9P2R6 1566 aa8.54□□□□□ -1.04
VCAM1-201ENST00000294728 PZPP20742 1482 aa8.54□□□□□ -1.04
VCAM1-201ENST00000294728 MPHOSPH9Q99550 1183 aa8.54□□□□□ -1.04
VCAM1-201ENST00000294728 SOCS7O14512 581 aa8.53□□□□□ -1.04
VCAM1-201ENST00000294728 KDM5CP41229 1560 aa8.53□□□□□ -1.04
VCAM1-201ENST00000294728 SPATA31D1Q6ZQQ2 1576 aa8.53□□□□□ -1.04
VCAM1-201ENST00000294728 ZBED9Q6R2W3 1325 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms