RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
ABCF3-201ENST00000292808 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
ABCF3-201ENST00000292808 RRP7BPQ9NSQ0 103 aa20.59■□□□□ 0.89
ABCF3-201ENST00000292808 UHRF1BP1LA0JNW5 1464 aa20.58■□□□□ 0.89
ABCF3-201ENST00000292808 CFDP1Q9UEE9 299 aaPredicted RBP20.58■□□□□ 0.89
ABCF3-201ENST00000292808 CROCC2H7BZ55 1655 aa20.57■□□□□ 0.88
ABCF3-201ENST00000292808 ZCCHC11Q5TAX3 1644 aaKnown RBP20.56■□□□□ 0.88
ABCF3-201ENST00000292808 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
ABCF3-201ENST00000292808 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
ABCF3-201ENST00000292808 CDC42BPBQ9Y5S2 1711 aa20.53■□□□□ 0.88
ABCF3-201ENST00000292808 TTC37Q6PGP7 1564 aa20.53■□□□□ 0.88
ABCF3-201ENST00000292808 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
ABCF3-201ENST00000292808 ADGBQ8N7X0 1667 aa20.52■□□□□ 0.87
ABCF3-201ENST00000292808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.51■□□□□ 0.87
ABCF3-201ENST00000292808 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
ABCF3-201ENST00000292808 DENND4BO75064 1496 aaPredicted RBP20.5■□□□□ 0.87
ABCF3-201ENST00000292808 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
ABCF3-201ENST00000292808 SAMD9LQ8IVG5 1584 aa20.48■□□□□ 0.87
ABCF3-201ENST00000292808 ADGRL2O95490 1459 aa20.47■□□□□ 0.87
ABCF3-201ENST00000292808 NCOA1Q15788 1441 aa20.45■□□□□ 0.86
ABCF3-201ENST00000292808 ARHGEF5Q12774 1597 aa20.43■□□□□ 0.86
ABCF3-201ENST00000292808 MYO5CQ9NQX4 1742 aa20.43■□□□□ 0.86
ABCF3-201ENST00000292808 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
ABCF3-201ENST00000292808 MBD5Q9P267 1494 aa20.43■□□□□ 0.86
ABCF3-201ENST00000292808 SHANK2Q9UPX8 1470 aa20.43■□□□□ 0.86
ABCF3-201ENST00000292808 NEUROD1Q13562 356 aa20.39■□□□□ 0.86
ABCF3-201ENST00000292808 C9orf84Q5VXU9 1444 aa20.38■□□□□ 0.85
ABCF3-201ENST00000292808 ARHGAP5Q13017 1502 aa20.38■□□□□ 0.85
ABCF3-201ENST00000292808 SYCP2Q9BX26 1530 aa20.36■□□□□ 0.85
ABCF3-201ENST00000292808 HNRNPMP52272 730 aaKnown RBP eCLIP20.35■□□□□ 0.85
ABCF3-201ENST00000292808 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
ABCF3-201ENST00000292808 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
ABCF3-201ENST00000292808 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
ABCF3-201ENST00000292808 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
ABCF3-201ENST00000292808 MPHOSPH9Q99550 1183 aa20.33■□□□□ 0.85
ABCF3-201ENST00000292808 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
ABCF3-201ENST00000292808 PLCH2O75038 1416 aa20.32■□□□□ 0.84
ABCF3-201ENST00000292808 PZPP20742 1482 aa20.31■□□□□ 0.84
ABCF3-201ENST00000292808 WDR7Q9Y4E6 1490 aa20.31■□□□□ 0.84
ABCF3-201ENST00000292808 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
ABCF3-201ENST00000292808 ARHGEF12Q9NZN5 1544 aa20.3■□□□□ 0.84
ABCF3-201ENST00000292808 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
ABCF3-201ENST00000292808 MAST1Q9Y2H9 1570 aa20.3■□□□□ 0.84
ABCF3-201ENST00000292808 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
ABCF3-201ENST00000292808 KIAA1107Q9UPP5 1409 aa20.28■□□□□ 0.84
ABCF3-201ENST00000292808 PLEKHH2Q8IVE3 1493 aa20.27■□□□□ 0.83
ABCF3-201ENST00000292808 ABCC1P33527 1531 aa20.26■□□□□ 0.83
ABCF3-201ENST00000292808 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
ABCF3-201ENST00000292808 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
ABCF3-201ENST00000292808 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
ABCF3-201ENST00000292808 TSPY4P0CV99 314 aa20.26■□□□□ 0.83
ABCF3-201ENST00000292808 TSPY10P0CW01 314 aa20.26■□□□□ 0.83
ABCF3-201ENST00000292808 ABCA9Q8IUA7 1624 aa20.25■□□□□ 0.83
ABCF3-201ENST00000292808 FOXD1Q16676 465 aa20.25■□□□□ 0.83
ABCF3-201ENST00000292808 KIF15Q9NS87 1388 aa20.25■□□□□ 0.83
ABCF3-201ENST00000292808 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
ABCF3-201ENST00000292808 ASXL2Q76L83 1435 aa20.24■□□□□ 0.83
ABCF3-201ENST00000292808 RSPH4AQ5TD94 716 aa20.24■□□□□ 0.83
ABCF3-201ENST00000292808 MIER1Q8N108 512 aa20.24■□□□□ 0.83
ABCF3-201ENST00000292808 ANKRD30BQ9BXX2 1392 aa20.23■□□□□ 0.83
ABCF3-201ENST00000292808 PLXNC1O60486 1568 aa20.22■□□□□ 0.83
ABCF3-201ENST00000292808 KDM5DQ9BY66 1539 aa20.21■□□□□ 0.83
ABCF3-201ENST00000292808 SLC4A1APQ9BWU0 796 aaKnown RBP20.2■□□□□ 0.82
ABCF3-201ENST00000292808 EFCAB2Q5VUJ9 269 aa20.19■□□□□ 0.82
ABCF3-201ENST00000292808 TRAPPC8Q9Y2L5 1435 aa20.17■□□□□ 0.82
ABCF3-201ENST00000292808 RPRD2Q5VT52 1461 aaKnown RBP20.17■□□□□ 0.82
ABCF3-201ENST00000292808 UNC13BO14795 1591 aa20.13■□□□□ 0.81
ABCF3-201ENST00000292808 NUP155O75694 1391 aa20.13■□□□□ 0.81
ABCF3-201ENST00000292808 FANCAO15360 1455 aa20.13■□□□□ 0.81
ABCF3-201ENST00000292808 TEX14Q8IWB6 1497 aa20.13■□□□□ 0.81
ABCF3-201ENST00000292808 PKD2Q13563 968 aa20.1■□□□□ 0.81
ABCF3-201ENST00000292808 ZFYVE16Q7Z3T8 1539 aa20.1■□□□□ 0.81
ABCF3-201ENST00000292808 DUOX2Q9NRD8 1548 aa20.1■□□□□ 0.81
ABCF3-201ENST00000292808 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
ABCF3-201ENST00000292808 FAM135AQ9P2D6 1515 aa20.08■□□□□ 0.8
ABCF3-201ENST00000292808 L3MBTL2Q969R5 705 aa20.07■□□□□ 0.8
ABCF3-201ENST00000292808 NPM1P06748 294 aaKnown RBP eCLIP20.07■□□□□ 0.8
ABCF3-201ENST00000292808 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
ABCF3-201ENST00000292808 RIMBP3CA6NJZ7 1639 aa20.06■□□□□ 0.8
ABCF3-201ENST00000292808 RIMBP3BA6NNM3 1639 aa20.06■□□□□ 0.8
ABCF3-201ENST00000292808 RIMBP3Q9UFD9 1639 aa20.06■□□□□ 0.8
ABCF3-201ENST00000292808 MAGI2Q86UL8 1455 aa20.05■□□□□ 0.8
ABCF3-201ENST00000292808 ERBINQ96RT1 1412 aa20.05■□□□□ 0.8
ABCF3-201ENST00000292808 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
ABCF3-201ENST00000292808 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
ABCF3-201ENST00000292808 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
ABCF3-201ENST00000292808 IQGAP3Q86VI3 1631 aa20.04■□□□□ 0.8
ABCF3-201ENST00000292808 SCAPERQ9BY12 1400 aa20.02■□□□□ 0.8
ABCF3-201ENST00000292808 ATP7AQ04656 1500 aa20.01■□□□□ 0.79
ABCF3-201ENST00000292808 SPAG9O60271 1321 aaKnown RBP20.01■□□□□ 0.79
ABCF3-201ENST00000292808 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
ABCF3-201ENST00000292808 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
ABCF3-201ENST00000292808 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
ABCF3-201ENST00000292808 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
ABCF3-201ENST00000292808 CFAP74Q9C0B2 1584 aa19.97■□□□□ 0.79
ABCF3-201ENST00000292808 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
ABCF3-201ENST00000292808 DEPDC5O75140 1603 aa19.95■□□□□ 0.78
ABCF3-201ENST00000292808 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
ABCF3-201ENST00000292808 PLA2R1Q13018 1463 aa19.94■□□□□ 0.78
ABCF3-201ENST00000292808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms