RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 DAPK1P53355 1430 aa28.71■■■□□ 2.19
RAB5A-201ENST00000273047 MPHOSPH9Q99550 1183 aa28.71■■■□□ 2.19
RAB5A-201ENST00000273047 ABCC5O15440 1437 aa28.69■■■□□ 2.18
RAB5A-201ENST00000273047 NUP160Q12769 1436 aa28.69■■■□□ 2.18
RAB5A-201ENST00000273047 CFDP1Q9UEE9 299 aaPredicted RBP28.67■■■□□ 2.18
RAB5A-201ENST00000273047 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
RAB5A-201ENST00000273047 KIF14Q15058 1648 aa28.65■■■□□ 2.18
RAB5A-201ENST00000273047 TROQ12816 1431 aaPredicted RBP28.64■■■□□ 2.18
RAB5A-201ENST00000273047 KDM5BQ9UGL1 1544 aa28.63■■■□□ 2.17
RAB5A-201ENST00000273047 AKNAQ7Z591 1439 aa28.61■■■□□ 2.17
RAB5A-201ENST00000273047 DNMT1P26358 1616 aaKnown RBP28.6■■■□□ 2.17
RAB5A-201ENST00000273047 GPATCH8Q9UKJ3 1502 aaKnown RBP28.57■■■□□ 2.16
RAB5A-201ENST00000273047 CAMSAP2Q08AD1 1489 aa28.56■■■□□ 2.16
RAB5A-201ENST00000273047 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
RAB5A-201ENST00000273047 SLC4A1APQ9BWU0 796 aaKnown RBP28.52■■■□□ 2.16
RAB5A-201ENST00000273047 ROCK1Q13464 1354 aa28.52■■■□□ 2.16
RAB5A-201ENST00000273047 PLEKHD1A6NEE1 506 aa28.51■■■□□ 2.16
RAB5A-201ENST00000273047 ATP10BO94823 1461 aa28.49■■■□□ 2.15
RAB5A-201ENST00000273047 ABCA8O94911 1581 aa28.46■■■□□ 2.15
RAB5A-201ENST00000273047 HSPA5P11021 654 aaKnown RBP28.45■■■□□ 2.15
RAB5A-201ENST00000273047 NCOA1Q15788 1441 aa28.44■■■□□ 2.14
RAB5A-201ENST00000273047 ANKRD30BQ9BXX2 1392 aa28.44■■■□□ 2.14
RAB5A-201ENST00000273047 ITSN2Q9NZM3 1697 aa28.44■■■□□ 2.14
RAB5A-201ENST00000273047 ANP32CO43423 234 aa28.42■■■□□ 2.14
RAB5A-201ENST00000273047 ADCY10Q96PN6 1610 aa28.41■■■□□ 2.14
RAB5A-201ENST00000273047 PTPRGP23470 1445 aa28.4■■■□□ 2.14
RAB5A-201ENST00000273047 NBPF8Q3BBV2 869 aa28.39■■■□□ 2.14
RAB5A-201ENST00000273047 CDC42BPAQ5VT25 1732 aa28.38■■■□□ 2.13
RAB5A-201ENST00000273047 CHD1O14646 1710 aa28.38■■■□□ 2.13
RAB5A-201ENST00000273047 HNRNPMP52272 730 aaKnown RBP eCLIP28.36■■■□□ 2.13
RAB5A-201ENST00000273047 WASHC2AQ641Q2 1341 aa28.36■■■□□ 2.13
RAB5A-201ENST00000273047 PZPP20742 1482 aa28.35■■■□□ 2.13
RAB5A-201ENST00000273047 ABCC10Q5T3U5 1492 aa28.34■■■□□ 2.13
RAB5A-201ENST00000273047 RPRD2Q5VT52 1461 aaKnown RBP28.33■■■□□ 2.13
RAB5A-201ENST00000273047 EIF4G2P78344 907 aaKnown RBP eCLIP28.32■■■□□ 2.12
RAB5A-201ENST00000273047 C11orf95C9JLR9 678 aaPredicted RBP28.31■■■□□ 2.12
RAB5A-201ENST00000273047 ADGBQ8N7X0 1667 aa28.3■■■□□ 2.12
RAB5A-201ENST00000273047 CROCC2H7BZ55 1655 aa28.3■■■□□ 2.12
RAB5A-201ENST00000273047 PKD2Q13563 968 aa28.29■■■□□ 2.12
RAB5A-201ENST00000273047 ANKRD30AQ9BXX3 1397 aa28.29■■■□□ 2.12
RAB5A-201ENST00000273047 ERCC6L2Q5T890 1561 aa28.27■■■□□ 2.12
RAB5A-201ENST00000273047 SUPT16HQ9Y5B9 1047 aaKnown RBP28.27■■■□□ 2.12
RAB5A-201ENST00000273047 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
RAB5A-201ENST00000273047 ANKRD50Q9ULJ7 1429 aa28.26■■■□□ 2.12
RAB5A-201ENST00000273047 ZNF326Q5BKZ1 582 aaKnown RBP28.26■■■□□ 2.11
RAB5A-201ENST00000273047 ADGRL2O95490 1459 aa28.24■■■□□ 2.11
RAB5A-201ENST00000273047 C9orf84Q5VXU9 1444 aa28.24■■■□□ 2.11
RAB5A-201ENST00000273047 CCER2I3L3R5 266 aa28.23■■■□□ 2.11
RAB5A-201ENST00000273047 TSPY4P0CV99 314 aa28.23■■■□□ 2.11
RAB5A-201ENST00000273047 TSPY10P0CW01 314 aa28.23■■■□□ 2.11
RAB5A-201ENST00000273047 NUP155O75694 1391 aa28.2■■■□□ 2.1
RAB5A-201ENST00000273047 KIAA1107Q9UPP5 1409 aa28.17■■■□□ 2.1
RAB5A-201ENST00000273047 CDC42BPBQ9Y5S2 1711 aa28.14■■■□□ 2.1
RAB5A-201ENST00000273047 KIF15Q9NS87 1388 aa28.14■■■□□ 2.09
RAB5A-201ENST00000273047 MBD5Q9P267 1494 aa28.12■■■□□ 2.09
RAB5A-201ENST00000273047 SAMD9LQ8IVG5 1584 aa28.12■■■□□ 2.09
RAB5A-201ENST00000273047 CCDC184Q52MB2 194 aa28.09■■■□□ 2.09
RAB5A-201ENST00000273047 CCDC7Q96M83 1385 aa28.08■■■□□ 2.09
RAB5A-201ENST00000273047 TTC37Q6PGP7 1564 aa28.08■■■□□ 2.09
RAB5A-201ENST00000273047 SHROOM2Q13796 1616 aa28.08■■■□□ 2.09
RAB5A-201ENST00000273047 CNGB1Q14028 1251 aaPredicted RBP28.08■■■□□ 2.08
RAB5A-201ENST00000273047 SHANK2Q9UPX8 1470 aa28.07■■■□□ 2.08
RAB5A-201ENST00000273047 BCANQ96GW7 911 aa28.07■■■□□ 2.08
RAB5A-201ENST00000273047 POLR3GLQ9BT43 218 aa28.05■■■□□ 2.08
RAB5A-201ENST00000273047 KDM2AQ9Y2K7 1162 aa28.05■■■□□ 2.08
RAB5A-201ENST00000273047 PREX2Q70Z35 1606 aa28.04■■■□□ 2.08
RAB5A-201ENST00000273047 KIF7Q2M1P5 1343 aa28.04■■■□□ 2.08
RAB5A-201ENST00000273047 TSHZ2Q9NRE2 1034 aa28.04■■■□□ 2.08
RAB5A-201ENST00000273047 SPATA31E1Q6ZUB1 1445 aa28.04■■■□□ 2.08
RAB5A-201ENST00000273047 SYCP2Q9BX26 1530 aa28.03■■■□□ 2.08
RAB5A-201ENST00000273047 ARHGAP5Q13017 1502 aa28.03■■■□□ 2.08
RAB5A-201ENST00000273047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.08
RAB5A-201ENST00000273047 CNTLNQ9NXG0 1405 aa28.03■■■□□ 2.08
RAB5A-201ENST00000273047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.01■■■□□ 2.08
RAB5A-201ENST00000273047 CCDC141Q6ZP82 1450 aa28.01■■■□□ 2.08
RAB5A-201ENST00000273047 FKBP8Q14318 412 aa27.99■■■□□ 2.07
RAB5A-201ENST00000273047 ARHGEF5Q12774 1597 aa27.99■■■□□ 2.07
RAB5A-201ENST00000273047 HNRNPUQ00839 825 aaKnown RBP eCLIP27.98■■■□□ 2.07
RAB5A-201ENST00000273047 ABCC2Q92887 1545 aa27.98■■■□□ 2.07
RAB5A-201ENST00000273047 USP47Q96K76 1375 aa27.94■■■□□ 2.06
RAB5A-201ENST00000273047 DCAF11Q8TEB1 546 aa27.94■■■□□ 2.06
RAB5A-201ENST00000273047 PRKRIP1Q9H875 184 aaPredicted RBP27.94■■■□□ 2.06
RAB5A-201ENST00000273047 BCORL1Q5H9F3 1711 aa27.89■■■□□ 2.06
RAB5A-201ENST00000273047 ANP32EQ9BTT0 268 aa27.89■■■□□ 2.06
RAB5A-201ENST00000273047 ARHGEF12Q9NZN5 1544 aa27.88■■■□□ 2.05
RAB5A-201ENST00000273047 FAM135AQ9P2D6 1515 aa27.88■■■□□ 2.05
RAB5A-201ENST00000273047 RGL3Q3MIN7 710 aa27.88■■■□□ 2.05
RAB5A-201ENST00000273047 FAM9BQ8IZU0 186 aa27.88■■■□□ 2.05
RAB5A-201ENST00000273047 KDM5DQ9BY66 1539 aa27.88■■■□□ 2.05
RAB5A-201ENST00000273047 MYO5CQ9NQX4 1742 aa27.87■■■□□ 2.05
RAB5A-201ENST00000273047 RSPH4AQ5TD94 716 aa27.87■■■□□ 2.05
RAB5A-201ENST00000273047 CARD11Q9BXL7 1154 aa27.87■■■□□ 2.05
RAB5A-201ENST00000273047 ZCCHC11Q5TAX3 1644 aaKnown RBP27.86■■■□□ 2.05
RAB5A-201ENST00000273047 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
RAB5A-201ENST00000273047 PLEKHH2Q8IVE3 1493 aa27.84■■■□□ 2.05
RAB5A-201ENST00000273047 MRS2Q9HD23 443 aa27.84■■■□□ 2.05
RAB5A-201ENST00000273047 KDM5CP41229 1560 aa27.81■■■□□ 2.04
RAB5A-201ENST00000273047 POLR1AO95602 1720 aaPredicted RBP27.8■■■□□ 2.04
RAB5A-201ENST00000273047 ST20-MTHFSA0A0A6YYL1 179 aa27.79■■■□□ 2.04
RAB5A-201ENST00000273047 UHRF1BP1Q6BDS2 1440 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms