RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 SKOR2Q2VWA4 1001 aaPredicted RBP10.6□□□□□ -0.71
CACNA1D-201ENST00000288139 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
CACNA1D-201ENST00000288139 CALD1Q05682 793 aaKnown RBP10.59□□□□□ -0.71
CACNA1D-201ENST00000288139 CNKSR2Q8WXI2 1034 aa10.59□□□□□ -0.71
CACNA1D-201ENST00000288139 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
CACNA1D-201ENST00000288139 FBLN2P98095 1184 aa10.58□□□□□ -0.72
CACNA1D-201ENST00000288139 NAP1L5Q96NT1 182 aaPredicted RBP10.58□□□□□ -0.72
CACNA1D-201ENST00000288139 SETQ01105 290 aaPredicted RBP10.57□□□□□ -0.72
CACNA1D-201ENST00000288139 FTSJ3Q8IY81 847 aaKnown RBP10.57□□□□□ -0.72
CACNA1D-201ENST00000288139 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
CACNA1D-201ENST00000288139 SCAPERQ9BY12 1400 aa10.56□□□□□ -0.72
CACNA1D-201ENST00000288139 CHMP4CQ96CF2 233 aa10.56□□□□□ -0.72
CACNA1D-201ENST00000288139 NUDCQ9Y266 331 aa10.56□□□□□ -0.72
CACNA1D-201ENST00000288139 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
CACNA1D-201ENST00000288139 HTATSF1O43719 755 aaKnown RBP10.55□□□□□ -0.72
CACNA1D-201ENST00000288139 MCCP23508 829 aa10.55□□□□□ -0.72
CACNA1D-201ENST00000288139 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
CACNA1D-201ENST00000288139 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 HDAC5Q9UQL6 1122 aa10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 GNL2Q13823 731 aaKnown RBP10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 LAS1LQ9Y4W2 734 aaKnown RBP10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 TNNT3P45378 269 aaPredicted RBP10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 EFCAB5A4FU69 1503 aa10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 NLRP13Q86W25 1043 aa10.54□□□□□ -0.72
CACNA1D-201ENST00000288139 KIF15Q9NS87 1388 aa10.53□□□□□ -0.72
CACNA1D-201ENST00000288139 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
CACNA1D-201ENST00000288139 ANKRD30AQ9BXX3 1397 aa10.53□□□□□ -0.72
CACNA1D-201ENST00000288139 ANO8Q9HCE9 1232 aaPredicted RBP10.53□□□□□ -0.72
CACNA1D-201ENST00000288139 CNTLNQ9NXG0 1405 aa10.53□□□□□ -0.72
CACNA1D-201ENST00000288139 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
CACNA1D-201ENST00000288139 KCNJ4P48050 445 aa10.52□□□□□ -0.72
CACNA1D-201ENST00000288139 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.72
CACNA1D-201ENST00000288139 MAP3K1Q13233 1512 aa10.52□□□□□ -0.73
CACNA1D-201ENST00000288139 MROH2BQ7Z745 1585 aa10.52□□□□□ -0.73
CACNA1D-201ENST00000288139 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.51□□□□□ -0.73
CACNA1D-201ENST00000288139 CGNL1Q0VF96 1302 aa10.51□□□□□ -0.73
CACNA1D-201ENST00000288139 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
CACNA1D-201ENST00000288139 WASHC2CQ9Y4E1 1318 aa10.51□□□□□ -0.73
CACNA1D-201ENST00000288139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.73
CACNA1D-201ENST00000288139 TPM4P67936 248 aa10.51□□□□□ -0.73
CACNA1D-201ENST00000288139 RRP12Q5JTH9 1297 aaKnown RBP10.51□□□□□ -0.73
CACNA1D-201ENST00000288139 DCAF8L1A6NGE4 600 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 PMFBP1Q8TBY8 1022 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 CARMIL1Q5VZK9 1371 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 RWDD1Q9H446 243 aaPredicted RBP10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 WIZO95785 1651 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 ZBTB7CA1YPR0 619 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 KANK1Q14678 1352 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 TMF1P82094 1093 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 GOLGA6L3A6NEY3 463 aa10.5□□□□□ -0.73
CACNA1D-201ENST00000288139 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
CACNA1D-201ENST00000288139 DHX8Q14562 1220 aaKnown RBP10.49□□□□□ -0.73
CACNA1D-201ENST00000288139 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
CACNA1D-201ENST00000288139 CENPQQ7L2Z9 268 aaPredicted RBP10.49□□□□□ -0.73
CACNA1D-201ENST00000288139 CARD11Q9BXL7 1154 aa10.49□□□□□ -0.73
CACNA1D-201ENST00000288139 DRC7Q8IY82 874 aa10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 ATP6V1DQ9Y5K8 247 aa10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 PLEKHH2Q8IVE3 1493 aa10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 MIA2Q96PC5 1412 aa10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 RCAN3Q9UKA8 241 aa10.48□□□□□ -0.73
CACNA1D-201ENST00000288139 PLEKHD1A6NEE1 506 aa10.47□□□□□ -0.73
CACNA1D-201ENST00000288139 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
CACNA1D-201ENST00000288139 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
CACNA1D-201ENST00000288139 GSE1Q14687 1217 aa10.47□□□□□ -0.73
CACNA1D-201ENST00000288139 CFDP1Q9UEE9 299 aaPredicted RBP10.46□□□□□ -0.73
CACNA1D-201ENST00000288139 OS9Q13438 667 aaPredicted RBP10.46□□□□□ -0.73
CACNA1D-201ENST00000288139 HSP90AB1P08238 724 aaKnown RBP10.46□□□□□ -0.74
CACNA1D-201ENST00000288139 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.45□□□□□ -0.74
CACNA1D-201ENST00000288139 FYCO1Q9BQS8 1478 aa10.45□□□□□ -0.74
CACNA1D-201ENST00000288139 RRBP1Q9P2E9 1410 aaKnown RBP10.45□□□□□ -0.74
CACNA1D-201ENST00000288139 CUX2O14529 1486 aa10.45□□□□□ -0.74
CACNA1D-201ENST00000288139 SOGA1O94964 1423 aa10.44□□□□□ -0.74
CACNA1D-201ENST00000288139 PDIA4P13667 645 aaKnown RBP10.44□□□□□ -0.74
CACNA1D-201ENST00000288139 KIF3AQ9Y496 699 aa10.44□□□□□ -0.74
CACNA1D-201ENST00000288139 CARMIL2Q6F5E8 1435 aa10.43□□□□□ -0.74
CACNA1D-201ENST00000288139 TAF3Q5VWG9 929 aa10.43□□□□□ -0.74
CACNA1D-201ENST00000288139 MYBBP1AQ9BQG0 1328 aaKnown RBP10.42□□□□□ -0.74
CACNA1D-201ENST00000288139 FAM161AQ3B820 660 aa10.42□□□□□ -0.74
CACNA1D-201ENST00000288139 HMMRO75330 724 aa10.41□□□□□ -0.74
CACNA1D-201ENST00000288139 HMGN5P82970 282 aaKnown RBP10.41□□□□□ -0.74
CACNA1D-201ENST00000288139 G3V3G9 751 aa10.41□□□□□ -0.74
CACNA1D-201ENST00000288139 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
CACNA1D-201ENST00000288139 TPM3P06753 285 aa10.41□□□□□ -0.74
CACNA1D-201ENST00000288139 TCEAL9Q9UHQ7 104 aa10.41□□□□□ -0.74
CACNA1D-201ENST00000288139 CECR2Q9BXF3 1484 aa10.4□□□□□ -0.74
CACNA1D-201ENST00000288139 ZNF777Q9ULD5 760 aaPredicted RBP10.4□□□□□ -0.74
CACNA1D-201ENST00000288139 SUPT6HQ7KZ85 1726 aaKnown RBP10.4□□□□□ -0.74
CACNA1D-201ENST00000288139 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
CACNA1D-201ENST00000288139 BRD4O60885 1362 aaPredicted RBP10.4□□□□□ -0.74
CACNA1D-201ENST00000288139 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.75
CACNA1D-201ENST00000288139 CCDC70Q6NSX1 233 aa10.39□□□□□ -0.75
CACNA1D-201ENST00000288139 TPM2P07951 284 aa10.39□□□□□ -0.75
CACNA1D-201ENST00000288139 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
CACNA1D-201ENST00000288139 KIF16BQ96L93 1317 aa10.38□□□□□ -0.75
CACNA1D-201ENST00000288139 SEPT11Q9NVA2 429 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms