RNA–Protein interactions for RNA: ENST00000284551.10

TRIM11-201, Transcript of tripartite motif containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM11, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-201ENST00000284551 ZNF777Q9ULD5 760 aaPredicted RBP23.46■■□□□ 1.35
TRIM11-201ENST00000284551 ABCC5O15440 1437 aa23.46■■□□□ 1.35
TRIM11-201ENST00000284551 DAPK1P53355 1430 aa23.45■■□□□ 1.34
TRIM11-201ENST00000284551 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
TRIM11-201ENST00000284551 RAPGEF6Q8TEU7 1601 aa23.43■■□□□ 1.34
TRIM11-201ENST00000284551 WASHC2AQ641Q2 1341 aa23.41■■□□□ 1.34
TRIM11-201ENST00000284551 C11orf95C9JLR9 678 aaPredicted RBP23.39■■□□□ 1.34
TRIM11-201ENST00000284551 NBPF8Q3BBV2 869 aa23.38■■□□□ 1.33
TRIM11-201ENST00000284551 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
TRIM11-201ENST00000284551 AKNAQ7Z591 1439 aa23.36■■□□□ 1.33
TRIM11-201ENST00000284551 KIF14Q15058 1648 aa23.36■■□□□ 1.33
TRIM11-201ENST00000284551 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
TRIM11-201ENST00000284551 CFDP1Q9UEE9 299 aaPredicted RBP23.36■■□□□ 1.33
TRIM11-201ENST00000284551 FKBP8Q14318 412 aa23.34■■□□□ 1.33
TRIM11-201ENST00000284551 DNMT1P26358 1616 aaKnown RBP23.34■■□□□ 1.33
TRIM11-201ENST00000284551 CCER2I3L3R5 266 aa23.33■■□□□ 1.33
TRIM11-201ENST00000284551 CDK11AQ9UQ88 783 aaPredicted RBP23.32■■□□□ 1.32
TRIM11-201ENST00000284551 ANKRD30BQ9BXX2 1392 aa23.32■■□□□ 1.32
TRIM11-201ENST00000284551 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
TRIM11-201ENST00000284551 CCDC184Q52MB2 194 aa23.31■■□□□ 1.32
TRIM11-201ENST00000284551 TROQ12816 1431 aaPredicted RBP23.3■■□□□ 1.32
TRIM11-201ENST00000284551 CAMSAP2Q08AD1 1489 aa23.29■■□□□ 1.32
TRIM11-201ENST00000284551 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
TRIM11-201ENST00000284551 GPATCH8Q9UKJ3 1502 aaKnown RBP23.28■■□□□ 1.32
TRIM11-201ENST00000284551 EIF4G2P78344 907 aaKnown RBP eCLIP23.28■■□□□ 1.32
TRIM11-201ENST00000284551 ROCK1Q13464 1354 aa23.27■■□□□ 1.32
TRIM11-201ENST00000284551 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
TRIM11-201ENST00000284551 ZNF326Q5BKZ1 582 aaKnown RBP23.23■■□□□ 1.31
TRIM11-201ENST00000284551 PZPP20742 1482 aa23.22■■□□□ 1.31
TRIM11-201ENST00000284551 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
TRIM11-201ENST00000284551 NCOA1Q15788 1441 aa23.22■■□□□ 1.31
TRIM11-201ENST00000284551 TEX14Q8IWB6 1497 aa23.22■■□□□ 1.31
TRIM11-201ENST00000284551 NUP160Q12769 1436 aa23.21■■□□□ 1.31
TRIM11-201ENST00000284551 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRIM11-201ENST00000284551 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
TRIM11-201ENST00000284551 CARMIL2Q6F5E8 1435 aa23.17■■□□□ 1.3
TRIM11-201ENST00000284551 PKD2Q13563 968 aa23.17■■□□□ 1.3
TRIM11-201ENST00000284551 ATP10BO94823 1461 aa23.15■■□□□ 1.3
TRIM11-201ENST00000284551 PLEKHD1A6NEE1 506 aa23.15■■□□□ 1.3
TRIM11-201ENST00000284551 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
TRIM11-201ENST00000284551 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.34e-8■■■■□ 21.3
TRIM11-201ENST00000284551 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.3
TRIM11-201ENST00000284551 POLR3GLQ9BT43 218 aa23.12■■□□□ 1.29
TRIM11-201ENST00000284551 KIF7Q2M1P5 1343 aa23.11■■□□□ 1.29
TRIM11-201ENST00000284551 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
TRIM11-201ENST00000284551 ITSN2Q9NZM3 1697 aa23.1■■□□□ 1.29
TRIM11-201ENST00000284551 CDC42BPAQ5VT25 1732 aa23.1■■□□□ 1.29
TRIM11-201ENST00000284551 ABCA8O94911 1581 aa23.09■■□□□ 1.29
TRIM11-201ENST00000284551 ADCY10Q96PN6 1610 aa23.08■■□□□ 1.29
TRIM11-201ENST00000284551 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.29
TRIM11-201ENST00000284551 SENP3-EIF4A1A0A087X0R7 540 aa23.08■■□□□ 1.28
TRIM11-201ENST00000284551 ANKRD50Q9ULJ7 1429 aa23.07■■□□□ 1.28
TRIM11-201ENST00000284551 SPATA31E1Q6ZUB1 1445 aa23.07■■□□□ 1.28
TRIM11-201ENST00000284551 ABCC10Q5T3U5 1492 aa23.07■■□□□ 1.28
TRIM11-201ENST00000284551 PRKRIP1Q9H875 184 aaPredicted RBP23.06■■□□□ 1.28
TRIM11-201ENST00000284551 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
TRIM11-201ENST00000284551 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
TRIM11-201ENST00000284551 ANKRD30AQ9BXX3 1397 aa23.06■■□□□ 1.28
TRIM11-201ENST00000284551 KIAA1107Q9UPP5 1409 aa23.05■■□□□ 1.28
TRIM11-201ENST00000284551 NUP155O75694 1391 aa23.04■■□□□ 1.28
TRIM11-201ENST00000284551 NEFLP07196 543 aa23.03■■□□□ 1.28
TRIM11-201ENST00000284551 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
TRIM11-201ENST00000284551 C9orf84Q5VXU9 1444 aa23.03■■□□□ 1.28
TRIM11-201ENST00000284551 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
TRIM11-201ENST00000284551 MRS2Q9HD23 443 aa23■■□□□ 1.27
TRIM11-201ENST00000284551 PTPRGP23470 1445 aa23■■□□□ 1.27
TRIM11-201ENST00000284551 BCORL1Q5H9F3 1711 aa22.98■■□□□ 1.27
TRIM11-201ENST00000284551 TSPY4P0CV99 314 aa22.97■■□□□ 1.27
TRIM11-201ENST00000284551 TSPY10P0CW01 314 aa22.97■■□□□ 1.27
TRIM11-201ENST00000284551 MBD5Q9P267 1494 aa22.97■■□□□ 1.27
TRIM11-201ENST00000284551 USP47Q96K76 1375 aa22.96■■□□□ 1.27
TRIM11-201ENST00000284551 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
TRIM11-201ENST00000284551 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
TRIM11-201ENST00000284551 CHD1O14646 1710 aa22.9■■□□□ 1.26
TRIM11-201ENST00000284551 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.26
TRIM11-201ENST00000284551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.26
TRIM11-201ENST00000284551 SAMD9LQ8IVG5 1584 aa22.89■■□□□ 1.26
TRIM11-201ENST00000284551 CDC42BPBQ9Y5S2 1711 aa22.89■■□□□ 1.25
TRIM11-201ENST00000284551 ANP32EQ9BTT0 268 aa22.88■■□□□ 1.25
TRIM11-201ENST00000284551 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
TRIM11-201ENST00000284551 CARD11Q9BXL7 1154 aa22.87■■□□□ 1.25
TRIM11-201ENST00000284551 RGL3Q3MIN7 710 aa22.86■■□□□ 1.25
TRIM11-201ENST00000284551 SHANK2Q9UPX8 1470 aa22.84■■□□□ 1.25
TRIM11-201ENST00000284551 ST20-MTHFSA0A0A6YYL1 179 aa22.84■■□□□ 1.25
TRIM11-201ENST00000284551 BCL11AQ9H165 835 aa22.84■■□□□ 1.25
TRIM11-201ENST00000284551 KDM5CP41229 1560 aa22.84■■□□□ 1.25
TRIM11-201ENST00000284551 POLR1AO95602 1720 aaPredicted RBP22.83■■□□□ 1.24
TRIM11-201ENST00000284551 TTC37Q6PGP7 1564 aa22.83■■□□□ 1.24
TRIM11-201ENST00000284551 SYCP2Q9BX26 1530 aa22.82■■□□□ 1.24
TRIM11-201ENST00000284551 CCDC141Q6ZP82 1450 aa22.79■■□□□ 1.24
TRIM11-201ENST00000284551 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.24
TRIM11-201ENST00000284551 PREX2Q70Z35 1606 aa22.77■■□□□ 1.24
TRIM11-201ENST00000284551 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
TRIM11-201ENST00000284551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.76■■□□□ 1.233e-6■■□□□ 12.2
TRIM11-201ENST00000284551 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
TRIM11-201ENST00000284551 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
TRIM11-201ENST00000284551 RBM19Q9Y4C8 960 aaKnown RBP22.75■■□□□ 1.23
TRIM11-201ENST00000284551 RALGAPBQ86X10 1494 aa22.75■■□□□ 1.23
TRIM11-201ENST00000284551 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
TRIM11-201ENST00000284551 KDM5DQ9BY66 1539 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms