RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 DAPK1P53355 1430 aa22.31■■□□□ 1.16
NCKIPSD-201ENST00000294129 GCC2Q8IWJ2 1684 aa22.31■■□□□ 1.16
NCKIPSD-201ENST00000294129 DENND4BO75064 1496 aaPredicted RBP22.3■■□□□ 1.16
NCKIPSD-201ENST00000294129 ABCC5O15440 1437 aa22.29■■□□□ 1.16
NCKIPSD-201ENST00000294129 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
NCKIPSD-201ENST00000294129 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
NCKIPSD-201ENST00000294129 CARMIL2Q6F5E8 1435 aa22.25■■□□□ 1.15
NCKIPSD-201ENST00000294129 TROQ12816 1431 aaPredicted RBP22.24■■□□□ 1.15
NCKIPSD-201ENST00000294129 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
NCKIPSD-201ENST00000294129 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
NCKIPSD-201ENST00000294129 SUPT16HQ9Y5B9 1047 aaKnown RBP22.23■■□□□ 1.15
NCKIPSD-201ENST00000294129 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
NCKIPSD-201ENST00000294129 KIF14Q15058 1648 aa22.21■■□□□ 1.15
NCKIPSD-201ENST00000294129 DNMT1P26358 1616 aaKnown RBP22.19■■□□□ 1.14
NCKIPSD-201ENST00000294129 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
NCKIPSD-201ENST00000294129 CAMSAP2Q08AD1 1489 aa22.19■■□□□ 1.14
NCKIPSD-201ENST00000294129 NUP160Q12769 1436 aa22.17■■□□□ 1.14
NCKIPSD-201ENST00000294129 ROCK1Q13464 1354 aa22.17■■□□□ 1.14
NCKIPSD-201ENST00000294129 EIF4G2P78344 907 aaKnown RBP eCLIP22.16■■□□□ 1.14
NCKIPSD-201ENST00000294129 GPATCH8Q9UKJ3 1502 aaKnown RBP22.16■■□□□ 1.14
NCKIPSD-201ENST00000294129 ZNF326Q5BKZ1 582 aaKnown RBP22.14■■□□□ 1.14
NCKIPSD-201ENST00000294129 BCANQ96GW7 911 aa22.14■■□□□ 1.13
NCKIPSD-201ENST00000294129 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.13
NCKIPSD-201ENST00000294129 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
NCKIPSD-201ENST00000294129 NBPF8Q3BBV2 869 aa22.12■■□□□ 1.13
NCKIPSD-201ENST00000294129 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
NCKIPSD-201ENST00000294129 NCOA1Q15788 1441 aa22.09■■□□□ 1.13
NCKIPSD-201ENST00000294129 MYT1Q01538 1121 aa22.08■■□□□ 1.12
NCKIPSD-201ENST00000294129 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
NCKIPSD-201ENST00000294129 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
NCKIPSD-201ENST00000294129 ATP10BO94823 1461 aa22.07■■□□□ 1.12
NCKIPSD-201ENST00000294129 PKD2Q13563 968 aa22.07■■□□□ 1.12
NCKIPSD-201ENST00000294129 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
NCKIPSD-201ENST00000294129 HNRNPMP52272 730 aaKnown RBP eCLIP22.06■■□□□ 1.129e-7■■■□□ 18.8
NCKIPSD-201ENST00000294129 RPRD2Q5VT52 1461 aaKnown RBP22.05■■□□□ 1.12
NCKIPSD-201ENST00000294129 POLR3GLQ9BT43 218 aa22.05■■□□□ 1.12
NCKIPSD-201ENST00000294129 PTPRGP23470 1445 aa22.04■■□□□ 1.12
NCKIPSD-201ENST00000294129 ANKRD30AQ9BXX3 1397 aa22.04■■□□□ 1.12
NCKIPSD-201ENST00000294129 FKBP8Q14318 412 aa22.03■■□□□ 1.12
NCKIPSD-201ENST00000294129 PZPP20742 1482 aa22.02■■□□□ 1.12
NCKIPSD-201ENST00000294129 TSPY4P0CV99 314 aa22.02■■□□□ 1.11
NCKIPSD-201ENST00000294129 TSPY10P0CW01 314 aa22.02■■□□□ 1.11
NCKIPSD-201ENST00000294129 ABCA8O94911 1581 aa22.01■■□□□ 1.11
NCKIPSD-201ENST00000294129 ANKRD50Q9ULJ7 1429 aa22■■□□□ 1.11
NCKIPSD-201ENST00000294129 HNRNPUQ00839 825 aaKnown RBP eCLIP21.99■■□□□ 1.11
NCKIPSD-201ENST00000294129 TEX14Q8IWB6 1497 aa21.98■■□□□ 1.11
NCKIPSD-201ENST00000294129 ADCY10Q96PN6 1610 aa21.98■■□□□ 1.11
NCKIPSD-201ENST00000294129 NUP155O75694 1391 aa21.98■■□□□ 1.11
NCKIPSD-201ENST00000294129 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
NCKIPSD-201ENST00000294129 ADGBQ8N7X0 1667 aa21.96■■□□□ 1.11
NCKIPSD-201ENST00000294129 C9orf84Q5VXU9 1444 aa21.96■■□□□ 1.11
NCKIPSD-201ENST00000294129 ABCC10Q5T3U5 1492 aa21.94■■□□□ 1.1
NCKIPSD-201ENST00000294129 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
NCKIPSD-201ENST00000294129 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
NCKIPSD-201ENST00000294129 CCDC7Q96M83 1385 aa21.93■■□□□ 1.1
NCKIPSD-201ENST00000294129 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
NCKIPSD-201ENST00000294129 CROCC2H7BZ55 1655 aa21.92■■□□□ 1.1
NCKIPSD-201ENST00000294129 NEFLP07196 543 aa21.92■■□□□ 1.1
NCKIPSD-201ENST00000294129 ADGRL2O95490 1459 aa21.91■■□□□ 1.1
NCKIPSD-201ENST00000294129 CNTLNQ9NXG0 1405 aa21.9■■□□□ 1.1
NCKIPSD-201ENST00000294129 CHD1O14646 1710 aa21.9■■□□□ 1.1
NCKIPSD-201ENST00000294129 KIF15Q9NS87 1388 aa21.9■■□□□ 1.1
NCKIPSD-201ENST00000294129 KIF7Q2M1P5 1343 aa21.89■■□□□ 1.1
NCKIPSD-201ENST00000294129 FAM9BQ8IZU0 186 aa21.89■■□□□ 1.09
NCKIPSD-201ENST00000294129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.87■■□□□ 1.093e-6■■□□□ 13.5
NCKIPSD-201ENST00000294129 PRKRIP1Q9H875 184 aaPredicted RBP21.84■■□□□ 1.09
NCKIPSD-201ENST00000294129 MRS2Q9HD23 443 aa21.84■■□□□ 1.09
NCKIPSD-201ENST00000294129 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
NCKIPSD-201ENST00000294129 USP47Q96K76 1375 aa21.82■■□□□ 1.08
NCKIPSD-201ENST00000294129 IRX6P78412 446 aaPredicted RBP21.81■■□□□ 1.08
NCKIPSD-201ENST00000294129 DCAF11Q8TEB1 546 aa21.81■■□□□ 1.08
NCKIPSD-201ENST00000294129 SPATA31E1Q6ZUB1 1445 aa21.8■■□□□ 1.08
NCKIPSD-201ENST00000294129 CARD11Q9BXL7 1154 aa21.78■■□□□ 1.08
NCKIPSD-201ENST00000294129 MBD5Q9P267 1494 aa21.78■■□□□ 1.08
NCKIPSD-201ENST00000294129 SHANK2Q9UPX8 1470 aa21.78■■□□□ 1.08
NCKIPSD-201ENST00000294129 ARHGAP5Q13017 1502 aa21.78■■□□□ 1.08
NCKIPSD-201ENST00000294129 RGL3Q3MIN7 710 aa21.78■■□□□ 1.08
NCKIPSD-201ENST00000294129 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
NCKIPSD-201ENST00000294129 CDC42BPBQ9Y5S2 1711 aa21.77■■□□□ 1.08
NCKIPSD-201ENST00000294129 CCDC141Q6ZP82 1450 aa21.76■■□□□ 1.07
NCKIPSD-201ENST00000294129 SENP3-EIF4A1A0A087X0R7 540 aa21.76■■□□□ 1.07
NCKIPSD-201ENST00000294129 SYCP2Q9BX26 1530 aa21.75■■□□□ 1.07
NCKIPSD-201ENST00000294129 TSHZ2Q9NRE2 1034 aa21.74■■□□□ 1.07
NCKIPSD-201ENST00000294129 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
NCKIPSD-201ENST00000294129 PREX2Q70Z35 1606 aa21.72■■□□□ 1.07
NCKIPSD-201ENST00000294129 ARHGEF5Q12774 1597 aa21.69■■□□□ 1.06
NCKIPSD-201ENST00000294129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.06
NCKIPSD-201ENST00000294129 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
NCKIPSD-201ENST00000294129 BCORL1Q5H9F3 1711 aa21.69■■□□□ 1.06
NCKIPSD-201ENST00000294129 RSPH4AQ5TD94 716 aa21.67■■□□□ 1.06
NCKIPSD-201ENST00000294129 FAM135AQ9P2D6 1515 aa21.66■■□□□ 1.06
NCKIPSD-201ENST00000294129 ABCC2Q92887 1545 aa21.65■■□□□ 1.06
NCKIPSD-201ENST00000294129 SHROOM2Q13796 1616 aa21.64■■□□□ 1.05
NCKIPSD-201ENST00000294129 ROCK2O75116 1388 aaKnown RBP21.63■■□□□ 1.05
NCKIPSD-201ENST00000294129 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
NCKIPSD-201ENST00000294129 KDM5CP41229 1560 aa21.62■■□□□ 1.05
NCKIPSD-201ENST00000294129 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
NCKIPSD-201ENST00000294129 KDM5DQ9BY66 1539 aa21.61■■□□□ 1.05
NCKIPSD-201ENST00000294129 POLR1AO95602 1720 aaPredicted RBP21.61■■□□□ 1.05
NCKIPSD-201ENST00000294129 RALGAPBQ86X10 1494 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms