RNA–Protein interactions for RNA: ENST00000287916.8

CLDN12-201, Transcript of claudin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN12, Length 3,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-201ENST00000287916 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
CLDN12-201ENST00000287916 TIAM1Q13009 1591 aa10.62□□□□□ -0.71
CLDN12-201ENST00000287916 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
CLDN12-201ENST00000287916 CFDP1Q9UEE9 299 aaPredicted RBP10.61□□□□□ -0.71
CLDN12-201ENST00000287916 CANXP27824 592 aaKnown RBP10.6□□□□□ -0.71
CLDN12-201ENST00000287916 CFTRP13569 1480 aa10.6□□□□□ -0.71
CLDN12-201ENST00000287916 UACAQ9BZF9 1416 aa10.6□□□□□ -0.71
CLDN12-201ENST00000287916 CNTLNQ9NXG0 1405 aa10.6□□□□□ -0.71
CLDN12-201ENST00000287916 FGD5Q6ZNL6 1462 aa10.6□□□□□ -0.71
CLDN12-201ENST00000287916 ERICH3Q5RHP9 1530 aa10.59□□□□□ -0.71
CLDN12-201ENST00000287916 TNNT2P45379 298 aaPredicted RBP10.59□□□□□ -0.71
CLDN12-201ENST00000287916 ARID4BQ4LE39 1312 aaPredicted RBP10.58□□□□□ -0.72
CLDN12-201ENST00000287916 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
CLDN12-201ENST00000287916 SLKQ9H2G2 1235 aaPredicted RBP10.58□□□□□ -0.72
CLDN12-201ENST00000287916 RRP1P56182 461 aaKnown RBP10.57□□□□□ -0.72
CLDN12-201ENST00000287916 ERICH6BQ5W0A0 696 aa10.57□□□□□ -0.72
CLDN12-201ENST00000287916 NAIPQ13075 1403 aa10.57□□□□□ -0.72
CLDN12-201ENST00000287916 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
CLDN12-201ENST00000287916 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
CLDN12-201ENST00000287916 C20orf194Q5TEA3 1177 aa10.55□□□□□ -0.72
CLDN12-201ENST00000287916 USP47Q96K76 1375 aa10.55□□□□□ -0.72
CLDN12-201ENST00000287916 AEBP2Q6ZN18 517 aaPredicted RBP10.55□□□□□ -0.72
CLDN12-201ENST00000287916 DNAJC5BQ9UF47 199 aa10.55□□□□□ -0.72
CLDN12-201ENST00000287916 PNISRQ8TF01 805 aaKnown RBP10.54□□□□□ -0.72
CLDN12-201ENST00000287916 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
CLDN12-201ENST00000287916 FRAT1Q92837 279 aaPredicted RBP10.54□□□□□ -0.72
CLDN12-201ENST00000287916 NCOA2Q15596 1464 aa10.53□□□□□ -0.72
CLDN12-201ENST00000287916 WDR43Q15061 677 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLDN12-201ENST00000287916 CADPSQ9ULU8 1353 aa10.52□□□□□ -0.72
CLDN12-201ENST00000287916 CC2D2AQ9P2K1 1620 aa10.52□□□□□ -0.73
CLDN12-201ENST00000287916 HFM1A2PYH4 1435 aa10.51□□□□□ -0.73
CLDN12-201ENST00000287916 MYOM3Q5VTT5 1437 aa10.51□□□□□ -0.73
CLDN12-201ENST00000287916 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
CLDN12-201ENST00000287916 PPM1GO15355 546 aaPredicted RBP10.51□□□□□ -0.73
CLDN12-201ENST00000287916 TSPY4P0CV99 314 aa10.51□□□□□ -0.73
CLDN12-201ENST00000287916 TSPY10P0CW01 314 aa10.51□□□□□ -0.73
CLDN12-201ENST00000287916 FRAT2O75474 233 aaPredicted RBP10.5□□□□□ -0.73
CLDN12-201ENST00000287916 NFKBIBQ15653 356 aa10.5□□□□□ -0.73
CLDN12-201ENST00000287916 NBPF1Q3BBV0 1214 aa10.5□□□□□ -0.73
CLDN12-201ENST00000287916 NUP155O75694 1391 aa10.49□□□□□ -0.73
CLDN12-201ENST00000287916 HNRNPMP52272 730 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLDN12-201ENST00000287916 BCL2L13Q9BXK5 485 aa10.49□□□□□ -0.73
CLDN12-201ENST00000287916 BACH2Q9BYV9 841 aa10.48□□□□□ -0.73
CLDN12-201ENST00000287916 PANK3Q9H999 370 aa10.48□□□□□ -0.73
CLDN12-201ENST00000287916 NESP48681 1621 aa10.48□□□□□ -0.73
CLDN12-201ENST00000287916 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
CLDN12-201ENST00000287916 GSE1Q14687 1217 aa10.47□□□□□ -0.73
CLDN12-201ENST00000287916 CASKIN1Q8WXD9 1431 aa10.47□□□□□ -0.73
CLDN12-201ENST00000287916 CLUAP1Q96AJ1 413 aa10.47□□□□□ -0.73
CLDN12-201ENST00000287916 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
CLDN12-201ENST00000287916 ROCK2O75116 1388 aaKnown RBP10.46□□□□□ -0.73
CLDN12-201ENST00000287916 RRP7AQ9Y3A4 280 aaKnown RBP10.46□□□□□ -0.74
CLDN12-201ENST00000287916 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
CLDN12-201ENST00000287916 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
CLDN12-201ENST00000287916 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
CLDN12-201ENST00000287916 MYBBP1AQ9BQG0 1328 aaKnown RBP10.45□□□□□ -0.74
CLDN12-201ENST00000287916 NLRP13Q86W25 1043 aa10.45□□□□□ -0.74
CLDN12-201ENST00000287916 FANCD2Q9BXW9 1451 aa10.44□□□□□ -0.74
CLDN12-201ENST00000287916 KNSTRNQ9Y448 316 aa10.44□□□□□ -0.74
CLDN12-201ENST00000287916 NCOA1Q15788 1441 aa10.44□□□□□ -0.74
CLDN12-201ENST00000287916 SMG6Q86US8 1419 aaKnown RBP10.44□□□□□ -0.74
CLDN12-201ENST00000287916 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
CLDN12-201ENST00000287916 CHMP7Q8WUX9 453 aaPredicted RBP10.43□□□□□ -0.74
CLDN12-201ENST00000287916 KTN1Q86UP2 1357 aaKnown RBP10.43□□□□□ -0.74
CLDN12-201ENST00000287916 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
CLDN12-201ENST00000287916 PTPN23Q9H3S7 1636 aa10.42□□□□□ -0.74
CLDN12-201ENST00000287916 BCAR3O75815 825 aa10.41□□□□□ -0.74
CLDN12-201ENST00000287916 FYCO1Q9BQS8 1478 aa10.41□□□□□ -0.74
CLDN12-201ENST00000287916 NAP1L5Q96NT1 182 aaPredicted RBP10.41□□□□□ -0.74
CLDN12-201ENST00000287916 COG6Q9Y2V7 657 aa10.41□□□□□ -0.74
CLDN12-201ENST00000287916 PLEKHD1A6NEE1 506 aa10.4□□□□□ -0.74
CLDN12-201ENST00000287916 RALBP1Q15311 655 aa10.4□□□□□ -0.74
CLDN12-201ENST00000287916 ANKRD30BQ9BXX2 1392 aa10.4□□□□□ -0.74
CLDN12-201ENST00000287916 APAF1O14727 1248 aa10.4□□□□□ -0.74
CLDN12-201ENST00000287916 BIVM-ERCC5R4GMW8 1640 aa10.4□□□□□ -0.74
CLDN12-201ENST00000287916 KIF15Q9NS87 1388 aa10.4□□□□□ -0.74
CLDN12-201ENST00000287916 ZBTB7CA1YPR0 619 aa10.4□□□□□ -0.75
CLDN12-201ENST00000287916 ARID3AQ99856 593 aa10.39□□□□□ -0.75
CLDN12-201ENST00000287916 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
CLDN12-201ENST00000287916 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.39□□□□□ -0.75
CLDN12-201ENST00000287916 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
CLDN12-201ENST00000287916 TPRNQ4KMQ1 711 aa10.39□□□□□ -0.75
CLDN12-201ENST00000287916 POGKQ9P215 609 aa10.38□□□□□ -0.75
CLDN12-201ENST00000287916 SAFB2Q14151 953 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLDN12-201ENST00000287916 KDM6BO15054 1643 aa10.36□□□□□ -0.75
CLDN12-201ENST00000287916 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
CLDN12-201ENST00000287916 FAM161AQ3B820 660 aa10.36□□□□□ -0.75
CLDN12-201ENST00000287916 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
CLDN12-201ENST00000287916 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
CLDN12-201ENST00000287916 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
CLDN12-201ENST00000287916 UPF2Q9HAU5 1272 aaKnown RBP10.35□□□□□ -0.75
CLDN12-201ENST00000287916 TMF1P82094 1093 aa10.35□□□□□ -0.75
CLDN12-201ENST00000287916 NUTM2DQ5VT03 806 aaPredicted RBP10.34□□□□□ -0.75
CLDN12-201ENST00000287916 PRG4Q92954 1404 aaPredicted RBP10.34□□□□□ -0.75
CLDN12-201ENST00000287916 MFAP1P55081 439 aaKnown RBP10.34□□□□□ -0.75
CLDN12-201ENST00000287916 USP35Q9P2H5 1018 aa10.34□□□□□ -0.75
CLDN12-201ENST00000287916 SEC24BO95487 1268 aa10.32□□□□□ -0.76
CLDN12-201ENST00000287916 MS4A1P11836 297 aa10.32□□□□□ -0.76
CLDN12-201ENST00000287916 GAPVD1Q14C86 1478 aa10.32□□□□□ -0.76
CLDN12-201ENST00000287916 MAP3K1Q13233 1512 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms