RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 TIMELESSQ9UNS1 1208 aa27.64■■■□□ 2.02
VBP1-201ENST00000286428 KDM5BQ9UGL1 1544 aa27.63■■■□□ 2.01
VBP1-201ENST00000286428 RRP7BPQ9NSQ0 103 aa27.62■■■□□ 2.01
VBP1-201ENST00000286428 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
VBP1-201ENST00000286428 ZNF644Q9H582 1327 aaPredicted RBP27.62■■■□□ 2.01
VBP1-201ENST00000286428 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
VBP1-201ENST00000286428 GCC2Q8IWJ2 1684 aa27.6■■■□□ 2.01
VBP1-201ENST00000286428 MAPKBP1O60336 1514 aa27.6■■■□□ 2.01
VBP1-201ENST00000286428 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
VBP1-201ENST00000286428 ZNF316A6NFI3 1004 aaPredicted RBP27.54■■■□□ 2
VBP1-201ENST00000286428 TSPY4P0CV99 314 aa27.53■■■□□ 2
VBP1-201ENST00000286428 TSPY10P0CW01 314 aa27.53■■■□□ 2
VBP1-201ENST00000286428 ANKRD30AQ9BXX3 1397 aa27.52■■■□□ 2
VBP1-201ENST00000286428 ZCCHC11Q5TAX3 1644 aaKnown RBP27.52■■■□□ 2
VBP1-201ENST00000286428 ADGRL2O95490 1459 aa27.51■■□□□ 1.99
VBP1-201ENST00000286428 SHANK2Q9UPX8 1470 aa27.5■■□□□ 1.99
VBP1-201ENST00000286428 TRIM52Q96A61 297 aa27.49■■□□□ 1.99
VBP1-201ENST00000286428 NCOA1Q15788 1441 aa27.48■■□□□ 1.99
VBP1-201ENST00000286428 PREX2Q70Z35 1606 aa27.48■■□□□ 1.99
VBP1-201ENST00000286428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.47■■□□□ 1.99
VBP1-201ENST00000286428 PLEKHH2Q8IVE3 1493 aa27.46■■□□□ 1.99
VBP1-201ENST00000286428 ARHGEF5Q12774 1597 aa27.45■■□□□ 1.99
VBP1-201ENST00000286428 KCNH8Q96L42 1107 aa27.45■■□□□ 1.98
VBP1-201ENST00000286428 ADGBQ8N7X0 1667 aa27.44■■□□□ 1.98
VBP1-201ENST00000286428 NPM1P06748 294 aaKnown RBP eCLIP27.43■■□□□ 1.98
VBP1-201ENST00000286428 CROCC2H7BZ55 1655 aa27.42■■□□□ 1.98
VBP1-201ENST00000286428 ARHGAP5Q13017 1502 aa27.42■■□□□ 1.98
VBP1-201ENST00000286428 PLCH2O75038 1416 aa27.41■■□□□ 1.98
VBP1-201ENST00000286428 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
VBP1-201ENST00000286428 C9orf84Q5VXU9 1444 aa27.4■■□□□ 1.98
VBP1-201ENST00000286428 NEUROD1Q13562 356 aa27.4■■□□□ 1.98
VBP1-201ENST00000286428 EFCAB2Q5VUJ9 269 aa27.4■■□□□ 1.98
VBP1-201ENST00000286428 CCDC141Q6ZP82 1450 aa27.39■■□□□ 1.98
VBP1-201ENST00000286428 MBD5Q9P267 1494 aa27.39■■□□□ 1.97
VBP1-201ENST00000286428 CDC42BPBQ9Y5S2 1711 aa27.38■■□□□ 1.97
VBP1-201ENST00000286428 MPHOSPH9Q99550 1183 aa27.38■■□□□ 1.97
VBP1-201ENST00000286428 TTC37Q6PGP7 1564 aa27.38■■□□□ 1.97
VBP1-201ENST00000286428 MYO5CQ9NQX4 1742 aa27.38■■□□□ 1.97
VBP1-201ENST00000286428 HNRNPMP52272 730 aaKnown RBP eCLIP27.37■■□□□ 1.97
VBP1-201ENST00000286428 SIN3AQ96ST3 1273 aa27.37■■□□□ 1.97
VBP1-201ENST00000286428 WDR7Q9Y4E6 1490 aa27.37■■□□□ 1.97
VBP1-201ENST00000286428 SAMD9LQ8IVG5 1584 aa27.35■■□□□ 1.97
VBP1-201ENST00000286428 ARAP3Q8WWN8 1544 aa27.33■■□□□ 1.97
VBP1-201ENST00000286428 ANKRD50Q9ULJ7 1429 aa27.32■■□□□ 1.96
VBP1-201ENST00000286428 TONSLQ96HA7 1378 aa27.32■■□□□ 1.96
VBP1-201ENST00000286428 DIEXFQ68CQ4 756 aaKnown RBP27.32■■□□□ 1.96
VBP1-201ENST00000286428 KDM6BO15054 1643 aa27.31■■□□□ 1.96
VBP1-201ENST00000286428 SLC4A1APQ9BWU0 796 aaKnown RBP27.27■■□□□ 1.96
VBP1-201ENST00000286428 KIF15Q9NS87 1388 aa27.25■■□□□ 1.95
VBP1-201ENST00000286428 MAST1Q9Y2H9 1570 aa27.25■■□□□ 1.95
VBP1-201ENST00000286428 SYCP2Q9BX26 1530 aa27.24■■□□□ 1.95
VBP1-201ENST00000286428 PPP1R15AO75807 674 aaPredicted RBP27.24■■□□□ 1.95
VBP1-201ENST00000286428 ASXL2Q76L83 1435 aa27.24■■□□□ 1.95
VBP1-201ENST00000286428 ABCA9Q8IUA7 1624 aa27.19■■□□□ 1.94
VBP1-201ENST00000286428 DENND4BO75064 1496 aaPredicted RBP27.18■■□□□ 1.94
VBP1-201ENST00000286428 ABCC1P33527 1531 aa27.16■■□□□ 1.94
VBP1-201ENST00000286428 ANKRD30BQ9BXX2 1392 aa27.15■■□□□ 1.94
VBP1-201ENST00000286428 NUP155O75694 1391 aa27.13■■□□□ 1.93
VBP1-201ENST00000286428 PZPP20742 1482 aa27.13■■□□□ 1.93
VBP1-201ENST00000286428 RTEL1-TNFRSF6BF6WH68 1400 aa27.12■■□□□ 1.93
VBP1-201ENST00000286428 PLXNC1O60486 1568 aa27.12■■□□□ 1.93
VBP1-201ENST00000286428 FANCAO15360 1455 aa27.12■■□□□ 1.93
VBP1-201ENST00000286428 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
VBP1-201ENST00000286428 ARHGEF12Q9NZN5 1544 aa27.09■■□□□ 1.93
VBP1-201ENST00000286428 DUOX2Q9NRD8 1548 aa27.08■■□□□ 1.93
VBP1-201ENST00000286428 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
VBP1-201ENST00000286428 RPRD2Q5VT52 1461 aaKnown RBP27.06■■□□□ 1.92
VBP1-201ENST00000286428 PKD2Q13563 968 aa27.06■■□□□ 1.92
VBP1-201ENST00000286428 ERBINQ96RT1 1412 aa27.06■■□□□ 1.92
VBP1-201ENST00000286428 FOXD1Q16676 465 aa27.04■■□□□ 1.92
VBP1-201ENST00000286428 TRAPPC8Q9Y2L5 1435 aa27.03■■□□□ 1.92
VBP1-201ENST00000286428 CD109Q6YHK3 1445 aa27■■□□□ 1.91
VBP1-201ENST00000286428 ADGRL1O94910 1474 aa27■■□□□ 1.91
VBP1-201ENST00000286428 CFAP74Q9C0B2 1584 aa26.98■■□□□ 1.91
VBP1-201ENST00000286428 SCAPERQ9BY12 1400 aa26.98■■□□□ 1.91
VBP1-201ENST00000286428 CYB5RLQ6IPT4 315 aa26.96■■□□□ 1.91
VBP1-201ENST00000286428 AFAP1Q8N556 730 aa26.96■■□□□ 1.91
VBP1-201ENST00000286428 L3MBTL2Q969R5 705 aa26.95■■□□□ 1.9
VBP1-201ENST00000286428 UNC13BO14795 1591 aa26.93■■□□□ 1.9
VBP1-201ENST00000286428 FAM135AQ9P2D6 1515 aa26.93■■□□□ 1.9
VBP1-201ENST00000286428 ZFYVE16Q7Z3T8 1539 aa26.9■■□□□ 1.9
VBP1-201ENST00000286428 ZNF518AQ6AHZ1 1483 aa26.9■■□□□ 1.9
VBP1-201ENST00000286428 RIMBP3CA6NJZ7 1639 aa26.89■■□□□ 1.9
VBP1-201ENST00000286428 RIMBP3BA6NNM3 1639 aa26.89■■□□□ 1.9
VBP1-201ENST00000286428 RIMBP3Q9UFD9 1639 aa26.89■■□□□ 1.9
VBP1-201ENST00000286428 MYT1LQ9UL68 1186 aa26.89■■□□□ 1.89
VBP1-201ENST00000286428 ATP7AQ04656 1500 aa26.88■■□□□ 1.89
VBP1-201ENST00000286428 NEO1Q92859 1461 aa26.87■■□□□ 1.89
VBP1-201ENST00000286428 MAGI2Q86UL8 1455 aa26.86■■□□□ 1.89
VBP1-201ENST00000286428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.85■■□□□ 1.895e-6■■□□□ 11.4
VBP1-201ENST00000286428 TEX14Q8IWB6 1497 aa26.85■■□□□ 1.89
VBP1-201ENST00000286428 INO80Q9ULG1 1556 aaPredicted RBP26.84■■□□□ 1.89
VBP1-201ENST00000286428 IQGAP3Q86VI3 1631 aa26.84■■□□□ 1.89
VBP1-201ENST00000286428 DHX29Q7Z478 1369 aaKnown RBP26.81■■□□□ 1.88
VBP1-201ENST00000286428 KANK1Q14678 1352 aa26.8■■□□□ 1.88
VBP1-201ENST00000286428 GLI2P10070 1586 aa26.8■■□□□ 1.88
VBP1-201ENST00000286428 EIF4G2P78344 907 aaKnown RBP eCLIP26.78■■□□□ 1.88
VBP1-201ENST00000286428 POGZQ7Z3K3 1410 aa26.77■■□□□ 1.88
VBP1-201ENST00000286428 CCDC144AA2RUR9 1427 aa26.77■■□□□ 1.88
VBP1-201ENST00000286428 MLH3Q9UHC1 1453 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms