RNA–Protein interactions for RNA: ENST00000271227.10

SLC44A3-201, Transcript of solute carrier family 44 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A3, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3-201ENST00000271227 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
SLC44A3-201ENST00000271227 KIF14Q15058 1648 aa25.99■■□□□ 1.75
SLC44A3-201ENST00000271227 DENND4BO75064 1496 aaPredicted RBP25.99■■□□□ 1.75
SLC44A3-201ENST00000271227 ABCA8O94911 1581 aa25.99■■□□□ 1.75
SLC44A3-201ENST00000271227 GPATCH8Q9UKJ3 1502 aaKnown RBP25.99■■□□□ 1.75
SLC44A3-201ENST00000271227 MPHOSPH9Q99550 1183 aa25.97■■□□□ 1.75
SLC44A3-201ENST00000271227 PLEKHD1A6NEE1 506 aa25.96■■□□□ 1.75
SLC44A3-201ENST00000271227 ZNF777Q9ULD5 760 aaPredicted RBP25.96■■□□□ 1.75
SLC44A3-201ENST00000271227 CAMSAP2Q08AD1 1489 aa25.96■■□□□ 1.75
SLC44A3-201ENST00000271227 HIRIP3Q9BW71 556 aaPredicted RBP25.96■■□□□ 1.75
SLC44A3-201ENST00000271227 ATP10BO94823 1461 aa25.95■■□□□ 1.74
SLC44A3-201ENST00000271227 ADCY10Q96PN6 1610 aa25.94■■□□□ 1.74
SLC44A3-201ENST00000271227 ITSN2Q9NZM3 1697 aa25.92■■□□□ 1.74
SLC44A3-201ENST00000271227 PTPRGP23470 1445 aa25.92■■□□□ 1.74
SLC44A3-201ENST00000271227 DDX10Q13206 875 aaKnown RBP25.9■■□□□ 1.74
SLC44A3-201ENST00000271227 FOXD1Q16676 465 aa25.89■■□□□ 1.74
SLC44A3-201ENST00000271227 CHD1O14646 1710 aa25.87■■□□□ 1.73
SLC44A3-201ENST00000271227 KDM5BQ9UGL1 1544 aa25.87■■□□□ 1.73
SLC44A3-201ENST00000271227 NCOA1Q15788 1441 aa25.83■■□□□ 1.73
SLC44A3-201ENST00000271227 ABCC10Q5T3U5 1492 aa25.83■■□□□ 1.73
SLC44A3-201ENST00000271227 SLC4A1APQ9BWU0 796 aaKnown RBP25.81■■□□□ 1.72
SLC44A3-201ENST00000271227 CDC42BPAQ5VT25 1732 aa25.77■■□□□ 1.72
SLC44A3-201ENST00000271227 ANKRD30BQ9BXX2 1392 aa25.77■■□□□ 1.72
SLC44A3-201ENST00000271227 ADGRL2O95490 1459 aa25.76■■□□□ 1.71
SLC44A3-201ENST00000271227 ANKRD30AQ9BXX3 1397 aa25.75■■□□□ 1.71
SLC44A3-201ENST00000271227 L3MBTL2Q969R5 705 aa25.75■■□□□ 1.71
SLC44A3-201ENST00000271227 ADGBQ8N7X0 1667 aa25.74■■□□□ 1.71
SLC44A3-201ENST00000271227 CROCC2H7BZ55 1655 aa25.74■■□□□ 1.71
SLC44A3-201ENST00000271227 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
SLC44A3-201ENST00000271227 KCNH8Q96L42 1107 aa25.72■■□□□ 1.71
SLC44A3-201ENST00000271227 PZPP20742 1482 aa25.7■■□□□ 1.71
SLC44A3-201ENST00000271227 RPRD2Q5VT52 1461 aaKnown RBP25.69■■□□□ 1.7
SLC44A3-201ENST00000271227 ERCC6L2Q5T890 1561 aa25.69■■□□□ 1.7
SLC44A3-201ENST00000271227 C9orf84Q5VXU9 1444 aa25.68■■□□□ 1.7
SLC44A3-201ENST00000271227 ANKRD50Q9ULJ7 1429 aa25.67■■□□□ 1.7
SLC44A3-201ENST00000271227 HNRNPMP52272 730 aaKnown RBP eCLIP25.67■■□□□ 1.7
SLC44A3-201ENST00000271227 TSPY4P0CV99 314 aa25.66■■□□□ 1.7
SLC44A3-201ENST00000271227 TSPY10P0CW01 314 aa25.66■■□□□ 1.7
SLC44A3-201ENST00000271227 SHANK2Q9UPX8 1470 aa25.66■■□□□ 1.7
SLC44A3-201ENST00000271227 HSPA5P11021 654 aaKnown RBP25.63■■□□□ 1.69
SLC44A3-201ENST00000271227 TEX14Q8IWB6 1497 aa25.61■■□□□ 1.69
SLC44A3-201ENST00000271227 ANP32CO43423 234 aa25.6■■□□□ 1.69
SLC44A3-201ENST00000271227 MBD5Q9P267 1494 aa25.6■■□□□ 1.69
SLC44A3-201ENST00000271227 EIF4G2P78344 907 aaKnown RBP eCLIP25.6■■□□□ 1.69
SLC44A3-201ENST00000271227 PKD2Q13563 968 aa25.6■■□□□ 1.69
SLC44A3-201ENST00000271227 ABCC2Q92887 1545 aa25.59■■□□□ 1.69
SLC44A3-201ENST00000271227 KIAA1107Q9UPP5 1409 aa25.59■■□□□ 1.69
SLC44A3-201ENST00000271227 NBPF8Q3BBV2 869 aa25.58■■□□□ 1.68
SLC44A3-201ENST00000271227 PREX2Q70Z35 1606 aa25.56■■□□□ 1.68
SLC44A3-201ENST00000271227 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
SLC44A3-201ENST00000271227 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
SLC44A3-201ENST00000271227 KIF15Q9NS87 1388 aa25.56■■□□□ 1.68
SLC44A3-201ENST00000271227 NUP155O75694 1391 aa25.56■■□□□ 1.68
SLC44A3-201ENST00000271227 CDC42BPBQ9Y5S2 1711 aa25.55■■□□□ 1.68
SLC44A3-201ENST00000271227 CCDC141Q6ZP82 1450 aa25.54■■□□□ 1.68
SLC44A3-201ENST00000271227 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
SLC44A3-201ENST00000271227 WASHC2AQ641Q2 1341 aa25.53■■□□□ 1.68
SLC44A3-201ENST00000271227 TTC37Q6PGP7 1564 aa25.53■■□□□ 1.68
SLC44A3-201ENST00000271227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.52■■□□□ 1.68
SLC44A3-201ENST00000271227 ARHGAP5Q13017 1502 aa25.51■■□□□ 1.67
SLC44A3-201ENST00000271227 CCER2I3L3R5 266 aa25.51■■□□□ 1.67
SLC44A3-201ENST00000271227 RSPH4AQ5TD94 716 aa25.5■■□□□ 1.67
SLC44A3-201ENST00000271227 SYCP2Q9BX26 1530 aa25.47■■□□□ 1.67
SLC44A3-201ENST00000271227 KDM5DQ9BY66 1539 aa25.43■■□□□ 1.66
SLC44A3-201ENST00000271227 C11orf95C9JLR9 678 aaPredicted RBP25.41■■□□□ 1.66
SLC44A3-201ENST00000271227 UHRF1BP1LA0JNW5 1464 aa25.41■■□□□ 1.66
SLC44A3-201ENST00000271227 ZCCHC11Q5TAX3 1644 aaKnown RBP25.4■■□□□ 1.66
SLC44A3-201ENST00000271227 ZNF326Q5BKZ1 582 aaKnown RBP25.4■■□□□ 1.66
SLC44A3-201ENST00000271227 MYO5CQ9NQX4 1742 aa25.38■■□□□ 1.65
SLC44A3-201ENST00000271227 SPATA31E1Q6ZUB1 1445 aa25.38■■□□□ 1.65
SLC44A3-201ENST00000271227 CCDC7Q96M83 1385 aa25.37■■□□□ 1.65
SLC44A3-201ENST00000271227 PLEKHH2Q8IVE3 1493 aa25.36■■□□□ 1.65
SLC44A3-201ENST00000271227 PLCH2O75038 1416 aa25.35■■□□□ 1.65
SLC44A3-201ENST00000271227 MAST1Q9Y2H9 1570 aa25.34■■□□□ 1.65
SLC44A3-201ENST00000271227 CNTLNQ9NXG0 1405 aa25.33■■□□□ 1.65
SLC44A3-201ENST00000271227 ARHGEF12Q9NZN5 1544 aa25.33■■□□□ 1.65
SLC44A3-201ENST00000271227 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
SLC44A3-201ENST00000271227 EFCAB2Q5VUJ9 269 aa25.32■■□□□ 1.64
SLC44A3-201ENST00000271227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.29■■□□□ 1.64
SLC44A3-201ENST00000271227 KIF7Q2M1P5 1343 aa25.29■■□□□ 1.64
SLC44A3-201ENST00000271227 USP47Q96K76 1375 aa25.26■■□□□ 1.63
SLC44A3-201ENST00000271227 PLXNC1O60486 1568 aa25.25■■□□□ 1.63
SLC44A3-201ENST00000271227 UHRF1BP1Q6BDS2 1440 aa25.25■■□□□ 1.63
SLC44A3-201ENST00000271227 KDM2AQ9Y2K7 1162 aa25.25■■□□□ 1.63
SLC44A3-201ENST00000271227 SUPT16HQ9Y5B9 1047 aaKnown RBP25.24■■□□□ 1.63
SLC44A3-201ENST00000271227 DCAF11Q8TEB1 546 aa25.23■■□□□ 1.63
SLC44A3-201ENST00000271227 UNC13BO14795 1591 aa25.22■■□□□ 1.63
SLC44A3-201ENST00000271227 TRAPPC8Q9Y2L5 1435 aa25.22■■□□□ 1.63
SLC44A3-201ENST00000271227 ABCC1P33527 1531 aa25.22■■□□□ 1.63
SLC44A3-201ENST00000271227 DUOX2Q9NRD8 1548 aa25.21■■□□□ 1.63
SLC44A3-201ENST00000271227 RALGAPBQ86X10 1494 aa25.2■■□□□ 1.62
SLC44A3-201ENST00000271227 CCDC144AA2RUR9 1427 aa25.19■■□□□ 1.62
SLC44A3-201ENST00000271227 CARD11Q9BXL7 1154 aa25.18■■□□□ 1.62
SLC44A3-201ENST00000271227 PRKRIP1Q9H875 184 aaPredicted RBP25.17■■□□□ 1.62
SLC44A3-201ENST00000271227 WDR7Q9Y4E6 1490 aa25.17■■□□□ 1.62
SLC44A3-201ENST00000271227 ERBINQ96RT1 1412 aa25.17■■□□□ 1.62
SLC44A3-201ENST00000271227 KDM5CP41229 1560 aa25.16■■□□□ 1.62
SLC44A3-201ENST00000271227 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
SLC44A3-201ENST00000271227 AFAP1Q8N556 730 aa25.15■■□□□ 1.62
SLC44A3-201ENST00000271227 PELP1Q8IZL8 1130 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms