RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 RAPGEF6Q8TEU7 1601 aa33.69■■■□□ 2.98
SH3GL1-201ENST00000269886 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
SH3GL1-201ENST00000269886 ROCK1Q13464 1354 aa33.68■■■□□ 2.98
SH3GL1-201ENST00000269886 TSHZ2Q9NRE2 1034 aa33.67■■■□□ 2.98
SH3GL1-201ENST00000269886 DNMT1P26358 1616 aaKnown RBP33.66■■■□□ 2.98
SH3GL1-201ENST00000269886 EIF4G2P78344 907 aaKnown RBP eCLIP33.65■■■□□ 2.987e-8■■■■□ 19.8
SH3GL1-201ENST00000269886 CDK11AQ9UQ88 783 aaPredicted RBP33.64■■■□□ 2.98
SH3GL1-201ENST00000269886 ANKRD30BQ9BXX2 1392 aa33.61■■■□□ 2.97
SH3GL1-201ENST00000269886 PRG4Q92954 1404 aaPredicted RBP33.6■■■□□ 2.97
SH3GL1-201ENST00000269886 SLC4A1APQ9BWU0 796 aaKnown RBP33.56■■■□□ 2.96
SH3GL1-201ENST00000269886 NEFLP07196 543 aa33.55■■■□□ 2.96
SH3GL1-201ENST00000269886 CHMP7Q8WUX9 453 aaPredicted RBP33.55■■■□□ 2.96
SH3GL1-201ENST00000269886 RPRD2Q5VT52 1461 aaKnown RBP33.55■■■□□ 2.96
SH3GL1-201ENST00000269886 PLB1Q6P1J6 1458 aa33.54■■■□□ 2.96
SH3GL1-201ENST00000269886 NBPF8Q3BBV2 869 aa33.53■■■□□ 2.96
SH3GL1-201ENST00000269886 TROQ12816 1431 aaPredicted RBP33.53■■■□□ 2.96
SH3GL1-201ENST00000269886 C11orf95C9JLR9 678 aaPredicted RBP33.52■■■□□ 2.96
SH3GL1-201ENST00000269886 FBLN2P98095 1184 aa33.51■■■□□ 2.96
SH3GL1-201ENST00000269886 CFDP1Q9UEE9 299 aaPredicted RBP33.51■■■□□ 2.96
SH3GL1-201ENST00000269886 CEP170Q5SW79 1584 aa33.51■■■□□ 2.96
SH3GL1-201ENST00000269886 CAMSAP2Q08AD1 1489 aa33.49■■■□□ 2.95
SH3GL1-201ENST00000269886 TEX14Q8IWB6 1497 aa33.49■■■□□ 2.95
SH3GL1-201ENST00000269886 MAGI1Q96QZ7 1491 aaPredicted RBP33.49■■■□□ 2.95
SH3GL1-201ENST00000269886 HNRNPUQ00839 825 aaKnown RBP eCLIP33.48■■■□□ 2.95
SH3GL1-201ENST00000269886 ZNF777Q9ULD5 760 aaPredicted RBP33.46■■■□□ 2.95
SH3GL1-201ENST00000269886 CNTLNQ9NXG0 1405 aa33.46■■■□□ 2.95
SH3GL1-201ENST00000269886 SYNJ2O15056 1496 aa33.45■■■□□ 2.94
SH3GL1-201ENST00000269886 GPATCH8Q9UKJ3 1502 aaKnown RBP33.44■■■□□ 2.94
SH3GL1-201ENST00000269886 NCOA1Q15788 1441 aa33.44■■■□□ 2.94
SH3GL1-201ENST00000269886 CCDC7Q96M83 1385 aa33.43■■■□□ 2.94
SH3GL1-201ENST00000269886 KIF14Q15058 1648 aa33.43■■■□□ 2.94
SH3GL1-201ENST00000269886 MYT1Q01538 1121 aa33.42■■■□□ 2.94
SH3GL1-201ENST00000269886 PZPP20742 1482 aa33.41■■■□□ 2.94
SH3GL1-201ENST00000269886 CCDC184Q52MB2 194 aa33.39■■■□□ 2.94
SH3GL1-201ENST00000269886 JPH4Q96JJ6 628 aa33.39■■■□□ 2.94
SH3GL1-201ENST00000269886 ITSN2Q9NZM3 1697 aa33.38■■■□□ 2.93
SH3GL1-201ENST00000269886 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
SH3GL1-201ENST00000269886 ADCY10Q96PN6 1610 aa33.33■■■□□ 2.93
SH3GL1-201ENST00000269886 SPATA31E1Q6ZUB1 1445 aa33.32■■■□□ 2.93
SH3GL1-201ENST00000269886 PRKRIP1Q9H875 184 aaPredicted RBP33.32■■■□□ 2.92
SH3GL1-201ENST00000269886 ADGBQ8N7X0 1667 aa33.32■■■□□ 2.92
SH3GL1-201ENST00000269886 NUP160Q12769 1436 aa33.3■■■□□ 2.92
SH3GL1-201ENST00000269886 KIF7Q2M1P5 1343 aa33.29■■■□□ 2.92
SH3GL1-201ENST00000269886 ADGRL2O95490 1459 aa33.29■■■□□ 2.92
SH3GL1-201ENST00000269886 CROCC2H7BZ55 1655 aa33.26■■■□□ 2.92
SH3GL1-201ENST00000269886 ANKRD30AQ9BXX3 1397 aa33.25■■■□□ 2.91
SH3GL1-201ENST00000269886 KIAA1107Q9UPP5 1409 aa33.25■■■□□ 2.91
SH3GL1-201ENST00000269886 PKD2Q13563 968 aa33.25■■■□□ 2.91
SH3GL1-201ENST00000269886 PLEKHD1A6NEE1 506 aa33.23■■■□□ 2.91
SH3GL1-201ENST00000269886 FAM9BQ8IZU0 186 aa33.21■■■□□ 2.91
SH3GL1-201ENST00000269886 ANKRD50Q9ULJ7 1429 aa33.2■■■□□ 2.91
SH3GL1-201ENST00000269886 ZNF326Q5BKZ1 582 aaKnown RBP33.2■■■□□ 2.9
SH3GL1-201ENST00000269886 MRS2Q9HD23 443 aa33.2■■■□□ 2.9
SH3GL1-201ENST00000269886 MBD5Q9P267 1494 aa33.18■■■□□ 2.9
SH3GL1-201ENST00000269886 IRX6P78412 446 aaPredicted RBP33.18■■■□□ 2.9
SH3GL1-201ENST00000269886 ATP10BO94823 1461 aa33.17■■■□□ 2.9
SH3GL1-201ENST00000269886 ABCA8O94911 1581 aa33.17■■■□□ 2.9
SH3GL1-201ENST00000269886 CDC42BPAQ5VT25 1732 aa33.16■■■□□ 2.9
SH3GL1-201ENST00000269886 POLR1AO95602 1720 aaPredicted RBP33.15■■■□□ 2.9
SH3GL1-201ENST00000269886 ABCC10Q5T3U5 1492 aa33.15■■■□□ 2.9
SH3GL1-201ENST00000269886 C9orf84Q5VXU9 1444 aa33.1■■■□□ 2.89
SH3GL1-201ENST00000269886 NUP155O75694 1391 aa33.1■■■□□ 2.89
SH3GL1-201ENST00000269886 USP47Q96K76 1375 aa33.09■■■□□ 2.89
SH3GL1-201ENST00000269886 POLR3GLQ9BT43 218 aa33.06■■■□□ 2.88
SH3GL1-201ENST00000269886 RBM19Q9Y4C8 960 aaKnown RBP33.05■■■□□ 2.88
SH3GL1-201ENST00000269886 SHANK2Q9UPX8 1470 aa33.05■■■□□ 2.88
SH3GL1-201ENST00000269886 BCORL1Q5H9F3 1711 aa33.04■■■□□ 2.88
SH3GL1-201ENST00000269886 TSPY4P0CV99 314 aa33.04■■■□□ 2.88
SH3GL1-201ENST00000269886 TSPY10P0CW01 314 aa33.04■■■□□ 2.88
SH3GL1-201ENST00000269886 HNRNPMP52272 730 aaKnown RBP eCLIP33.04■■■□□ 2.882e-6■□□□□ 10.2
SH3GL1-201ENST00000269886 CNGB1Q14028 1251 aaPredicted RBP33.03■■■□□ 2.88
SH3GL1-201ENST00000269886 DHX29Q7Z478 1369 aaKnown RBP33■■■□□ 2.87
SH3GL1-201ENST00000269886 ZBED9Q6R2W3 1325 aa33■■■□□ 2.87
SH3GL1-201ENST00000269886 KDM5CP41229 1560 aa32.98■■■□□ 2.87
SH3GL1-201ENST00000269886 KIF15Q9NS87 1388 aa32.96■■■□□ 2.87
SH3GL1-201ENST00000269886 PTPRGP23470 1445 aa32.94■■■□□ 2.86
SH3GL1-201ENST00000269886 UHRF1BP1Q6BDS2 1440 aa32.94■■■□□ 2.86
SH3GL1-201ENST00000269886 KDM2AQ9Y2K7 1162 aa32.92■■■□□ 2.86
SH3GL1-201ENST00000269886 KDM5DQ9BY66 1539 aa32.91■■■□□ 2.86
SH3GL1-201ENST00000269886 CARD11Q9BXL7 1154 aa32.9■■■□□ 2.86
SH3GL1-201ENST00000269886 RALGAPBQ86X10 1494 aa32.9■■■□□ 2.86
SH3GL1-201ENST00000269886 CHD1O14646 1710 aa32.89■■■□□ 2.86
SH3GL1-201ENST00000269886 ARHGEF5Q12774 1597 aa32.88■■■□□ 2.85
SH3GL1-201ENST00000269886 ANP32EQ9BTT0 268 aa32.87■■■□□ 2.85
SH3GL1-201ENST00000269886 ARID4BQ4LE39 1312 aaPredicted RBP32.86■■■□□ 2.85
SH3GL1-201ENST00000269886 ARHGEF12Q9NZN5 1544 aa32.85■■■□□ 2.85
SH3GL1-201ENST00000269886 DCAF11Q8TEB1 546 aa32.85■■■□□ 2.85
SH3GL1-201ENST00000269886 SAMD9LQ8IVG5 1584 aa32.84■■■□□ 2.85
SH3GL1-201ENST00000269886 ERICH6BQ5W0A0 696 aa32.84■■■□□ 2.85
SH3GL1-201ENST00000269886 CDC42BPBQ9Y5S2 1711 aa32.82■■■□□ 2.84
SH3GL1-201ENST00000269886 PPP4R2Q9NY27 417 aa32.82■■■□□ 2.84
SH3GL1-201ENST00000269886 CCDC141Q6ZP82 1450 aa32.81■■■□□ 2.84
SH3GL1-201ENST00000269886 ST20-MTHFSA0A0A6YYL1 179 aa32.8■■■□□ 2.84
SH3GL1-201ENST00000269886 PREX2Q70Z35 1606 aa32.78■■■□□ 2.84
SH3GL1-201ENST00000269886 ROCK2O75116 1388 aaKnown RBP32.76■■■□□ 2.83
SH3GL1-201ENST00000269886 FAM135AQ9P2D6 1515 aa32.76■■■□□ 2.83
SH3GL1-201ENST00000269886 RSPH4AQ5TD94 716 aa32.72■■■□□ 2.83
SH3GL1-201ENST00000269886 SENP3-EIF4A1A0A087X0R7 540 aa32.71■■■□□ 2.83
SH3GL1-201ENST00000269886 SYCP2Q9BX26 1530 aa32.7■■■□□ 2.82
SH3GL1-201ENST00000269886 B4GALNT3Q6L9W6 998 aa32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms