RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 CBX1P83916 185 aa5.65□□□□□ -1.5
NCOA1-201ENST00000288599 NRDCO43847 1150 aa5.65□□□□□ -1.5
NCOA1-201ENST00000288599 IRX6P78412 446 aaPredicted RBP5.65□□□□□ -1.51
NCOA1-201ENST00000288599 NAP1L2Q9ULW6 460 aaPredicted RBP5.65□□□□□ -1.51
NCOA1-201ENST00000288599 PTMAP06454 111 aaKnown RBP5.64□□□□□ -1.51
NCOA1-201ENST00000288599 ZNF777Q9ULD5 760 aaPredicted RBP5.64□□□□□ -1.51
NCOA1-201ENST00000288599 SPRYD3Q8NCJ5 442 aa5.63□□□□□ -1.51
NCOA1-201ENST00000288599 R3HCC1Q9Y3T6 440 aaKnown RBP5.63□□□□□ -1.51
NCOA1-201ENST00000288599 PLCB2Q00722 1185 aa5.63□□□□□ -1.51
NCOA1-201ENST00000288599 HMGXB3Q12766 1538 aa5.63□□□□□ -1.51
NCOA1-201ENST00000288599 NCAPD3P42695 1498 aa5.63□□□□□ -1.51
NCOA1-201ENST00000288599 GTF2E1P29083 439 aaPredicted RBP5.63□□□□□ -1.51
NCOA1-201ENST00000288599 MARCH6O60337 910 aa5.62□□□□□ -1.51
NCOA1-201ENST00000288599 PPP1R1BQ9UD71 204 aaPredicted RBP5.62□□□□□ -1.51
NCOA1-201ENST00000288599 OS9Q13438 667 aaPredicted RBP5.62□□□□□ -1.51
NCOA1-201ENST00000288599 RAPGEF2Q9Y4G8 1499 aa5.61□□□□□ -1.51
NCOA1-201ENST00000288599 PABPN1Q86U42 306 aaKnown RBP eCLIP5.61□□□□□ -1.51
NCOA1-201ENST00000288599 GNL2Q13823 731 aaKnown RBP5.61□□□□□ -1.51
NCOA1-201ENST00000288599 CASC1Q6TDU7 716 aa5.61□□□□□ -1.51
NCOA1-201ENST00000288599 CLIP1P30622 1438 aa5.61□□□□□ -1.51
NCOA1-201ENST00000288599 PDCL3Q9H2J4 239 aa5.61□□□□□ -1.51
NCOA1-201ENST00000288599 WASHC2AQ641Q2 1341 aa5.61□□□□□ -1.51
NCOA1-201ENST00000288599 CUX2O14529 1486 aa5.6□□□□□ -1.51
NCOA1-201ENST00000288599 BAZ1BQ9UIG0 1483 aaKnown RBP5.6□□□□□ -1.51
NCOA1-201ENST00000288599 CSB-PGBD3P0DP91 1061 aa5.6□□□□□ -1.51
NCOA1-201ENST00000288599 SENP3-EIF4A1A0A087X0R7 540 aa5.6□□□□□ -1.51
NCOA1-201ENST00000288599 CUX1P39880 1505 aa5.6□□□□□ -1.51
NCOA1-201ENST00000288599 PRKCSHP14314 528 aaPredicted RBP5.6□□□□□ -1.51
NCOA1-201ENST00000288599 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.6□□□□□ -1.51
NCOA1-201ENST00000288599 C16orf71Q8IYS4 520 aaPredicted RBP5.59□□□□□ -1.51
NCOA1-201ENST00000288599 ERICH3Q5RHP9 1530 aa5.59□□□□□ -1.51
NCOA1-201ENST00000288599 ERICH6BQ5W0A0 696 aa5.59□□□□□ -1.51
NCOA1-201ENST00000288599 FAM9BQ8IZU0 186 aa5.59□□□□□ -1.51
NCOA1-201ENST00000288599 CFTRP13569 1480 aa5.59□□□□□ -1.51
NCOA1-201ENST00000288599 UQCRHLA0A096LP55 91 aa5.59□□□□□ -1.51
NCOA1-201ENST00000288599 HDGFP51858 240 aaKnown RBP5.59□□□□□ -1.52
NCOA1-201ENST00000288599 ZNF330Q9Y3S2 320 aaPredicted RBP5.59□□□□□ -1.52
NCOA1-201ENST00000288599 GOLGA3Q08378 1498 aa5.58□□□□□ -1.52
NCOA1-201ENST00000288599 ARAP1Q96P48 1450 aa5.58□□□□□ -1.52
NCOA1-201ENST00000288599 FRAT2O75474 233 aaPredicted RBP5.58□□□□□ -1.52
NCOA1-201ENST00000288599 RBM19Q9Y4C8 960 aaKnown RBP5.58□□□□□ -1.52
NCOA1-201ENST00000288599 KCNJ4P48050 445 aa5.58□□□□□ -1.52
NCOA1-201ENST00000288599 VPS8Q8N3P4 1428 aa5.58□□□□□ -1.52
NCOA1-201ENST00000288599 PLCD3Q8N3E9 789 aa5.58□□□□□ -1.52
NCOA1-201ENST00000288599 LAS1LQ9Y4W2 734 aaKnown RBP5.57□□□□□ -1.52
NCOA1-201ENST00000288599 CEP164Q9UPV0 1460 aa5.57□□□□□ -1.52
NCOA1-201ENST00000288599 CCDC136Q96JN2 1154 aa5.56□□□□□ -1.52
NCOA1-201ENST00000288599 CCDC43Q96MW1 224 aaKnown RBP5.56□□□□□ -1.52
NCOA1-201ENST00000288599 SRPK2P78362 688 aaKnown RBP5.56□□□□□ -1.52
NCOA1-201ENST00000288599 NOL10Q9BSC4 688 aaKnown RBP5.56□□□□□ -1.52
NCOA1-201ENST00000288599 CALRP27797 417 aaKnown RBP5.55□□□□□ -1.52
NCOA1-201ENST00000288599 TPM4P67936 248 aa5.55□□□□□ -1.52
NCOA1-201ENST00000288599 HNRNPUQ00839 825 aaKnown RBP eCLIP5.55□□□□□ -1.52
NCOA1-201ENST00000288599 RASSF8Q8NHQ8 419 aa5.55□□□□□ -1.52
NCOA1-201ENST00000288599 TMEM132AQ24JP5 1023 aa5.55□□□□□ -1.52
NCOA1-201ENST00000288599 ARID3CA6NKF2 412 aa5.55□□□□□ -1.52
NCOA1-201ENST00000288599 TNNT3P45378 269 aaPredicted RBP5.55□□□□□ -1.52
NCOA1-201ENST00000288599 GSE1Q14687 1217 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 FBXW7Q969H0 707 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 RAD21O60216 631 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 TAF7LQ5H9L4 462 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 AMOTL1Q8IY63 956 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 CCDC34Q96HJ3 373 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 GOLGA6L22H0YM25 854 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 CRBNQ96SW2 442 aa5.54□□□□□ -1.52
NCOA1-201ENST00000288599 GOLGA6L4A6NEF3 574 aa5.53□□□□□ -1.52
NCOA1-201ENST00000288599 UQCRHP07919 91 aa5.53□□□□□ -1.52
NCOA1-201ENST00000288599 USP35Q9P2H5 1018 aa5.53□□□□□ -1.52
NCOA1-201ENST00000288599 RSPH4AQ5TD94 716 aa5.53□□□□□ -1.52
NCOA1-201ENST00000288599 RRBP1Q9P2E9 1410 aaKnown RBP5.53□□□□□ -1.52
NCOA1-201ENST00000288599 PATL2C9JE40 543 aaKnown RBP5.53□□□□□ -1.52
NCOA1-201ENST00000288599 ARHGAP35Q9NRY4 1499 aa5.52□□□□□ -1.53
NCOA1-201ENST00000288599 WDR43Q15061 677 aaKnown RBP eCLIP5.52□□□□□ -1.53
NCOA1-201ENST00000288599 BEGAINQ9BUH8 593 aa5.52□□□□□ -1.53
NCOA1-201ENST00000288599 ADRA2BP18089 450 aa5.52□□□□□ -1.53
NCOA1-201ENST00000288599 PRDM2Q13029 1718 aa5.52□□□□□ -1.53
NCOA1-201ENST00000288599 GRIPAP1Q4V328 841 aa5.51□□□□□ -1.53
NCOA1-201ENST00000288599 GORABQ5T7V8 394 aa5.51□□□□□ -1.53
NCOA1-201ENST00000288599 DDRGK1Q96HY6 314 aa5.51□□□□□ -1.53
NCOA1-201ENST00000288599 ZMYND15Q9H091 742 aa5.51□□□□□ -1.53
NCOA1-201ENST00000288599 PPM1GO15355 546 aaPredicted RBP5.51□□□□□ -1.53
NCOA1-201ENST00000288599 ODF2Q5BJF6 829 aa5.51□□□□□ -1.53
NCOA1-201ENST00000288599 KDM5BQ9UGL1 1544 aa5.5□□□□□ -1.53
NCOA1-201ENST00000288599 MAPKBP1O60336 1514 aa5.5□□□□□ -1.53
NCOA1-201ENST00000288599 MAP3K1Q13233 1512 aa5.5□□□□□ -1.53
NCOA1-201ENST00000288599 EVA1CP58658 441 aa5.49□□□□□ -1.53
NCOA1-201ENST00000288599 SAMD1Q6SPF0 538 aaPredicted RBP5.48□□□□□ -1.53
NCOA1-201ENST00000288599 FTSJ3Q8IY81 847 aaKnown RBP5.48□□□□□ -1.53
NCOA1-201ENST00000288599 DRC7Q8IY82 874 aa5.48□□□□□ -1.53
NCOA1-201ENST00000288599 DHX57Q6P158 1386 aaKnown RBP5.48□□□□□ -1.53
NCOA1-201ENST00000288599 IGF1RP08069 1367 aa5.48□□□□□ -1.53
NCOA1-201ENST00000288599 CA8P35219 290 aa5.48□□□□□ -1.53
NCOA1-201ENST00000288599 CFAP53Q96M91 514 aa5.48□□□□□ -1.53
NCOA1-201ENST00000288599 POGKQ9P215 609 aa5.48□□□□□ -1.53
NCOA1-201ENST00000288599 BECN1Q14457 450 aa5.48□□□□□ -1.53
NCOA1-201ENST00000288599 NEBLO76041 1014 aa5.47□□□□□ -1.53
NCOA1-201ENST00000288599 CCDC112Q8NEF3 446 aa5.47□□□□□ -1.53
NCOA1-201ENST00000288599 APPP05067 770 aa5.47□□□□□ -1.53
NCOA1-201ENST00000288599 TRIM21P19474 475 aaKnown RBP5.47□□□□□ -1.53
NCOA1-201ENST00000288599 SSFA2P28290 1259 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms