RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GPATCH8Q9UKJ3 1502 aaKnown RBP26.32■■□□□ 1.8
PDLIM3-201ENST00000284767 KDM6BO15054 1643 aa26.31■■□□□ 1.8
PDLIM3-201ENST00000284767 DAPK1P53355 1430 aa26.3■■□□□ 1.8
PDLIM3-201ENST00000284767 ADCY10Q96PN6 1610 aa26.29■■□□□ 1.8
PDLIM3-201ENST00000284767 ABCC5O15440 1437 aa26.29■■□□□ 1.8
PDLIM3-201ENST00000284767 UACAQ9BZF9 1416 aa26.29■■□□□ 1.8
PDLIM3-201ENST00000284767 CAMSAP2Q08AD1 1489 aa26.25■■□□□ 1.79
PDLIM3-201ENST00000284767 CLASP1Q7Z460 1538 aa26.25■■□□□ 1.79
PDLIM3-201ENST00000284767 DNMT1P26358 1616 aaKnown RBP26.24■■□□□ 1.79
PDLIM3-201ENST00000284767 GCC2Q8IWJ2 1684 aa26.24■■□□□ 1.79
PDLIM3-201ENST00000284767 ITSN2Q9NZM3 1697 aa26.22■■□□□ 1.79
PDLIM3-201ENST00000284767 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
PDLIM3-201ENST00000284767 ABCC10Q5T3U5 1492 aa26.22■■□□□ 1.79
PDLIM3-201ENST00000284767 AKNAQ7Z591 1439 aa26.2■■□□□ 1.78
PDLIM3-201ENST00000284767 CDC42BPAQ5VT25 1732 aa26.19■■□□□ 1.78
PDLIM3-201ENST00000284767 DENND4BO75064 1496 aaPredicted RBP26.14■■□□□ 1.77
PDLIM3-201ENST00000284767 ROCK1Q13464 1354 aa26.13■■□□□ 1.77
PDLIM3-201ENST00000284767 ABCC2Q92887 1545 aa26.13■■□□□ 1.77
PDLIM3-201ENST00000284767 SUPT16HQ9Y5B9 1047 aaKnown RBP26.12■■□□□ 1.77
PDLIM3-201ENST00000284767 FOXD1Q16676 465 aa26.1■■□□□ 1.77
PDLIM3-201ENST00000284767 KCNH8Q96L42 1107 aa26.07■■□□□ 1.76
PDLIM3-201ENST00000284767 MPHOSPH9Q99550 1183 aa26.07■■□□□ 1.76
PDLIM3-201ENST00000284767 HNRNPMP52272 730 aaKnown RBP eCLIP26.06■■□□□ 1.76
PDLIM3-201ENST00000284767 NCOA1Q15788 1441 aa26.05■■□□□ 1.76
PDLIM3-201ENST00000284767 PPP1R15AO75807 674 aaPredicted RBP26.03■■□□□ 1.76
PDLIM3-201ENST00000284767 TONSLQ96HA7 1378 aa26.03■■□□□ 1.76
PDLIM3-201ENST00000284767 CROCC2H7BZ55 1655 aa26.03■■□□□ 1.76
PDLIM3-201ENST00000284767 TTC37Q6PGP7 1564 aa26.02■■□□□ 1.76
PDLIM3-201ENST00000284767 TIMELESSQ9UNS1 1208 aa26.01■■□□□ 1.75
PDLIM3-201ENST00000284767 CDC42BPBQ9Y5S2 1711 aa26.01■■□□□ 1.75
PDLIM3-201ENST00000284767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.99■■□□□ 1.75
PDLIM3-201ENST00000284767 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
PDLIM3-201ENST00000284767 ZCCHC11Q5TAX3 1644 aaKnown RBP25.98■■□□□ 1.75
PDLIM3-201ENST00000284767 PREX2Q70Z35 1606 aa25.97■■□□□ 1.75
PDLIM3-201ENST00000284767 SAMD9LQ8IVG5 1584 aa25.97■■□□□ 1.75
PDLIM3-201ENST00000284767 ADGRL2O95490 1459 aa25.96■■□□□ 1.75
PDLIM3-201ENST00000284767 C9orf84Q5VXU9 1444 aa25.96■■□□□ 1.75
PDLIM3-201ENST00000284767 ANKRD30AQ9BXX3 1397 aa25.95■■□□□ 1.75
PDLIM3-201ENST00000284767 HIRIP3Q9BW71 556 aaPredicted RBP25.95■■□□□ 1.74
PDLIM3-201ENST00000284767 SLC4A1APQ9BWU0 796 aaKnown RBP25.95■■□□□ 1.74
PDLIM3-201ENST00000284767 MBD5Q9P267 1494 aa25.94■■□□□ 1.74
PDLIM3-201ENST00000284767 TSPY4P0CV99 314 aa25.93■■□□□ 1.74
PDLIM3-201ENST00000284767 TSPY10P0CW01 314 aa25.93■■□□□ 1.74
PDLIM3-201ENST00000284767 UHRF1BP1LA0JNW5 1464 aa25.93■■□□□ 1.74
PDLIM3-201ENST00000284767 KDM5BQ9UGL1 1544 aa25.93■■□□□ 1.74
PDLIM3-201ENST00000284767 ARHGAP5Q13017 1502 aa25.92■■□□□ 1.74
PDLIM3-201ENST00000284767 ANKRD50Q9ULJ7 1429 aa25.89■■□□□ 1.74
PDLIM3-201ENST00000284767 SYCP2Q9BX26 1530 aa25.88■■□□□ 1.73
PDLIM3-201ENST00000284767 PZPP20742 1482 aa25.88■■□□□ 1.73
PDLIM3-201ENST00000284767 SHANK2Q9UPX8 1470 aa25.88■■□□□ 1.73
PDLIM3-201ENST00000284767 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
PDLIM3-201ENST00000284767 ARHGEF5Q12774 1597 aa25.85■■□□□ 1.73
PDLIM3-201ENST00000284767 ANKRD30BQ9BXX2 1392 aa25.85■■□□□ 1.73
PDLIM3-201ENST00000284767 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
PDLIM3-201ENST00000284767 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
PDLIM3-201ENST00000284767 KIF15Q9NS87 1388 aa25.84■■□□□ 1.73
PDLIM3-201ENST00000284767 L3MBTL2Q969R5 705 aa25.8■■□□□ 1.72
PDLIM3-201ENST00000284767 TSHZ2Q9NRE2 1034 aa25.8■■□□□ 1.72
PDLIM3-201ENST00000284767 ARHGEF12Q9NZN5 1544 aa25.79■■□□□ 1.72
PDLIM3-201ENST00000284767 PKD2Q13563 968 aa25.78■■□□□ 1.72
PDLIM3-201ENST00000284767 PLCH2O75038 1416 aa25.78■■□□□ 1.72
PDLIM3-201ENST00000284767 NUP155O75694 1391 aa25.77■■□□□ 1.72
PDLIM3-201ENST00000284767 RPRD2Q5VT52 1461 aaKnown RBP25.74■■□□□ 1.71
PDLIM3-201ENST00000284767 RSPH4AQ5TD94 716 aa25.73■■□□□ 1.71
PDLIM3-201ENST00000284767 DDX10Q13206 875 aaKnown RBP25.72■■□□□ 1.71
PDLIM3-201ENST00000284767 EFCAB2Q5VUJ9 269 aa25.72■■□□□ 1.71
PDLIM3-201ENST00000284767 WDR7Q9Y4E6 1490 aa25.71■■□□□ 1.71
PDLIM3-201ENST00000284767 KIAA1107Q9UPP5 1409 aa25.7■■□□□ 1.71
PDLIM3-201ENST00000284767 TRAPPC8Q9Y2L5 1435 aa25.67■■□□□ 1.7
PDLIM3-201ENST00000284767 PLEKHH2Q8IVE3 1493 aa25.66■■□□□ 1.7
PDLIM3-201ENST00000284767 TEX14Q8IWB6 1497 aa25.66■■□□□ 1.7
PDLIM3-201ENST00000284767 ASXL2Q76L83 1435 aa25.65■■□□□ 1.7
PDLIM3-201ENST00000284767 NBPF8Q3BBV2 869 aa25.65■■□□□ 1.7
PDLIM3-201ENST00000284767 ABCC1P33527 1531 aa25.64■■□□□ 1.7
PDLIM3-201ENST00000284767 MAST1Q9Y2H9 1570 aa25.63■■□□□ 1.69
PDLIM3-201ENST00000284767 AFAP1Q8N556 730 aa25.63■■□□□ 1.69
PDLIM3-201ENST00000284767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.63■■□□□ 1.69
PDLIM3-201ENST00000284767 KDM5DQ9BY66 1539 aa25.6■■□□□ 1.69
PDLIM3-201ENST00000284767 CCER2I3L3R5 266 aa25.6■■□□□ 1.69
PDLIM3-201ENST00000284767 HSPA5P11021 654 aaKnown RBP25.58■■□□□ 1.69
PDLIM3-201ENST00000284767 FAM135AQ9P2D6 1515 aa25.56■■□□□ 1.68
PDLIM3-201ENST00000284767 PLXNC1O60486 1568 aa25.56■■□□□ 1.68
PDLIM3-201ENST00000284767 ANP32EQ9BTT0 268 aa25.56■■□□□ 1.68
PDLIM3-201ENST00000284767 FANCAO15360 1455 aa25.56■■□□□ 1.68
PDLIM3-201ENST00000284767 NPM1P06748 294 aaKnown RBP eCLIP25.55■■□□□ 1.68
PDLIM3-201ENST00000284767 ABCA9Q8IUA7 1624 aa25.55■■□□□ 1.68
PDLIM3-201ENST00000284767 FKBP8Q14318 412 aa25.53■■□□□ 1.68
PDLIM3-201ENST00000284767 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
PDLIM3-201ENST00000284767 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
PDLIM3-201ENST00000284767 ARAP3Q8WWN8 1544 aa25.51■■□□□ 1.67
PDLIM3-201ENST00000284767 DUOX2Q9NRD8 1548 aa25.5■■□□□ 1.67
PDLIM3-201ENST00000284767 EIF4G2P78344 907 aaKnown RBP eCLIP25.5■■□□□ 1.67
PDLIM3-201ENST00000284767 ANP32CO43423 234 aa25.49■■□□□ 1.67
PDLIM3-201ENST00000284767 UNC13BO14795 1591 aa25.48■■□□□ 1.67
PDLIM3-201ENST00000284767 NEFLP07196 543 aa25.48■■□□□ 1.67
PDLIM3-201ENST00000284767 SCAPERQ9BY12 1400 aa25.46■■□□□ 1.67
PDLIM3-201ENST00000284767 BCANQ96GW7 911 aa25.46■■□□□ 1.67
PDLIM3-201ENST00000284767 ADGRL1O94910 1474 aa25.46■■□□□ 1.67
PDLIM3-201ENST00000284767 ZFYVE16Q7Z3T8 1539 aa25.45■■□□□ 1.66
PDLIM3-201ENST00000284767 MYT1LQ9UL68 1186 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms