RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
PCDHA13-201ENST00000289272 HSCBQ8IWL3 235 aa22.46■■□□□ 1.19
PCDHA13-201ENST00000289272 CHAF1AQ13111 956 aaPredicted RBP22.45■■□□□ 1.18
PCDHA13-201ENST00000289272 PKD2Q13563 968 aa22.43■■□□□ 1.18
PCDHA13-201ENST00000289272 TMF1P82094 1093 aa22.42■■□□□ 1.18
PCDHA13-201ENST00000289272 FOXD1Q16676 465 aa22.42■■□□□ 1.18
PCDHA13-201ENST00000289272 HSP90AB1P08238 724 aaKnown RBP22.41■■□□□ 1.18
PCDHA13-201ENST00000289272 CC2D1BQ5T0F9 858 aaKnown RBP22.4■■□□□ 1.18
PCDHA13-201ENST00000289272 FTSJ3Q8IY81 847 aaKnown RBP22.4■■□□□ 1.18
PCDHA13-201ENST00000289272 GOLGA6L6A8MZA4 724 aa22.39■■□□□ 1.18
PCDHA13-201ENST00000289272 POGKQ9P215 609 aa22.39■■□□□ 1.17
PCDHA13-201ENST00000289272 NUDCQ9Y266 331 aa22.38■■□□□ 1.17
PCDHA13-201ENST00000289272 GBP4Q96PP9 640 aa22.38■■□□□ 1.17
PCDHA13-201ENST00000289272 RGS3P49796 1198 aa22.37■■□□□ 1.17
PCDHA13-201ENST00000289272 PDE3BQ13370 1112 aa22.36■■□□□ 1.17
PCDHA13-201ENST00000289272 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
PCDHA13-201ENST00000289272 NRDCO43847 1150 aa22.34■■□□□ 1.17
PCDHA13-201ENST00000289272 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
PCDHA13-201ENST00000289272 RALBP1Q15311 655 aa22.33■■□□□ 1.17
PCDHA13-201ENST00000289272 GOLGA6L3A6NEY3 463 aa22.32■■□□□ 1.16
PCDHA13-201ENST00000289272 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
PCDHA13-201ENST00000289272 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
PCDHA13-201ENST00000289272 ZRSR1Q15695 479 aaKnown RBP22.31■■□□□ 1.16
PCDHA13-201ENST00000289272 CCDC18Q5T9S5 1454 aa22.3■■□□□ 1.16
PCDHA13-201ENST00000289272 NUP155O75694 1391 aa22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 RCAN3Q9UKA8 241 aa22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 HAP1P54257 671 aaPredicted RBP22.29■■□□□ 1.16
PCDHA13-201ENST00000289272 MAPK8IP3Q9UPT6 1336 aa22.28■■□□□ 1.16
PCDHA13-201ENST00000289272 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 KTN1Q86UP2 1357 aaKnown RBP22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 NEUROD2Q15784 382 aa22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 ROCK2O75116 1388 aaKnown RBP22.27■■□□□ 1.16
PCDHA13-201ENST00000289272 KIF21BO75037 1637 aa22.26■■□□□ 1.15
PCDHA13-201ENST00000289272 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
PCDHA13-201ENST00000289272 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
PCDHA13-201ENST00000289272 IGF1RP08069 1367 aa22.24■■□□□ 1.15
PCDHA13-201ENST00000289272 GSE1Q14687 1217 aa22.24■■□□□ 1.15
PCDHA13-201ENST00000289272 HSP90AA2PQ14568 343 aaPredicted RBP22.22■■□□□ 1.15
PCDHA13-201ENST00000289272 KIAA2012Q0VF49 1180 aa22.2■■□□□ 1.14
PCDHA13-201ENST00000289272 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
PCDHA13-201ENST00000289272 FRAT1Q92837 279 aaPredicted RBP22.18■■□□□ 1.14
PCDHA13-201ENST00000289272 PMFBP1Q8TBY8 1022 aa22.17■■□□□ 1.14
PCDHA13-201ENST00000289272 ZBED9Q6R2W3 1325 aa22.17■■□□□ 1.14
PCDHA13-201ENST00000289272 SYAP1Q96A49 352 aaPredicted RBP22.17■■□□□ 1.14
PCDHA13-201ENST00000289272 TRHP20396 242 aaPredicted RBP22.16■■□□□ 1.14
PCDHA13-201ENST00000289272 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 DDX11L8A8MPP1 907 aa22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 RWDD1Q9H446 243 aaPredicted RBP22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 MCCP23508 829 aa22.15■■□□□ 1.14
PCDHA13-201ENST00000289272 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
PCDHA13-201ENST00000289272 A0A0G2JS52 829 aa22.14■■□□□ 1.13
PCDHA13-201ENST00000289272 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
PCDHA13-201ENST00000289272 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
PCDHA13-201ENST00000289272 SKOR2Q2VWA4 1001 aaPredicted RBP22.1■■□□□ 1.13
PCDHA13-201ENST00000289272 GGT6Q6P531 493 aa22.1■■□□□ 1.13
PCDHA13-201ENST00000289272 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
PCDHA13-201ENST00000289272 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
PCDHA13-201ENST00000289272 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
PCDHA13-201ENST00000289272 HNRNPMP52272 730 aaKnown RBP eCLIP22.08■■□□□ 1.13
PCDHA13-201ENST00000289272 CENPQQ7L2Z9 268 aaPredicted RBP22.08■■□□□ 1.12
PCDHA13-201ENST00000289272 EIF3AQ14152 1382 aaKnown RBP22.08■■□□□ 1.12
PCDHA13-201ENST00000289272 LRRC9Q6ZRR7 1453 aa22.07■■□□□ 1.12
PCDHA13-201ENST00000289272 FGD6Q6ZV73 1430 aa22.06■■□□□ 1.12
PCDHA13-201ENST00000289272 IPO8O15397 1037 aaKnown RBP22.06■■□□□ 1.12
PCDHA13-201ENST00000289272 PDE4AP27815 886 aa22.06■■□□□ 1.12
PCDHA13-201ENST00000289272 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
PCDHA13-201ENST00000289272 FAM161AQ3B820 660 aa22.05■■□□□ 1.12
PCDHA13-201ENST00000289272 SRPK2P78362 688 aaKnown RBP22.05■■□□□ 1.12
PCDHA13-201ENST00000289272 MLECQ14165 292 aa22.04■■□□□ 1.12
PCDHA13-201ENST00000289272 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
PCDHA13-201ENST00000289272 SPAG9O60271 1321 aaKnown RBP22.04■■□□□ 1.12
PCDHA13-201ENST00000289272 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
PCDHA13-201ENST00000289272 PRKRIP1Q9H875 184 aaPredicted RBP22.02■■□□□ 1.12
PCDHA13-201ENST00000289272 CUX1P39880 1505 aa22.02■■□□□ 1.12
PCDHA13-201ENST00000289272 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
PCDHA13-201ENST00000289272 LMOD2Q6P5Q4 547 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 MYOM3Q5VTT5 1437 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 PLCB2Q00722 1185 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
PCDHA13-201ENST00000289272 PLEKHG5O94827 1062 aa22■■□□□ 1.11
PCDHA13-201ENST00000289272 GOLGA6L4A6NEF3 574 aa22■■□□□ 1.11
PCDHA13-201ENST00000289272 UACAQ9BZF9 1416 aa21.99■■□□□ 1.11
PCDHA13-201ENST00000289272 PHF14O94880 888 aa21.99■■□□□ 1.11
PCDHA13-201ENST00000289272 PTPRGP23470 1445 aa21.97■■□□□ 1.11
PCDHA13-201ENST00000289272 CASKIN1Q8WXD9 1431 aa21.97■■□□□ 1.11
PCDHA13-201ENST00000289272 SLKQ9H2G2 1235 aaPredicted RBP21.97■■□□□ 1.11
PCDHA13-201ENST00000289272 CSPP1Q1MSJ5 1256 aa21.96■■□□□ 1.11
PCDHA13-201ENST00000289272 CALD1Q05682 793 aaKnown RBP21.96■■□□□ 1.11
PCDHA13-201ENST00000289272 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
PCDHA13-201ENST00000289272 ST20-MTHFSA0A0A6YYL1 179 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 KIF3BO15066 747 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 MAP7D2Q96T17 732 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
PCDHA13-201ENST00000289272 MTERF4Q7Z6M4 381 aaKnown RBP21.94■■□□□ 1.1
PCDHA13-201ENST00000289272 CFTRP13569 1480 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms