RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
TRIM43-201ENST00000272395 FANCAO15360 1455 aa12.98□□□□□ -0.33
TRIM43-201ENST00000272395 ARHGAP5Q13017 1502 aa12.97□□□□□ -0.33
TRIM43-201ENST00000272395 SUPT6HQ7KZ85 1726 aaKnown RBP12.97□□□□□ -0.33
TRIM43-201ENST00000272395 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
TRIM43-201ENST00000272395 COL17A1Q9UMD9 1497 aaPredicted RBP12.96□□□□□ -0.34
TRIM43-201ENST00000272395 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.34
TRIM43-201ENST00000272395 MYO5CQ9NQX4 1742 aa12.95□□□□□ -0.34
TRIM43-201ENST00000272395 EFCAB2Q5VUJ9 269 aa12.95□□□□□ -0.34
TRIM43-201ENST00000272395 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
TRIM43-201ENST00000272395 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
TRIM43-201ENST00000272395 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
TRIM43-201ENST00000272395 PREX2Q70Z35 1606 aa12.94□□□□□ -0.34
TRIM43-201ENST00000272395 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
TRIM43-201ENST00000272395 NEO1Q92859 1461 aa12.94□□□□□ -0.34
TRIM43-201ENST00000272395 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
TRIM43-201ENST00000272395 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
TRIM43-201ENST00000272395 ARAP3Q8WWN8 1544 aa12.93□□□□□ -0.34
TRIM43-201ENST00000272395 CDC42BPBQ9Y5S2 1711 aa12.92□□□□□ -0.34
TRIM43-201ENST00000272395 RAPGEF3O95398 923 aa12.92□□□□□ -0.34
TRIM43-201ENST00000272395 KDM6BO15054 1643 aa12.91□□□□□ -0.34
TRIM43-201ENST00000272395 ADGRL1O94910 1474 aa12.91□□□□□ -0.34
TRIM43-201ENST00000272395 MYOM3Q5VTT5 1437 aa12.91□□□□□ -0.34
TRIM43-201ENST00000272395 SCAPERQ9BY12 1400 aa12.91□□□□□ -0.34
TRIM43-201ENST00000272395 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
TRIM43-201ENST00000272395 CFAP74Q9C0B2 1584 aa12.9□□□□□ -0.34
TRIM43-201ENST00000272395 ZNF316A6NFI3 1004 aaPredicted RBP12.89□□□□□ -0.35
TRIM43-201ENST00000272395 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
TRIM43-201ENST00000272395 SAMD9LQ8IVG5 1584 aa12.89□□□□□ -0.35
TRIM43-201ENST00000272395 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM43-201ENST00000272395 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
TRIM43-201ENST00000272395 ITSN2Q9NZM3 1697 aa12.87□□□□□ -0.35
TRIM43-201ENST00000272395 ABCC1P33527 1531 aa12.87□□□□□ -0.35
TRIM43-201ENST00000272395 SYCP2Q9BX26 1530 aa12.87□□□□□ -0.35
TRIM43-201ENST00000272395 FRMPD1Q5SYB0 1578 aa12.87□□□□□ -0.35
TRIM43-201ENST00000272395 RRBP1Q9P2E9 1410 aaKnown RBP12.87□□□□□ -0.35
TRIM43-201ENST00000272395 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
TRIM43-201ENST00000272395 AFAP1Q8N556 730 aa12.86□□□□□ -0.35
TRIM43-201ENST00000272395 CAMSAP2Q08AD1 1489 aa12.86□□□□□ -0.35
TRIM43-201ENST00000272395 FGD6Q6ZV73 1430 aa12.86□□□□□ -0.35
TRIM43-201ENST00000272395 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
TRIM43-201ENST00000272395 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
TRIM43-201ENST00000272395 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
TRIM43-201ENST00000272395 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.35
TRIM43-201ENST00000272395 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
TRIM43-201ENST00000272395 PLEKHH2Q8IVE3 1493 aa12.83□□□□□ -0.36
TRIM43-201ENST00000272395 ACIN1Q9UKV3 1341 aaKnown RBP12.83□□□□□ -0.36
TRIM43-201ENST00000272395 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
TRIM43-201ENST00000272395 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
TRIM43-201ENST00000272395 PTPN23Q9H3S7 1636 aa12.82□□□□□ -0.36
TRIM43-201ENST00000272395 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
TRIM43-201ENST00000272395 RICTORQ6R327 1708 aa12.81□□□□□ -0.36
TRIM43-201ENST00000272395 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
TRIM43-201ENST00000272395 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
TRIM43-201ENST00000272395 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
TRIM43-201ENST00000272395 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
TRIM43-201ENST00000272395 KDM5CP41229 1560 aa12.79□□□□□ -0.36
TRIM43-201ENST00000272395 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
TRIM43-201ENST00000272395 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
TRIM43-201ENST00000272395 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
TRIM43-201ENST00000272395 ABCC5O15440 1437 aa12.76□□□□□ -0.37
TRIM43-201ENST00000272395 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
TRIM43-201ENST00000272395 ZFYVE16Q7Z3T8 1539 aa12.76□□□□□ -0.37
TRIM43-201ENST00000272395 ITGAEP38570 1179 aa12.75□□□□□ -0.37
TRIM43-201ENST00000272395 ARHGEF5Q12774 1597 aa12.75□□□□□ -0.37
TRIM43-201ENST00000272395 MLH3Q9UHC1 1453 aa12.75□□□□□ -0.37
TRIM43-201ENST00000272395 HECW2Q9P2P5 1572 aa12.74□□□□□ -0.37
TRIM43-201ENST00000272395 DAPK1P53355 1430 aa12.74□□□□□ -0.37
TRIM43-201ENST00000272395 ARHGEF40Q8TER5 1519 aa12.74□□□□□ -0.37
TRIM43-201ENST00000272395 MAGI2Q86UL8 1455 aa12.74□□□□□ -0.37
TRIM43-201ENST00000272395 TSPY4P0CV99 314 aa12.73□□□□□ -0.37
TRIM43-201ENST00000272395 TSPY10P0CW01 314 aa12.73□□□□□ -0.37
TRIM43-201ENST00000272395 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
TRIM43-201ENST00000272395 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
TRIM43-201ENST00000272395 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
TRIM43-201ENST00000272395 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
TRIM43-201ENST00000272395 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
TRIM43-201ENST00000272395 ABCA6Q8N139 1617 aa12.72□□□□□ -0.37
TRIM43-201ENST00000272395 INO80Q9ULG1 1556 aaPredicted RBP12.72□□□□□ -0.37
TRIM43-201ENST00000272395 PTPRKQ15262 1439 aa12.72□□□□□ -0.37
TRIM43-201ENST00000272395 DNMT1P26358 1616 aaKnown RBP12.72□□□□□ -0.37
TRIM43-201ENST00000272395 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.37
TRIM43-201ENST00000272395 DIP2CQ9Y2E4 1556 aa12.71□□□□□ -0.37
TRIM43-201ENST00000272395 ATP10AO60312 1499 aa12.71□□□□□ -0.38
TRIM43-201ENST00000272395 RTEL1-TNFRSF6BF6WH68 1400 aa12.7□□□□□ -0.38
TRIM43-201ENST00000272395 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
TRIM43-201ENST00000272395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRIM43-201ENST00000272395 RRP7BPQ9NSQ0 103 aa12.69□□□□□ -0.38
TRIM43-201ENST00000272395 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
TRIM43-201ENST00000272395 MAST1Q9Y2H9 1570 aa12.68□□□□□ -0.38
TRIM43-201ENST00000272395 CROCC2H7BZ55 1655 aa12.68□□□□□ -0.38
TRIM43-201ENST00000272395 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
TRIM43-201ENST00000272395 A2MP01023 1474 aa12.67□□□□□ -0.38
TRIM43-201ENST00000272395 MLECQ14165 292 aa12.66□□□□□ -0.38
TRIM43-201ENST00000272395 KIF15Q9NS87 1388 aa12.66□□□□□ -0.38
TRIM43-201ENST00000272395 ANKRD30AQ9BXX3 1397 aa12.65□□□□□ -0.38
TRIM43-201ENST00000272395 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
TRIM43-201ENST00000272395 NCOA1Q15788 1441 aa12.64□□□□□ -0.39
TRIM43-201ENST00000272395 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
TRIM43-201ENST00000272395 PLXNC1O60486 1568 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms