RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 SMG6Q86US8 1419 aaKnown RBP12.43□□□□□ -0.42
HMGCLL1-201ENST00000274901 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
HMGCLL1-201ENST00000274901 PTPRKQ15262 1439 aa12.42□□□□□ -0.42
HMGCLL1-201ENST00000274901 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
HMGCLL1-201ENST00000274901 FBLN2P98095 1184 aa12.41□□□□□ -0.42
HMGCLL1-201ENST00000274901 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
HMGCLL1-201ENST00000274901 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
HMGCLL1-201ENST00000274901 PCF11O94913 1555 aaKnown RBP12.4□□□□□ -0.42
HMGCLL1-201ENST00000274901 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
HMGCLL1-201ENST00000274901 UACAQ9BZF9 1416 aa12.4□□□□□ -0.42
HMGCLL1-201ENST00000274901 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
HMGCLL1-201ENST00000274901 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
HMGCLL1-201ENST00000274901 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
HMGCLL1-201ENST00000274901 NUDCQ9Y266 331 aa12.38□□□□□ -0.43
HMGCLL1-201ENST00000274901 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
HMGCLL1-201ENST00000274901 NCOA1Q15788 1441 aa12.37□□□□□ -0.43
HMGCLL1-201ENST00000274901 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
HMGCLL1-201ENST00000274901 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
HMGCLL1-201ENST00000274901 HFM1A2PYH4 1435 aa12.35□□□□□ -0.43
HMGCLL1-201ENST00000274901 PDE4AP27815 886 aa12.35□□□□□ -0.43
HMGCLL1-201ENST00000274901 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
HMGCLL1-201ENST00000274901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.43
HMGCLL1-201ENST00000274901 CNGB1Q14028 1251 aaPredicted RBP12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 GSE1Q14687 1217 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 SAMD9Q5K651 1589 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 NAIPQ13075 1403 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 FMN1Q68DA7 1419 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 CASKIN1Q8WXD9 1431 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 ARID3CA6NKF2 412 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 IQGAP2Q13576 1575 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
HMGCLL1-201ENST00000274901 SKAP1Q86WV1 359 aa12.32□□□□□ -0.44
HMGCLL1-201ENST00000274901 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
HMGCLL1-201ENST00000274901 BACH2Q9BYV9 841 aa12.32□□□□□ -0.44
HMGCLL1-201ENST00000274901 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
HMGCLL1-201ENST00000274901 FYCO1Q9BQS8 1478 aa12.31□□□□□ -0.44
HMGCLL1-201ENST00000274901 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
HMGCLL1-201ENST00000274901 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
HMGCLL1-201ENST00000274901 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
HMGCLL1-201ENST00000274901 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
HMGCLL1-201ENST00000274901 SLC4A3P48751 1232 aa12.29□□□□□ -0.44
HMGCLL1-201ENST00000274901 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
HMGCLL1-201ENST00000274901 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
HMGCLL1-201ENST00000274901 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
HMGCLL1-201ENST00000274901 SYNJ2O15056 1496 aa12.28□□□□□ -0.44
HMGCLL1-201ENST00000274901 NBPF8Q3BBV2 869 aa12.27□□□□□ -0.45
HMGCLL1-201ENST00000274901 KIAA0586Q9BVV6 1533 aa12.27□□□□□ -0.45
HMGCLL1-201ENST00000274901 DHX29Q7Z478 1369 aaKnown RBP12.27□□□□□ -0.45
HMGCLL1-201ENST00000274901 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.45
HMGCLL1-201ENST00000274901 PKNOX2Q96KN3 472 aa12.26□□□□□ -0.45
HMGCLL1-201ENST00000274901 FOXD1Q16676 465 aa12.25□□□□□ -0.45
HMGCLL1-201ENST00000274901 CEP170Q5SW79 1584 aa12.25□□□□□ -0.45
HMGCLL1-201ENST00000274901 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
HMGCLL1-201ENST00000274901 KDM6BO15054 1643 aa12.24□□□□□ -0.45
HMGCLL1-201ENST00000274901 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
HMGCLL1-201ENST00000274901 RRP1P56182 461 aaKnown RBP12.24□□□□□ -0.45
HMGCLL1-201ENST00000274901 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
HMGCLL1-201ENST00000274901 UGGT2Q9NYU1 1516 aa12.24□□□□□ -0.45
HMGCLL1-201ENST00000274901 DISP1Q96F81 1524 aa12.23□□□□□ -0.45
HMGCLL1-201ENST00000274901 POLR1AO95602 1720 aaPredicted RBP12.23□□□□□ -0.45
HMGCLL1-201ENST00000274901 RRP7BPQ9NSQ0 103 aa12.22□□□□□ -0.45
HMGCLL1-201ENST00000274901 MS4A1P11836 297 aa12.21□□□□□ -0.45
HMGCLL1-201ENST00000274901 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
HMGCLL1-201ENST00000274901 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
HMGCLL1-201ENST00000274901 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
HMGCLL1-201ENST00000274901 HECW1Q76N89 1606 aa12.21□□□□□ -0.46
HMGCLL1-201ENST00000274901 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
HMGCLL1-201ENST00000274901 FAM43AQ8N2R8 423 aa12.19□□□□□ -0.46
HMGCLL1-201ENST00000274901 DAXXQ9UER7 740 aaPredicted RBP12.19□□□□□ -0.46
HMGCLL1-201ENST00000274901 CHIC2Q9UKJ5 165 aa12.19□□□□□ -0.46
HMGCLL1-201ENST00000274901 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
HMGCLL1-201ENST00000274901 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
HMGCLL1-201ENST00000274901 NUP160Q12769 1436 aa12.18□□□□□ -0.46
HMGCLL1-201ENST00000274901 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
HMGCLL1-201ENST00000274901 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
HMGCLL1-201ENST00000274901 EPRSP07814 1512 aaKnown RBP12.17□□□□□ -0.46
HMGCLL1-201ENST00000274901 TEX14Q8IWB6 1497 aa12.17□□□□□ -0.46
HMGCLL1-201ENST00000274901 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
HMGCLL1-201ENST00000274901 RRAGDQ9NQL2 400 aaPredicted RBP12.16□□□□□ -0.46
HMGCLL1-201ENST00000274901 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
HMGCLL1-201ENST00000274901 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
HMGCLL1-201ENST00000274901 RCAN3Q9UKA8 241 aa12.16□□□□□ -0.46
HMGCLL1-201ENST00000274901 MYOM3Q5VTT5 1437 aa12.15□□□□□ -0.46
HMGCLL1-201ENST00000274901 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.46
HMGCLL1-201ENST00000274901 PLIN1O60240 522 aa12.15□□□□□ -0.46
HMGCLL1-201ENST00000274901 LRPPRCP42704 1394 aaKnown RBP12.14□□□□□ -0.47
HMGCLL1-201ENST00000274901 PLB1Q6P1J6 1458 aa12.13□□□□□ -0.47
HMGCLL1-201ENST00000274901 CARMIL2Q6F5E8 1435 aa12.13□□□□□ -0.47
HMGCLL1-201ENST00000274901 EHBP1L1Q8N3D4 1523 aa12.12□□□□□ -0.47
HMGCLL1-201ENST00000274901 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
HMGCLL1-201ENST00000274901 RPRD2Q5VT52 1461 aaKnown RBP12.12□□□□□ -0.47
HMGCLL1-201ENST00000274901 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
HMGCLL1-201ENST00000274901 CHD1O14646 1710 aa12.12□□□□□ -0.47
HMGCLL1-201ENST00000274901 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
HMGCLL1-201ENST00000274901 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
HMGCLL1-201ENST00000274901 ANKRD30BQ9BXX2 1392 aa12.11□□□□□ -0.47
HMGCLL1-201ENST00000274901 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
HMGCLL1-201ENST00000274901 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
HMGCLL1-201ENST00000274901 ZMYND15Q9H091 742 aa12.11□□□□□ -0.47
HMGCLL1-201ENST00000274901 RAPGEF6Q8TEU7 1601 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms