RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 NUTM2DQ5VT03 806 aaPredicted RBP13.02□□□□□ -0.32
KPNB1-201ENST00000290158 CYB5RLQ6IPT4 315 aa13.02□□□□□ -0.32
KPNB1-201ENST00000290158 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
KPNB1-201ENST00000290158 TNNT3P45378 269 aaPredicted RBP13□□□□□ -0.33
KPNB1-201ENST00000290158 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
KPNB1-201ENST00000290158 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
KPNB1-201ENST00000290158 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
KPNB1-201ENST00000290158 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
KPNB1-201ENST00000290158 FRAT1Q92837 279 aaPredicted RBP12.99□□□□□ -0.33
KPNB1-201ENST00000290158 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
KPNB1-201ENST00000290158 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
KPNB1-201ENST00000290158 CCDC88BA6NC98 1476 aa12.98□□□□□ -0.33
KPNB1-201ENST00000290158 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
KPNB1-201ENST00000290158 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
KPNB1-201ENST00000290158 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
KPNB1-201ENST00000290158 NAP1L2Q9ULW6 460 aaPredicted RBP12.97□□□□□ -0.33
KPNB1-201ENST00000290158 NUDCQ9Y266 331 aa12.97□□□□□ -0.33
KPNB1-201ENST00000290158 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.33
KPNB1-201ENST00000290158 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
KPNB1-201ENST00000290158 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
KPNB1-201ENST00000290158 FOXD1Q16676 465 aa12.95□□□□□ -0.34
KPNB1-201ENST00000290158 FHAD1B1AJZ9 1412 aa12.95□□□□□ -0.34
KPNB1-201ENST00000290158 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
KPNB1-201ENST00000290158 WIZO95785 1651 aa12.94□□□□□ -0.34
KPNB1-201ENST00000290158 NRDCO43847 1150 aa12.94□□□□□ -0.34
KPNB1-201ENST00000290158 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
KPNB1-201ENST00000290158 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
KPNB1-201ENST00000290158 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
KPNB1-201ENST00000290158 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
KPNB1-201ENST00000290158 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
KPNB1-201ENST00000290158 PTMSP20962 102 aa12.91□□□□□ -0.34
KPNB1-201ENST00000290158 KIF3BO15066 747 aa12.91□□□□□ -0.34
KPNB1-201ENST00000290158 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
KPNB1-201ENST00000290158 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
KPNB1-201ENST00000290158 EID1Q9Y6B2 187 aa12.9□□□□□ -0.34
KPNB1-201ENST00000290158 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
KPNB1-201ENST00000290158 ARHGAP35Q9NRY4 1499 aa12.89□□□□□ -0.35
KPNB1-201ENST00000290158 TMF1P82094 1093 aa12.89□□□□□ -0.35
KPNB1-201ENST00000290158 KIAA2012Q0VF49 1180 aa12.89□□□□□ -0.35
KPNB1-201ENST00000290158 PRKCSHP14314 528 aaPredicted RBP12.88□□□□□ -0.35
KPNB1-201ENST00000290158 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
KPNB1-201ENST00000290158 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
KPNB1-201ENST00000290158 PKD2Q13563 968 aa12.87□□□□□ -0.35
KPNB1-201ENST00000290158 MORC1Q86VD1 984 aa12.87□□□□□ -0.35
KPNB1-201ENST00000290158 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
KPNB1-201ENST00000290158 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
KPNB1-201ENST00000290158 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
KPNB1-201ENST00000290158 MEX3CQ5U5Q3 659 aaKnown RBP12.86□□□□□ -0.35
KPNB1-201ENST00000290158 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
KPNB1-201ENST00000290158 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
KPNB1-201ENST00000290158 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
KPNB1-201ENST00000290158 PKNOX2Q96KN3 472 aa12.85□□□□□ -0.35
KPNB1-201ENST00000290158 CLSTN1O94985 981 aa12.85□□□□□ -0.35
KPNB1-201ENST00000290158 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
KPNB1-201ENST00000290158 GBP4Q96PP9 640 aa12.85□□□□□ -0.35
KPNB1-201ENST00000290158 FGD1P98174 961 aa12.83□□□□□ -0.36
KPNB1-201ENST00000290158 CADPSQ9ULU8 1353 aa12.83□□□□□ -0.36
KPNB1-201ENST00000290158 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
KPNB1-201ENST00000290158 APBB1O00213 710 aa12.82□□□□□ -0.36
KPNB1-201ENST00000290158 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
KPNB1-201ENST00000290158 KCNJ4P48050 445 aa12.82□□□□□ -0.36
KPNB1-201ENST00000290158 LTV1Q96GA3 475 aaPredicted RBP12.81□□□□□ -0.36
KPNB1-201ENST00000290158 GSE1Q14687 1217 aa12.81□□□□□ -0.36
KPNB1-201ENST00000290158 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
KPNB1-201ENST00000290158 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
KPNB1-201ENST00000290158 NUP155O75694 1391 aa12.8□□□□□ -0.36
KPNB1-201ENST00000290158 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
KPNB1-201ENST00000290158 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
KPNB1-201ENST00000290158 FAM69CQ0P6D2 419 aa12.79□□□□□ -0.36
KPNB1-201ENST00000290158 PHF23Q9BUL5 403 aaPredicted RBP12.79□□□□□ -0.36
KPNB1-201ENST00000290158 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
KPNB1-201ENST00000290158 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
KPNB1-201ENST00000290158 FANCIQ9NVI1 1328 aa12.79□□□□□ -0.36
KPNB1-201ENST00000290158 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
KPNB1-201ENST00000290158 KANK4Q5T7N3 995 aaPredicted RBP12.78□□□□□ -0.36
KPNB1-201ENST00000290158 MSH5O43196 834 aa12.77□□□□□ -0.36
KPNB1-201ENST00000290158 SLKQ9H2G2 1235 aaPredicted RBP12.77□□□□□ -0.36
KPNB1-201ENST00000290158 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
KPNB1-201ENST00000290158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.77□□□□□ -0.37
KPNB1-201ENST00000290158 ANKRD30AQ9BXX3 1397 aa12.76□□□□□ -0.37
KPNB1-201ENST00000290158 MS4A1P11836 297 aa12.76□□□□□ -0.37
KPNB1-201ENST00000290158 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
KPNB1-201ENST00000290158 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
KPNB1-201ENST00000290158 FMN1Q68DA7 1419 aa12.75□□□□□ -0.37
KPNB1-201ENST00000290158 PDE4CQ08493 712 aa12.75□□□□□ -0.37
KPNB1-201ENST00000290158 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
KPNB1-201ENST00000290158 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
KPNB1-201ENST00000290158 EVA1CP58658 441 aa12.74□□□□□ -0.37
KPNB1-201ENST00000290158 G3V3G9 751 aa12.74□□□□□ -0.37
KPNB1-201ENST00000290158 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
KPNB1-201ENST00000290158 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
KPNB1-201ENST00000290158 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
KPNB1-201ENST00000290158 A0A0U1RQG5 324 aaPredicted RBP12.73□□□□□ -0.37
KPNB1-201ENST00000290158 RAPGEF2Q9Y4G8 1499 aa12.73□□□□□ -0.37
KPNB1-201ENST00000290158 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
KPNB1-201ENST00000290158 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
KPNB1-201ENST00000290158 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
KPNB1-201ENST00000290158 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
KPNB1-201ENST00000290158 AMPHP49418 695 aa12.71□□□□□ -0.37
KPNB1-201ENST00000290158 PTPRGP23470 1445 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms