RNA–Protein interactions for RNA: ENST00000272163.8

LBR-201, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBR, Length 3,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-201ENST00000272163 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
LBR-201ENST00000272163 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
LBR-201ENST00000272163 ABCA8O94911 1581 aa12.43□□□□□ -0.42
LBR-201ENST00000272163 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
LBR-201ENST00000272163 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
LBR-201ENST00000272163 NEO1Q92859 1461 aa12.42□□□□□ -0.42
LBR-201ENST00000272163 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
LBR-201ENST00000272163 MAGI3Q5TCQ9 1506 aa12.41□□□□□ -0.42
LBR-201ENST00000272163 WASHC2CQ9Y4E1 1318 aa12.41□□□□□ -0.42
LBR-201ENST00000272163 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
LBR-201ENST00000272163 CEBPAP49715 358 aaPredicted RBP12.4□□□□□ -0.42
LBR-201ENST00000272163 PLCH2O75038 1416 aa12.4□□□□□ -0.42
LBR-201ENST00000272163 HSPA2P54652 639 aa12.4□□□□□ -0.42
LBR-201ENST00000272163 GLI2P10070 1586 aa12.37□□□□□ -0.43
LBR-201ENST00000272163 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
LBR-201ENST00000272163 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
LBR-201ENST00000272163 PPP1R15AO75807 674 aaPredicted RBP12.34□□□□□ -0.43
LBR-201ENST00000272163 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
LBR-201ENST00000272163 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
LBR-201ENST00000272163 KIF14Q15058 1648 aa12.34□□□□□ -0.43
LBR-201ENST00000272163 ZNF644Q9H582 1327 aaPredicted RBP12.33□□□□□ -0.44
LBR-201ENST00000272163 KANK1Q14678 1352 aa12.33□□□□□ -0.44
LBR-201ENST00000272163 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
LBR-201ENST00000272163 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
LBR-201ENST00000272163 SAMD9Q5K651 1589 aa12.31□□□□□ -0.44
LBR-201ENST00000272163 ZNF518AQ6AHZ1 1483 aa12.31□□□□□ -0.44
LBR-201ENST00000272163 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
LBR-201ENST00000272163 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
LBR-201ENST00000272163 CFAP43Q8NDM7 1665 aa12.29□□□□□ -0.44
LBR-201ENST00000272163 ATP10AO60312 1499 aa12.29□□□□□ -0.44
LBR-201ENST00000272163 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
LBR-201ENST00000272163 EID1Q9Y6B2 187 aa12.28□□□□□ -0.44
LBR-201ENST00000272163 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.44
LBR-201ENST00000272163 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
LBR-201ENST00000272163 HDGFP51858 240 aaKnown RBP12.27□□□□□ -0.45
LBR-201ENST00000272163 ZFYVE16Q7Z3T8 1539 aa12.26□□□□□ -0.45
LBR-201ENST00000272163 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
LBR-201ENST00000272163 YEATS2Q9ULM3 1422 aa12.26□□□□□ -0.45
LBR-201ENST00000272163 MAGI2Q86UL8 1455 aa12.26□□□□□ -0.45
LBR-201ENST00000272163 THEMISQ8N1K5 641 aaPredicted RBP12.25□□□□□ -0.45
LBR-201ENST00000272163 PPP6R1Q9UPN7 881 aa12.24□□□□□ -0.45
LBR-201ENST00000272163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.454e-7■■■■■ 28.6
LBR-201ENST00000272163 UHRF1BP1Q6BDS2 1440 aa12.23□□□□□ -0.45
LBR-201ENST00000272163 CFAP74Q9C0B2 1584 aa12.23□□□□□ -0.45
LBR-201ENST00000272163 ANKLE2Q86XL3 938 aa12.23□□□□□ -0.45
LBR-201ENST00000272163 ANKRD30AQ9BXX3 1397 aa12.23□□□□□ -0.45
LBR-201ENST00000272163 PCF11O94913 1555 aaKnown RBP12.23□□□□□ -0.45
LBR-201ENST00000272163 ZNF326Q5BKZ1 582 aaKnown RBP12.22□□□□□ -0.45
LBR-201ENST00000272163 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
LBR-201ENST00000272163 NCOA2Q15596 1464 aa12.21□□□□□ -0.46
LBR-201ENST00000272163 ABCA9Q8IUA7 1624 aa12.2□□□□□ -0.46
LBR-201ENST00000272163 EHBP1L1Q8N3D4 1523 aa12.19□□□□□ -0.46
LBR-201ENST00000272163 CNTLNQ9NXG0 1405 aa12.19□□□□□ -0.46
LBR-201ENST00000272163 MYOM3Q5VTT5 1437 aa12.19□□□□□ -0.46
LBR-201ENST00000272163 GPATCH8Q9UKJ3 1502 aaKnown RBP12.19□□□□□ -0.46
LBR-201ENST00000272163 MAP3K4Q9Y6R4 1608 aa12.18□□□□□ -0.46
LBR-201ENST00000272163 PTPRMP28827 1452 aa12.18□□□□□ -0.46
LBR-201ENST00000272163 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
LBR-201ENST00000272163 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
LBR-201ENST00000272163 ZMYM3Q14202 1370 aa12.16□□□□□ -0.46
LBR-201ENST00000272163 A2MP01023 1474 aa12.16□□□□□ -0.46
LBR-201ENST00000272163 KIF15Q9NS87 1388 aa12.15□□□□□ -0.46
LBR-201ENST00000272163 TTC37Q6PGP7 1564 aa12.15□□□□□ -0.46
LBR-201ENST00000272163 DHX29Q7Z478 1369 aaKnown RBP12.15□□□□□ -0.46
LBR-201ENST00000272163 CCDC141Q6ZP82 1450 aa12.15□□□□□ -0.47
LBR-201ENST00000272163 PIP4K2BP78356 416 aa12.14□□□□□ -0.47
LBR-201ENST00000272163 TXNDC2Q86VQ3 553 aa12.14□□□□□ -0.47
LBR-201ENST00000272163 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
LBR-201ENST00000272163 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
LBR-201ENST00000272163 PKD2Q13563 968 aa12.13□□□□□ -0.47
LBR-201ENST00000272163 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
LBR-201ENST00000272163 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
LBR-201ENST00000272163 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
LBR-201ENST00000272163 TNRQ92752 1358 aa12.11□□□□□ -0.47
LBR-201ENST00000272163 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
LBR-201ENST00000272163 CERKQ8TCT0 537 aa12.11□□□□□ -0.47
LBR-201ENST00000272163 MLH3Q9UHC1 1453 aa12.1□□□□□ -0.47
LBR-201ENST00000272163 TOM1O60784 492 aa12.1□□□□□ -0.47
LBR-201ENST00000272163 PHF23Q9BUL5 403 aaPredicted RBP12.1□□□□□ -0.47
LBR-201ENST00000272163 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
LBR-201ENST00000272163 MIA2Q96PC5 1412 aa12.09□□□□□ -0.47
LBR-201ENST00000272163 FBXO41Q8TF61 875 aa12.09□□□□□ -0.47
LBR-201ENST00000272163 NUP155O75694 1391 aa12.07□□□□□ -0.48
LBR-201ENST00000272163 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
LBR-201ENST00000272163 SUPT6HQ7KZ85 1726 aaKnown RBP12.07□□□□□ -0.48
LBR-201ENST00000272163 ARHGEF40Q8TER5 1519 aa12.06□□□□□ -0.48
LBR-201ENST00000272163 PROSER2Q86WR7 435 aaPredicted RBP12.06□□□□□ -0.48
LBR-201ENST00000272163 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
LBR-201ENST00000272163 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
LBR-201ENST00000272163 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
LBR-201ENST00000272163 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
LBR-201ENST00000272163 SLC52A1Q9NWF4 448 aa12.04□□□□□ -0.48
LBR-201ENST00000272163 HECW2Q9P2P5 1572 aa12.04□□□□□ -0.48
LBR-201ENST00000272163 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
LBR-201ENST00000272163 NUTM2DQ5VT03 806 aaPredicted RBP12.03□□□□□ -0.48
LBR-201ENST00000272163 LMTK3Q96Q04 1460 aa12.03□□□□□ -0.48
LBR-201ENST00000272163 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
LBR-201ENST00000272163 ABCC1P33527 1531 aa12.02□□□□□ -0.49
LBR-201ENST00000272163 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
LBR-201ENST00000272163 SLC26A8Q96RN1 970 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms