RNA–Protein interactions for RNA: ENST00000275227.8

SLC18B1-201, Transcript of solute carrier family 18 member B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC18B1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18B1-201ENST00000275227 ITSN2Q9NZM3 1697 aa24.66■■□□□ 1.54
SLC18B1-201ENST00000275227 CAMSAP2Q08AD1 1489 aa24.66■■□□□ 1.54
SLC18B1-201ENST00000275227 GTF3C3Q9Y5Q9 886 aa24.65■■□□□ 1.54
SLC18B1-201ENST00000275227 ROCK1Q13464 1354 aa24.65■■□□□ 1.54
SLC18B1-201ENST00000275227 CENPBP07199 599 aaPredicted RBP24.65■■□□□ 1.54
SLC18B1-201ENST00000275227 PTPRGP23470 1445 aa24.64■■□□□ 1.54
SLC18B1-201ENST00000275227 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.53
SLC18B1-201ENST00000275227 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
SLC18B1-201ENST00000275227 CFDP1Q9UEE9 299 aaPredicted RBP24.62■■□□□ 1.53
SLC18B1-201ENST00000275227 YTHDC1Q96MU7 727 aaKnown RBP24.61■■□□□ 1.53
SLC18B1-201ENST00000275227 ABCC10Q5T3U5 1492 aa24.6■■□□□ 1.53
SLC18B1-201ENST00000275227 TRIM52Q96A61 297 aa24.59■■□□□ 1.53
SLC18B1-201ENST00000275227 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
SLC18B1-201ENST00000275227 TONSLQ96HA7 1378 aa24.59■■□□□ 1.53
SLC18B1-201ENST00000275227 ERCC6L2Q5T890 1561 aa24.57■■□□□ 1.52
SLC18B1-201ENST00000275227 CDC42BPAQ5VT25 1732 aa24.57■■□□□ 1.52
SLC18B1-201ENST00000275227 KDM5BQ9UGL1 1544 aa24.56■■□□□ 1.52
SLC18B1-201ENST00000275227 ZNF777Q9ULD5 760 aaPredicted RBP24.55■■□□□ 1.52
SLC18B1-201ENST00000275227 MPHOSPH9Q99550 1183 aa24.53■■□□□ 1.52
SLC18B1-201ENST00000275227 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
SLC18B1-201ENST00000275227 ADGBQ8N7X0 1667 aa24.5■■□□□ 1.51
SLC18B1-201ENST00000275227 NCOA1Q15788 1441 aa24.5■■□□□ 1.51
SLC18B1-201ENST00000275227 ADGRL2O95490 1459 aa24.48■■□□□ 1.51
SLC18B1-201ENST00000275227 FOXD1Q16676 465 aa24.47■■□□□ 1.51
SLC18B1-201ENST00000275227 CLASP1Q7Z460 1538 aa24.46■■□□□ 1.51
SLC18B1-201ENST00000275227 HIRIP3Q9BW71 556 aaPredicted RBP24.43■■□□□ 1.5
SLC18B1-201ENST00000275227 ABCC2Q92887 1545 aa24.41■■□□□ 1.5
SLC18B1-201ENST00000275227 ANKRD30BQ9BXX2 1392 aa24.4■■□□□ 1.5
SLC18B1-201ENST00000275227 PZPP20742 1482 aa24.4■■□□□ 1.5
SLC18B1-201ENST00000275227 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.5
SLC18B1-201ENST00000275227 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
SLC18B1-201ENST00000275227 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
SLC18B1-201ENST00000275227 CDC42BPBQ9Y5S2 1711 aa24.37■■□□□ 1.49
SLC18B1-201ENST00000275227 C9orf84Q5VXU9 1444 aa24.37■■□□□ 1.49
SLC18B1-201ENST00000275227 PREX2Q70Z35 1606 aa24.37■■□□□ 1.49
SLC18B1-201ENST00000275227 SLC4A1APQ9BWU0 796 aaKnown RBP24.36■■□□□ 1.49
SLC18B1-201ENST00000275227 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
SLC18B1-201ENST00000275227 TTC37Q6PGP7 1564 aa24.35■■□□□ 1.49
SLC18B1-201ENST00000275227 MBD5Q9P267 1494 aa24.35■■□□□ 1.49
SLC18B1-201ENST00000275227 DDX10Q13206 875 aaKnown RBP24.34■■□□□ 1.49
SLC18B1-201ENST00000275227 HNRNPMP52272 730 aaKnown RBP eCLIP24.33■■□□□ 1.49
SLC18B1-201ENST00000275227 ARHGEF5Q12774 1597 aa24.33■■□□□ 1.49
SLC18B1-201ENST00000275227 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.48
SLC18B1-201ENST00000275227 ANKRD50Q9ULJ7 1429 aa24.32■■□□□ 1.48
SLC18B1-201ENST00000275227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.31■■□□□ 1.48
SLC18B1-201ENST00000275227 L3MBTL2Q969R5 705 aa24.31■■□□□ 1.48
SLC18B1-201ENST00000275227 TEX14Q8IWB6 1497 aa24.28■■□□□ 1.48
SLC18B1-201ENST00000275227 ZCCHC11Q5TAX3 1644 aaKnown RBP24.26■■□□□ 1.47
SLC18B1-201ENST00000275227 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
SLC18B1-201ENST00000275227 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
SLC18B1-201ENST00000275227 TSPY10P0CW01 314 aa24.25■■□□□ 1.47
SLC18B1-201ENST00000275227 UHRF1BP1LA0JNW5 1464 aa24.25■■□□□ 1.47
SLC18B1-201ENST00000275227 KIF15Q9NS87 1388 aa24.24■■□□□ 1.47
SLC18B1-201ENST00000275227 KIAA1107Q9UPP5 1409 aa24.23■■□□□ 1.47
SLC18B1-201ENST00000275227 ARHGAP5Q13017 1502 aa24.23■■□□□ 1.47
SLC18B1-201ENST00000275227 SYCP2Q9BX26 1530 aa24.23■■□□□ 1.47
SLC18B1-201ENST00000275227 PKD2Q13563 968 aa24.2■■□□□ 1.46
SLC18B1-201ENST00000275227 KCNH8Q96L42 1107 aa24.2■■□□□ 1.46
SLC18B1-201ENST00000275227 MYO5CQ9NQX4 1742 aa24.2■■□□□ 1.46
SLC18B1-201ENST00000275227 NBPF8Q3BBV2 869 aa24.18■■□□□ 1.46
SLC18B1-201ENST00000275227 KDM5DQ9BY66 1539 aa24.18■■□□□ 1.46
SLC18B1-201ENST00000275227 NUP155O75694 1391 aa24.18■■□□□ 1.46
SLC18B1-201ENST00000275227 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
SLC18B1-201ENST00000275227 MAST1Q9Y2H9 1570 aa24.13■■□□□ 1.45
SLC18B1-201ENST00000275227 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
SLC18B1-201ENST00000275227 ARHGEF12Q9NZN5 1544 aa24.13■■□□□ 1.45
SLC18B1-201ENST00000275227 PLCH2O75038 1416 aa24.11■■□□□ 1.45
SLC18B1-201ENST00000275227 EIF4G2P78344 907 aaKnown RBP eCLIP24.09■■□□□ 1.45
SLC18B1-201ENST00000275227 PLEKHH2Q8IVE3 1493 aa24.09■■□□□ 1.45
SLC18B1-201ENST00000275227 WASHC2AQ641Q2 1341 aa24.08■■□□□ 1.45
SLC18B1-201ENST00000275227 PLXNC1O60486 1568 aa24.05■■□□□ 1.44
SLC18B1-201ENST00000275227 FAM135AQ9P2D6 1515 aa24.04■■□□□ 1.44
SLC18B1-201ENST00000275227 ABCC1P33527 1531 aa24.03■■□□□ 1.44
SLC18B1-201ENST00000275227 SPATA31E1Q6ZUB1 1445 aa24.02■■□□□ 1.44
SLC18B1-201ENST00000275227 UNC13BO14795 1591 aa24.01■■□□□ 1.43
SLC18B1-201ENST00000275227 ANP32CO43423 234 aa24.01■■□□□ 1.43
SLC18B1-201ENST00000275227 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
SLC18B1-201ENST00000275227 C11orf95C9JLR9 678 aaPredicted RBP24■■□□□ 1.43
SLC18B1-201ENST00000275227 TRAPPC8Q9Y2L5 1435 aa23.99■■□□□ 1.43
SLC18B1-201ENST00000275227 WDR7Q9Y4E6 1490 aa23.99■■□□□ 1.43
SLC18B1-201ENST00000275227 CCER2I3L3R5 266 aa23.96■■□□□ 1.43
SLC18B1-201ENST00000275227 ARAP3Q8WWN8 1544 aa23.95■■□□□ 1.42
SLC18B1-201ENST00000275227 DUOX2Q9NRD8 1548 aa23.95■■□□□ 1.42
SLC18B1-201ENST00000275227 CCDC7Q96M83 1385 aa23.94■■□□□ 1.42
SLC18B1-201ENST00000275227 ZNF326Q5BKZ1 582 aaKnown RBP23.93■■□□□ 1.42
SLC18B1-201ENST00000275227 UHRF1BP1Q6BDS2 1440 aa23.92■■□□□ 1.42
SLC18B1-201ENST00000275227 IQGAP3Q86VI3 1631 aa23.91■■□□□ 1.42
SLC18B1-201ENST00000275227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.91■■□□□ 1.42
SLC18B1-201ENST00000275227 PLA2R1Q13018 1463 aa23.9■■□□□ 1.42
SLC18B1-201ENST00000275227 ERBINQ96RT1 1412 aa23.9■■□□□ 1.42
SLC18B1-201ENST00000275227 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
SLC18B1-201ENST00000275227 CNTLNQ9NXG0 1405 aa23.9■■□□□ 1.42
SLC18B1-201ENST00000275227 ABCA9Q8IUA7 1624 aa23.89■■□□□ 1.41
SLC18B1-201ENST00000275227 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
SLC18B1-201ENST00000275227 ASXL2Q76L83 1435 aa23.87■■□□□ 1.41
SLC18B1-201ENST00000275227 AFAP1Q8N556 730 aa23.87■■□□□ 1.41
SLC18B1-201ENST00000275227 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
SLC18B1-201ENST00000275227 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
SLC18B1-201ENST00000275227 ZFYVE16Q7Z3T8 1539 aa23.86■■□□□ 1.41
SLC18B1-201ENST00000275227 USP47Q96K76 1375 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms