RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 HSP90AB1P08238 724 aaKnown RBP5.15□□□□□ -1.59
SCN3A-201ENST00000283254 NEUROD2Q15784 382 aa5.14□□□□□ -1.59
SCN3A-201ENST00000283254 MORC1Q86VD1 984 aa5.14□□□□□ -1.59
SCN3A-201ENST00000283254 NOC3LQ8WTT2 800 aaKnown RBP5.14□□□□□ -1.59
SCN3A-201ENST00000283254 SYAP1Q96A49 352 aaPredicted RBP5.14□□□□□ -1.59
SCN3A-201ENST00000283254 FRAT1Q92837 279 aaPredicted RBP5.14□□□□□ -1.59
SCN3A-201ENST00000283254 BAZ1AQ9NRL2 1556 aaPredicted RBP5.14□□□□□ -1.59
SCN3A-201ENST00000283254 EID1Q9Y6B2 187 aa5.14□□□□□ -1.59
SCN3A-201ENST00000283254 LMOD3Q0VAK6 560 aa5.14□□□□□ -1.59
SCN3A-201ENST00000283254 KTN1Q86UP2 1357 aaKnown RBP5.14□□□□□ -1.59
SCN3A-201ENST00000283254 TERF2IPQ9NYB0 399 aa5.14□□□□□ -1.59
SCN3A-201ENST00000283254 TNIKQ9UKE5 1360 aa5.13□□□□□ -1.59
SCN3A-201ENST00000283254 WASHC2AQ641Q2 1341 aa5.13□□□□□ -1.59
SCN3A-201ENST00000283254 TPM4P67936 248 aa5.13□□□□□ -1.59
SCN3A-201ENST00000283254 GORABQ5T7V8 394 aa5.13□□□□□ -1.59
SCN3A-201ENST00000283254 FMN1Q68DA7 1419 aa5.13□□□□□ -1.59
SCN3A-201ENST00000283254 PDS5BQ9NTI5 1447 aa5.13□□□□□ -1.59
SCN3A-201ENST00000283254 EFCAB2Q5VUJ9 269 aa5.12□□□□□ -1.59
SCN3A-201ENST00000283254 RGS3P49796 1198 aa5.12□□□□□ -1.59
SCN3A-201ENST00000283254 PLCB2Q00722 1185 aa5.12□□□□□ -1.59
SCN3A-201ENST00000283254 CEP89Q96ST8 783 aa5.12□□□□□ -1.59
SCN3A-201ENST00000283254 G3V3G9 751 aa5.12□□□□□ -1.59
SCN3A-201ENST00000283254 DCAF8Q5TAQ9 597 aa5.12□□□□□ -1.59
SCN3A-201ENST00000283254 EIF4G1Q04637 1599 aaKnown RBP5.11□□□□□ -1.59
SCN3A-201ENST00000283254 ARHGAP35Q9NRY4 1499 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 GBP4Q96PP9 640 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 SENP3Q9H4L4 574 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-201ENST00000283254 LRRFIP1Q32MZ4 808 aaKnown RBP5.11□□□□□ -1.59
SCN3A-201ENST00000283254 WWC1Q8IX03 1113 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 CSPP1Q1MSJ5 1256 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 RSPH4AQ5TD94 716 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 PPP4R2Q9NY27 417 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 NCBP3Q53F19 620 aaKnown RBP5.11□□□□□ -1.59
SCN3A-201ENST00000283254 RASSF8Q8NHQ8 419 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 ANKRD30AQ9BXX3 1397 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 GTF2E1P29083 439 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-201ENST00000283254 PRM3Q9NNZ6 103 aa5.11□□□□□ -1.59
SCN3A-201ENST00000283254 MSNP26038 577 aaKnown RBP5.1□□□□□ -1.59
SCN3A-201ENST00000283254 DRC7Q8IY82 874 aa5.1□□□□□ -1.59
SCN3A-201ENST00000283254 UACAQ9BZF9 1416 aa5.1□□□□□ -1.59
SCN3A-201ENST00000283254 MLECQ14165 292 aa5.1□□□□□ -1.59
SCN3A-201ENST00000283254 KRI1Q8N9T8 703 aaKnown RBP5.1□□□□□ -1.59
SCN3A-201ENST00000283254 RWDD1Q9H446 243 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-201ENST00000283254 ROCK2O75116 1388 aaKnown RBP5.1□□□□□ -1.59
SCN3A-201ENST00000283254 ZNF330Q9Y3S2 320 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-201ENST00000283254 TAF7LQ5H9L4 462 aa5.09□□□□□ -1.59
SCN3A-201ENST00000283254 CCDC9Q9Y3X0 531 aaKnown RBP5.09□□□□□ -1.59
SCN3A-201ENST00000283254 PHLDB1Q86UU1 1377 aa5.09□□□□□ -1.59
SCN3A-201ENST00000283254 DCAF11Q8TEB1 546 aa5.09□□□□□ -1.59
SCN3A-201ENST00000283254 TPM3P06753 285 aa5.09□□□□□ -1.59
SCN3A-201ENST00000283254 RALBP1Q15311 655 aa5.09□□□□□ -1.59
SCN3A-201ENST00000283254 CARMIL1Q5VZK9 1371 aa5.09□□□□□ -1.59
SCN3A-201ENST00000283254 TCEAL9Q9UHQ7 104 aa5.09□□□□□ -1.6
SCN3A-201ENST00000283254 TAOK2Q9UL54 1235 aa5.09□□□□□ -1.6
SCN3A-201ENST00000283254 PAK3O75914 559 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-201ENST00000283254 GOLGA6L1Q8N7Z2 621 aa5.08□□□□□ -1.6
SCN3A-201ENST00000283254 SMARCA2P51531 1590 aa5.08□□□□□ -1.6
SCN3A-201ENST00000283254 AEBP2Q6ZN18 517 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-201ENST00000283254 AMOTL1Q8IY63 956 aa5.08□□□□□ -1.6
SCN3A-201ENST00000283254 CUX2O14529 1486 aa5.08□□□□□ -1.6
SCN3A-201ENST00000283254 DCAF8L1A6NGE4 600 aa5.08□□□□□ -1.6
SCN3A-201ENST00000283254 CCDC18Q5T9S5 1454 aa5.08□□□□□ -1.6
SCN3A-201ENST00000283254 A0A0U1RQG5 324 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-201ENST00000283254 PHF14O94880 888 aa5.08□□□□□ -1.6
SCN3A-201ENST00000283254 NAP1L5Q96NT1 182 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-201ENST00000283254 U2AF1L5P0DN76 240 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-201ENST00000283254 U2AF1Q01081 240 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN3A-201ENST00000283254 GGT6Q6P531 493 aa5.07□□□□□ -1.6
SCN3A-201ENST00000283254 ATP6V1DQ9Y5K8 247 aa5.07□□□□□ -1.6
SCN3A-201ENST00000283254 NOL10Q9BSC4 688 aaKnown RBP5.07□□□□□ -1.6
SCN3A-201ENST00000283254 TCERG1O14776 1098 aaKnown RBP5.07□□□□□ -1.6
SCN3A-201ENST00000283254 SOX12O15370 315 aa5.07□□□□□ -1.6
SCN3A-201ENST00000283254 FRAT2O75474 233 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-201ENST00000283254 TPRNQ4KMQ1 711 aa5.07□□□□□ -1.6
SCN3A-201ENST00000283254 FOXD1Q16676 465 aa5.07□□□□□ -1.6
SCN3A-201ENST00000283254 CC2D1BQ5T0F9 858 aaKnown RBP5.07□□□□□ -1.6
SCN3A-201ENST00000283254 HMGB2P26583 209 aaKnown RBP5.07□□□□□ -1.6
SCN3A-201ENST00000283254 IRX6P78412 446 aaPredicted RBP5.06□□□□□ -1.6
SCN3A-201ENST00000283254 SMC4Q9NTJ3 1288 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 MARCH6O60337 910 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 NGDNQ8NEJ9 315 aaKnown RBP5.06□□□□□ -1.6
SCN3A-201ENST00000283254 CHMP3Q9Y3E7 222 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 KIF16BQ96L93 1317 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 ITPRIPQ8IWB1 547 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 TRIM34Q9BYJ4 488 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 NUP155O75694 1391 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 CCER2I3L3R5 266 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 HSP90B1P14625 803 aaKnown RBP5.06□□□□□ -1.6
SCN3A-201ENST00000283254 VPS53Q5VIR6 699 aa5.06□□□□□ -1.6
SCN3A-201ENST00000283254 TPM1P09493 284 aa5.05□□□□□ -1.6
SCN3A-201ENST00000283254 NOP58Q9Y2X3 529 aaKnown RBP5.05□□□□□ -1.6
SCN3A-201ENST00000283254 NEXNQ0ZGT2 675 aa5.05□□□□□ -1.6
SCN3A-201ENST00000283254 CPLX2Q6PUV4 134 aaKnown RBP5.05□□□□□ -1.6
SCN3A-201ENST00000283254 CTDP1Q9Y5B0 961 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-201ENST00000283254 TPM2P07951 284 aa5.05□□□□□ -1.6
SCN3A-201ENST00000283254 IPO7O95373 1038 aaKnown RBP5.05□□□□□ -1.6
SCN3A-201ENST00000283254 TSR1Q2NL82 804 aaKnown RBP5.05□□□□□ -1.6
SCN3A-201ENST00000283254 PKD2Q13563 968 aa5.05□□□□□ -1.6
SCN3A-201ENST00000283254 SAFB2Q14151 953 aaKnown RBP eCLIP5.05□□□□□ -1.6
SCN3A-201ENST00000283254 CCDC70Q6NSX1 233 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms