RNA–Protein interactions for RNA: ENST00000275300.2

SLC22A3-201, Transcript of solute carrier family 22 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A3, Length 3,348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A3-201ENST00000275300 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
SLC22A3-201ENST00000275300 SUPT6HQ7KZ85 1726 aaKnown RBP23.5■■□□□ 1.35
SLC22A3-201ENST00000275300 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
SLC22A3-201ENST00000275300 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
SLC22A3-201ENST00000275300 KDM5BQ9UGL1 1544 aa23.49■■□□□ 1.35
SLC22A3-201ENST00000275300 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
SLC22A3-201ENST00000275300 UGGT2Q9NYU1 1516 aa23.47■■□□□ 1.35
SLC22A3-201ENST00000275300 EHBP1L1Q8N3D4 1523 aa23.46■■□□□ 1.35
SLC22A3-201ENST00000275300 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
SLC22A3-201ENST00000275300 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
SLC22A3-201ENST00000275300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.34
SLC22A3-201ENST00000275300 CNTLNQ9NXG0 1405 aa23.44■■□□□ 1.34
SLC22A3-201ENST00000275300 PPP4R2Q9NY27 417 aa23.41■■□□□ 1.34
SLC22A3-201ENST00000275300 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
SLC22A3-201ENST00000275300 ANKRD30BQ9BXX2 1392 aa23.41■■□□□ 1.34
SLC22A3-201ENST00000275300 ABCC5O15440 1437 aa23.4■■□□□ 1.34
SLC22A3-201ENST00000275300 HNRNPMP52272 730 aaKnown RBP eCLIP23.39■■□□□ 1.342e-6■■■■□ 19.9
SLC22A3-201ENST00000275300 CARD11Q9BXL7 1154 aa23.39■■□□□ 1.34
SLC22A3-201ENST00000275300 TMC1Q8TDI8 760 aa23.39■■□□□ 1.34
SLC22A3-201ENST00000275300 DCAF11Q8TEB1 546 aa23.39■■□□□ 1.34
SLC22A3-201ENST00000275300 AKNAQ7Z591 1439 aa23.39■■□□□ 1.33
SLC22A3-201ENST00000275300 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
SLC22A3-201ENST00000275300 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
SLC22A3-201ENST00000275300 DAPK1P53355 1430 aa23.38■■□□□ 1.33
SLC22A3-201ENST00000275300 NBR1Q14596 966 aa23.37■■□□□ 1.33
SLC22A3-201ENST00000275300 ST20-MTHFSA0A0A6YYL1 179 aa23.35■■□□□ 1.33
SLC22A3-201ENST00000275300 IQGAP2Q13576 1575 aa23.32■■□□□ 1.32
SLC22A3-201ENST00000275300 NCOA1Q15788 1441 aa23.32■■□□□ 1.32
SLC22A3-201ENST00000275300 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
SLC22A3-201ENST00000275300 CCDC136Q96JN2 1154 aa23.31■■□□□ 1.32
SLC22A3-201ENST00000275300 NUP155O75694 1391 aa23.31■■□□□ 1.32
SLC22A3-201ENST00000275300 USP47Q96K76 1375 aa23.31■■□□□ 1.32
SLC22A3-201ENST00000275300 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
SLC22A3-201ENST00000275300 ZBED9Q6R2W3 1325 aa23.28■■□□□ 1.32
SLC22A3-201ENST00000275300 BCL11AQ9H165 835 aa23.28■■□□□ 1.32
SLC22A3-201ENST00000275300 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
SLC22A3-201ENST00000275300 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
SLC22A3-201ENST00000275300 HECW1Q76N89 1606 aa23.27■■□□□ 1.32
SLC22A3-201ENST00000275300 TSPY4P0CV99 314 aa23.25■■□□□ 1.31
SLC22A3-201ENST00000275300 TSPY10P0CW01 314 aa23.25■■□□□ 1.31
SLC22A3-201ENST00000275300 CC2D1BQ5T0F9 858 aaKnown RBP23.25■■□□□ 1.31
SLC22A3-201ENST00000275300 TCOF1Q13428 1488 aaKnown RBP23.24■■□□□ 1.31
SLC22A3-201ENST00000275300 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
SLC22A3-201ENST00000275300 NUP153P49790 1475 aaKnown RBP23.24■■□□□ 1.31
SLC22A3-201ENST00000275300 RPRD2Q5VT52 1461 aaKnown RBP23.24■■□□□ 1.31
SLC22A3-201ENST00000275300 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
SLC22A3-201ENST00000275300 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
SLC22A3-201ENST00000275300 SKAP1Q86WV1 359 aa23.22■■□□□ 1.31
SLC22A3-201ENST00000275300 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
SLC22A3-201ENST00000275300 WDR62O43379 1518 aa23.2■■□□□ 1.3
SLC22A3-201ENST00000275300 NBPF1Q3BBV0 1214 aa23.2■■□□□ 1.3
SLC22A3-201ENST00000275300 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
SLC22A3-201ENST00000275300 DISP1Q96F81 1524 aa23.16■■□□□ 1.3
SLC22A3-201ENST00000275300 PLIN1O60240 522 aa23.16■■□□□ 1.3
SLC22A3-201ENST00000275300 NUDCQ9Y266 331 aa23.16■■□□□ 1.3
SLC22A3-201ENST00000275300 CDCA7LQ96GN5 454 aa23.14■■□□□ 1.29
SLC22A3-201ENST00000275300 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
SLC22A3-201ENST00000275300 SPATA31E1Q6ZUB1 1445 aa23.13■■□□□ 1.29
SLC22A3-201ENST00000275300 PZPP20742 1482 aa23.13■■□□□ 1.29
SLC22A3-201ENST00000275300 CAMSAP2Q08AD1 1489 aa23.13■■□□□ 1.29
SLC22A3-201ENST00000275300 ANKRD50Q9ULJ7 1429 aa23.12■■□□□ 1.29
SLC22A3-201ENST00000275300 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
SLC22A3-201ENST00000275300 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
SLC22A3-201ENST00000275300 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
SLC22A3-201ENST00000275300 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
SLC22A3-201ENST00000275300 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
SLC22A3-201ENST00000275300 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
SLC22A3-201ENST00000275300 FANCIQ9NVI1 1328 aa23.1■■□□□ 1.29
SLC22A3-201ENST00000275300 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
SLC22A3-201ENST00000275300 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
SLC22A3-201ENST00000275300 ROCK1Q13464 1354 aa23.09■■□□□ 1.29
SLC22A3-201ENST00000275300 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
SLC22A3-201ENST00000275300 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.29
SLC22A3-201ENST00000275300 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.29
SLC22A3-201ENST00000275300 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.28
SLC22A3-201ENST00000275300 KIAA0586Q9BVV6 1533 aa23.08■■□□□ 1.28
SLC22A3-201ENST00000275300 ROCK2O75116 1388 aaKnown RBP23.07■■□□□ 1.28
SLC22A3-201ENST00000275300 MYT1LQ9UL68 1186 aa23.06■■□□□ 1.28
SLC22A3-201ENST00000275300 KIF14Q15058 1648 aa23.04■■□□□ 1.28
SLC22A3-201ENST00000275300 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
SLC22A3-201ENST00000275300 KIAA0556O60303 1618 aa23.01■■□□□ 1.27
SLC22A3-201ENST00000275300 KIF15Q9NS87 1388 aa23.01■■□□□ 1.27
SLC22A3-201ENST00000275300 NOP58Q9Y2X3 529 aaKnown RBP23■■□□□ 1.27
SLC22A3-201ENST00000275300 BCORL1Q5H9F3 1711 aa22.99■■□□□ 1.27
SLC22A3-201ENST00000275300 DNMT1P26358 1616 aaKnown RBP22.98■■□□□ 1.27
SLC22A3-201ENST00000275300 RAPGEF6Q8TEU7 1601 aa22.97■■□□□ 1.27
SLC22A3-201ENST00000275300 C9orf84Q5VXU9 1444 aa22.97■■□□□ 1.27
SLC22A3-201ENST00000275300 PANK3Q9H999 370 aa22.97■■□□□ 1.27
SLC22A3-201ENST00000275300 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
SLC22A3-201ENST00000275300 LAS1LQ9Y4W2 734 aaKnown RBP22.96■■□□□ 1.27
SLC22A3-201ENST00000275300 IFT140Q96RY7 1462 aa22.95■■□□□ 1.27
SLC22A3-201ENST00000275300 ERICH6BQ5W0A0 696 aa22.95■■□□□ 1.27
SLC22A3-201ENST00000275300 DEKP35659 375 aaKnown RBP22.95■■□□□ 1.26
SLC22A3-201ENST00000275300 ANP32AP39687 249 aaKnown RBP22.95■■□□□ 1.26
SLC22A3-201ENST00000275300 SMG6Q86US8 1419 aaKnown RBP22.93■■□□□ 1.26
SLC22A3-201ENST00000275300 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
SLC22A3-201ENST00000275300 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
SLC22A3-201ENST00000275300 RRP1P56182 461 aaKnown RBP22.9■■□□□ 1.26
SLC22A3-201ENST00000275300 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
SLC22A3-201ENST00000275300 ATP10BO94823 1461 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms