RNA–Protein interactions for RNA: ENST00000278947.5

SCN2B-201, Transcript of sodium voltage-gated channel beta subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN2B, Length 5,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2B-201ENST00000278947 MIER1Q8N108 512 aa17.23■□□□□ 0.35
SCN2B-201ENST00000278947 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
SCN2B-201ENST00000278947 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
SCN2B-201ENST00000278947 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
SCN2B-201ENST00000278947 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
SCN2B-201ENST00000278947 PKD2Q13563 968 aa17.19■□□□□ 0.34
SCN2B-201ENST00000278947 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
SCN2B-201ENST00000278947 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
SCN2B-201ENST00000278947 NUP155O75694 1391 aa17.19■□□□□ 0.34
SCN2B-201ENST00000278947 NPHP1O15259 732 aa17.18■□□□□ 0.34
SCN2B-201ENST00000278947 HNRNPMP52272 730 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCN2B-201ENST00000278947 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
SCN2B-201ENST00000278947 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
SCN2B-201ENST00000278947 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
SCN2B-201ENST00000278947 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
SCN2B-201ENST00000278947 FAM69CQ0P6D2 419 aa17.16■□□□□ 0.34
SCN2B-201ENST00000278947 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
SCN2B-201ENST00000278947 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
SCN2B-201ENST00000278947 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
SCN2B-201ENST00000278947 STK26Q9P289 416 aa17.13■□□□□ 0.33
SCN2B-201ENST00000278947 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
SCN2B-201ENST00000278947 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
SCN2B-201ENST00000278947 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCN2B-201ENST00000278947 CFTRP13569 1480 aa17.08■□□□□ 0.32
SCN2B-201ENST00000278947 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCN2B-201ENST00000278947 UACAQ9BZF9 1416 aa17.07■□□□□ 0.32
SCN2B-201ENST00000278947 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
SCN2B-201ENST00000278947 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
SCN2B-201ENST00000278947 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
SCN2B-201ENST00000278947 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
SCN2B-201ENST00000278947 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
SCN2B-201ENST00000278947 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
SCN2B-201ENST00000278947 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
SCN2B-201ENST00000278947 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
SCN2B-201ENST00000278947 IGF1RP08069 1367 aa17.04■□□□□ 0.32
SCN2B-201ENST00000278947 ZRSR1Q15695 479 aaKnown RBP17.02■□□□□ 0.31
SCN2B-201ENST00000278947 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
SCN2B-201ENST00000278947 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
SCN2B-201ENST00000278947 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
SCN2B-201ENST00000278947 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
SCN2B-201ENST00000278947 SOX12O15370 315 aa17■□□□□ 0.31
SCN2B-201ENST00000278947 RTF1Q92541 710 aaKnown RBP17■□□□□ 0.31
SCN2B-201ENST00000278947 MS4A1P11836 297 aa16.99■□□□□ 0.31
SCN2B-201ENST00000278947 MSNP26038 577 aaKnown RBP16.99■□□□□ 0.31
SCN2B-201ENST00000278947 TERF2IPQ9NYB0 399 aa16.99■□□□□ 0.31
SCN2B-201ENST00000278947 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
SCN2B-201ENST00000278947 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
SCN2B-201ENST00000278947 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
SCN2B-201ENST00000278947 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
SCN2B-201ENST00000278947 NESP48681 1621 aa16.98■□□□□ 0.31
SCN2B-201ENST00000278947 SUPT16HQ9Y5B9 1047 aaKnown RBP16.97■□□□□ 0.31
SCN2B-201ENST00000278947 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCN2B-201ENST00000278947 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
SCN2B-201ENST00000278947 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
SCN2B-201ENST00000278947 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
SCN2B-201ENST00000278947 VGFO15240 615 aaPredicted RBP16.96■□□□□ 0.31
SCN2B-201ENST00000278947 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
SCN2B-201ENST00000278947 TNNT3P45378 269 aaPredicted RBP16.95■□□□□ 0.3
SCN2B-201ENST00000278947 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
SCN2B-201ENST00000278947 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
SCN2B-201ENST00000278947 ARID3AQ99856 593 aa16.93■□□□□ 0.3
SCN2B-201ENST00000278947 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
SCN2B-201ENST00000278947 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
SCN2B-201ENST00000278947 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
SCN2B-201ENST00000278947 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
SCN2B-201ENST00000278947 PPP4R2Q9NY27 417 aa16.92■□□□□ 0.3
SCN2B-201ENST00000278947 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
SCN2B-201ENST00000278947 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
SCN2B-201ENST00000278947 CUX1P39880 1505 aa16.9■□□□□ 0.3
SCN2B-201ENST00000278947 GOLGA6L6A8MZA4 724 aa16.9■□□□□ 0.3
SCN2B-201ENST00000278947 GOLGA2Q08379 1002 aa16.9■□□□□ 0.3
SCN2B-201ENST00000278947 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
SCN2B-201ENST00000278947 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
SCN2B-201ENST00000278947 FOXD1Q16676 465 aa16.89■□□□□ 0.29
SCN2B-201ENST00000278947 TMX4Q9H1E5 349 aaPredicted RBP16.89■□□□□ 0.29
SCN2B-201ENST00000278947 KTN1Q86UP2 1357 aaKnown RBP16.89■□□□□ 0.29
SCN2B-201ENST00000278947 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
SCN2B-201ENST00000278947 RBM19Q9Y4C8 960 aaKnown RBP16.88■□□□□ 0.29
SCN2B-201ENST00000278947 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
SCN2B-201ENST00000278947 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
SCN2B-201ENST00000278947 NRDCO43847 1150 aa16.84■□□□□ 0.29
SCN2B-201ENST00000278947 ARHGAP5Q13017 1502 aa16.84■□□□□ 0.29
SCN2B-201ENST00000278947 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.29
SCN2B-201ENST00000278947 HSPA5P11021 654 aaKnown RBP16.83■□□□□ 0.29
SCN2B-201ENST00000278947 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
SCN2B-201ENST00000278947 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
SCN2B-201ENST00000278947 POGZQ7Z3K3 1410 aa16.82■□□□□ 0.28
SCN2B-201ENST00000278947 AMPHP49418 695 aa16.82■□□□□ 0.28
SCN2B-201ENST00000278947 RGS3P49796 1198 aa16.82■□□□□ 0.28
SCN2B-201ENST00000278947 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
SCN2B-201ENST00000278947 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
SCN2B-201ENST00000278947 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
SCN2B-201ENST00000278947 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
SCN2B-201ENST00000278947 RALBP1Q15311 655 aa16.79■□□□□ 0.28
SCN2B-201ENST00000278947 CASKIN1Q8WXD9 1431 aa16.78■□□□□ 0.28
SCN2B-201ENST00000278947 HSP90AA2PQ14568 343 aaPredicted RBP16.78■□□□□ 0.28
SCN2B-201ENST00000278947 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
SCN2B-201ENST00000278947 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
SCN2B-201ENST00000278947 EVA1CP58658 441 aa16.78■□□□□ 0.28
SCN2B-201ENST00000278947 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms